Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU6-820P-201ENST00000384273 107 ntBASIC-2.08□□□□□ -2.74
CCDC136Q96JN2 RNU6-598P-201ENST00000364017 105 ntBASIC-2.09□□□□□ -2.74
CCDC136Q96JN2 RNU6-119P-201ENST00000364882 107 ntBASIC-2.09□□□□□ -2.74
CCDC136Q96JN2 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.1□□□□□ -2.75
CCDC136Q96JN2 SNORD115-31-201ENST00000365318 82 ntBASIC-2.1□□□□□ -2.75
CCDC136Q96JN2 SNORD116-24-201ENST00000384549 92 ntBASIC-2.11□□□□□ -2.75
CCDC136Q96JN2 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.12□□□□□ -2.75
CCDC136Q96JN2 RNU6-980P-201ENST00000516925 103 ntBASIC-2.12□□□□□ -2.75
CCDC136Q96JN2 RNA5SP173-201ENST00000364857 136 ntBASIC-2.13□□□□□ -2.75
CCDC136Q96JN2 MIR3139-201ENST00000579145 76 ntBASIC-2.13□□□□□ -2.75
CCDC136Q96JN2 U2.18-201ENST00000622185 84 ntBASIC-2.13□□□□□ -2.75
CCDC136Q96JN2 RNU6-79P-201ENST00000362511 107 ntBASIC-2.14□□□□□ -2.75
CCDC136Q96JN2 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.14□□□□□ -2.75
CCDC136Q96JN2 AC018880.2-201ENST00000414265 201 ntBASIC-2.15□□□□□ -2.75
CCDC136Q96JN2 SNORD116-16-201ENST00000384533 92 ntBASIC-2.16□□□□□ -2.76
CCDC136Q96JN2 RNA5SP170-201ENST00000517150 101 ntBASIC-2.16□□□□□ -2.76
CCDC136Q96JN2 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.17□□□□□ -2.76
CCDC136Q96JN2 SNORA41B-201ENST00000384785 128 ntBASIC-2.17□□□□□ -2.76
CCDC136Q96JN2 RNU6-400P-201ENST00000391173 106 ntBASIC-2.17□□□□□ -2.76
CCDC136Q96JN2 RNU6-687P-201ENST00000516443 89 ntBASIC-2.17□□□□□ -2.76
CCDC136Q96JN2 MIR664B-201ENST00000626756 61 ntBASIC-2.17□□□□□ -2.76
CCDC136Q96JN2 RNU6-1298P-201ENST00000362456 101 ntBASIC-2.18□□□□□ -2.76
CCDC136Q96JN2 RNU6-608P-201ENST00000383927 104 ntBASIC-2.18□□□□□ -2.76
CCDC136Q96JN2 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.18□□□□□ -2.76
CCDC136Q96JN2 RNA5SP93-201ENST00000362525 114 ntBASIC-2.19□□□□□ -2.76
CCDC136Q96JN2 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.21□□□□□ -2.76
CCDC136Q96JN2 RNU6-630P-201ENST00000391258 106 ntBASIC-2.21□□□□□ -2.76
CCDC136Q96JN2 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.22□□□□□ -2.76
CCDC136Q96JN2 MIR520D-201ENST00000385002 87 ntBASIC-2.22□□□□□ -2.76
CCDC136Q96JN2 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.24□□□□□ -2.77
CCDC136Q96JN2 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.24□□□□□ -2.77
CCDC136Q96JN2 RNU6-411P-201ENST00000384451 107 ntBASIC-2.24□□□□□ -2.77
CCDC136Q96JN2 MT-TM-201ENST00000387377 68 ntBASIC-2.24□□□□□ -2.77
CCDC136Q96JN2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.24□□□□□ -2.77
CCDC136Q96JN2 SNORD73B-201ENST00000364394 72 ntBASIC-2.25□□□□□ -2.77
CCDC136Q96JN2 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.25□□□□□ -2.77
CCDC136Q96JN2 SNORD1B-201ENST00000363091 84 ntBASIC-2.27□□□□□ -2.77
CCDC136Q96JN2 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.27□□□□□ -2.77
CCDC136Q96JN2 U7.4-201ENST00000614961 63 ntBASIC-2.27□□□□□ -2.77
CCDC136Q96JN2 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.28□□□□□ -2.77
CCDC136Q96JN2 RNA5SP405-201ENST00000363059 114 ntBASIC-2.29□□□□□ -2.78
CCDC136Q96JN2 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.3□□□□□ -2.78
CCDC136Q96JN2 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.31□□□□□ -2.78
CCDC136Q96JN2 SNORD54-201ENST00000459159 67 ntBASIC-2.31□□□□□ -2.78
CCDC136Q96JN2 MIR548AA1-201ENST00000384971 97 ntBASIC-2.32□□□□□ -2.78
CCDC136Q96JN2 RNU6-695P-201ENST00000391157 104 ntBASIC-2.32□□□□□ -2.78
CCDC136Q96JN2 MIR3202-2-201ENST00000635980 79 ntBASIC-2.32□□□□□ -2.78
CCDC136Q96JN2 RNY4P7-201ENST00000364600 96 ntBASIC-2.33□□□□□ -2.78
CCDC136Q96JN2 RNU6-563P-201ENST00000364872 108 ntBASIC-2.34□□□□□ -2.78
CCDC136Q96JN2 RNU6-573P-201ENST00000383938 106 ntBASIC-2.34□□□□□ -2.78
