Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.97□□□□□ -2.56
RTL3Q8N8U3 RNU6-172P-201ENST00000411000 93 ntBASIC-0.97□□□□□ -2.56
RTL3Q8N8U3 RNU6-122P-201ENST00000516818 107 ntBASIC-0.97□□□□□ -2.56
RTL3Q8N8U3 MIR3170-201ENST00000582699 77 ntBASIC-0.97□□□□□ -2.56
RTL3Q8N8U3 RNU6-608P-201ENST00000383927 104 ntBASIC-0.98□□□□□ -2.57
RTL3Q8N8U3 MIR7978-201ENST00000636158 59 ntBASIC-0.99□□□□□ -2.57
RTL3Q8N8U3 RNA5SP192-201ENST00000364404 120 ntBASIC-1□□□□□ -2.57
RTL3Q8N8U3 RNU6-800P-201ENST00000384473 103 ntBASIC-1□□□□□ -2.57
RTL3Q8N8U3 RNU7-151P-201ENST00000516930 53 ntBASIC-1□□□□□ -2.57
RTL3Q8N8U3 MTRNR2L9-201ENST00000622562 75 ntBASIC-1□□□□□ -2.57
RTL3Q8N8U3 MIR198-201ENST00000637333 62 ntBASIC-1□□□□□ -2.57
RTL3Q8N8U3 MIR125B1-201ENST00000385236 88 ntBASIC-1.01□□□□□ -2.57
RTL3Q8N8U3 MIR601-201ENST00000385256 79 ntBASIC-1.01□□□□□ -2.57
RTL3Q8N8U3 AC090616.4-201ENST00000448026 115 ntBASIC-1.01□□□□□ -2.57
RTL3Q8N8U3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
RTL3Q8N8U3 Y_RNA.386-201ENST00000383913 105 ntBASIC-1.02□□□□□ -2.57
RTL3Q8N8U3 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.02□□□□□ -2.57
RTL3Q8N8U3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RNU6-1296P-201ENST00000383879 107 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RNU6-995P-201ENST00000391244 107 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RNU7-160P-201ENST00000516660 62 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RNU6-231P-201ENST00000517122 103 ntBASIC-1.03□□□□□ -2.57
RTL3Q8N8U3 RNU6-940P-201ENST00000363433 104 ntBASIC-1.04□□□□□ -2.58
RTL3Q8N8U3 MIR4723-201ENST00000585070 81 ntBASIC-1.04□□□□□ -2.58
RTL3Q8N8U3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.05□□□□□ -2.58
RTL3Q8N8U3 AC114801.3-201ENST00000510231 177 ntBASIC-1.05□□□□□ -2.58
RTL3Q8N8U3 MIR7110-201ENST00000612638 86 ntBASIC-1.05□□□□□ -2.58
RTL3Q8N8U3 RNU6-669P-201ENST00000365575 107 ntBASIC-1.06□□□□□ -2.58
RTL3Q8N8U3 MIR579-201ENST00000385221 98 ntBASIC-1.06□□□□□ -2.58
RTL3Q8N8U3 AC110620.1-201ENST00000416042 228 ntBASIC-1.06□□□□□ -2.58
RTL3Q8N8U3 RNU6-638P-201ENST00000516582 104 ntBASIC-1.06□□□□□ -2.58
RTL3Q8N8U3 RNU6-471P-201ENST00000383944 106 ntBASIC-1.07□□□□□ -2.58
RTL3Q8N8U3 RNU6-258P-201ENST00000390884 101 ntBASIC-1.07□□□□□ -2.58
RTL3Q8N8U3 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.07□□□□□ -2.58
RTL3Q8N8U3 MIR378F-201ENST00000578143 78 ntBASIC-1.07□□□□□ -2.58
RTL3Q8N8U3 MIR23C-201ENST00000579846 100 ntBASIC-1.07□□□□□ -2.58
RTL3Q8N8U3 RNU6-247P-201ENST00000362636 107 ntBASIC-1.08□□□□□ -2.58
RTL3Q8N8U3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.1□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 SNORA27.2-201ENST00000363365 126 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 SNORA40B-