CCDC136Q96JN2 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.34□□□□□ -2.78
CCDC136Q96JN2 RNY4P29-201ENST00000410801 97 ntBASIC-2.35□□□□□ -2.79
CCDC136Q96JN2 RNU6-542P-201ENST00000516405 103 ntBASIC-2.35□□□□□ -2.79
CCDC136Q96JN2 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.36□□□□□ -2.79
CCDC136Q96JN2 AC120024.2-201ENST00000576526 175 ntBASIC-2.36□□□□□ -2.79
CCDC136Q96JN2 MIR3170-201ENST00000582699 77 ntBASIC-2.36□□□□□ -2.79
CCDC136Q96JN2 RNU6-1124P-201ENST00000384169 107 ntBASIC-2.37□□□□□ -2.79
CCDC136Q96JN2 SNORA26.2-201ENST00000390922 122 ntBASIC-2.37□□□□□ -2.79
CCDC136Q96JN2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.38□□□□□ -2.79
CCDC136Q96JN2 Y_RNA.388-201ENST00000383919 113 ntBASIC-2.39□□□□□ -2.79
CCDC136Q96JN2 RNU6-634P-201ENST00000459134 106 ntBASIC-2.39□□□□□ -2.79
CCDC136Q96JN2 MIR23C-201ENST00000579846 100 ntBASIC-2.39□□□□□ -2.79
CCDC136Q96JN2 MIR3123-201ENST00000583417 75 ntBASIC-2.39□□□□□ -2.79
CCDC136Q96JN2 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.4□□□□□ -2.79
CCDC136Q96JN2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.4□□□□□ -2.79
CCDC136Q96JN2 Y_RNA.545-201ENST00000384652 105 ntBASIC-2.41□□□□□ -2.8
CCDC136Q96JN2 RNU6-172P-201ENST00000411000 93 ntBASIC-2.41□□□□□ -2.8
CCDC136Q96JN2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.41□□□□□ -2.8
CCDC136Q96JN2 RNU6-194P-201ENST00000363862 105 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 RNU6-258P-201ENST00000390884 101 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 MIR1255A-201ENST00000408338 113 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 RNU4-88P-201ENST00000411220 86 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 RNU6-92P-201ENST00000605893 104 ntBASIC-2.42□□□□□ -2.8
CCDC136Q96JN2 RNU6-247P-201ENST00000362636 107 ntBASIC-2.43□□□□□ -2.8
CCDC136Q96JN2 MIR579-201ENST00000385221 98 ntBASIC-2.43□□□□□ -2.8
CCDC136Q96JN2 RNU6-663P-201ENST00000391105 106 ntBASIC-2.43□□□□□ -2.8
CCDC136Q96JN2 RNU7-151P-201ENST00000516930 53 ntBASIC-2.43□□□□□ -2.8
CCDC136Q96JN2 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.44□□□□□ -2.8
CCDC136Q96JN2 RNU6-841P-201ENST00000383872 107 ntBASIC-2.44□□□□□ -2.8
CCDC136Q96JN2 RNU6-995P-201ENST00000391244 107 ntBASIC-2.44□□□□□ -2.8
CCDC136Q96JN2 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.45□□□□□ -2.8
CCDC136Q96JN2 RNU6-857P-201ENST00000515893 110 ntBASIC-2.45□□□□□ -2.8
CCDC136Q96JN2 MIR548AM-201ENST00000584298 74 ntBASIC-2.45□□□□□ -2.8
CCDC136Q96JN2 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.46□□□□□ -2.8
CCDC136Q96JN2 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.48□□□□□ -2.81
CCDC136Q96JN2 RNU6-1191P-201ENST00000516799 107 ntBASIC-2.49□□□□□ -2.81
CCDC136Q96JN2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.49□□□□□ -2.81
CCDC136Q96JN2 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.5□□□□□ -2.81
CCDC136Q96JN2 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.5□□□□□ -2.81
CCDC136Q96JN2 RNU6-523P-201ENST00000516304 54 ntBASIC-2.5□□□□□ -2.81
CCDC136Q96JN2 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.5□□□□□ -2.81
CCDC136Q96JN2 Y_RNA.43-201ENST00000362670 111 ntBASIC-2.51□□□□□ -2.81
CCDC136Q96JN2 RNU6-279P-201ENST00000391297 101 ntBASIC-2.51□□□□□ -2.81
CCDC136Q96JN2 SNORD60.1-201ENST00000362451 73 ntBASIC-2.52□□□□□ -2.81
CCDC136Q96JN2 AC013734.1-201ENST00000619329 111 ntBASIC-2.52□□□□□ -2.81
CCDC136Q96JN2 SNORD30.1-201ENST00000391309 70 ntBASIC-2.54□□□□□ -2.82
CCDC136Q96JN2 MIR7978-201ENST00000636158 59 ntBASIC-2.54□□□□□ -2.82
CCDC136Q96JN2 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.55□□□□□ -2.82
CCDC136Q96JN2 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.55□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms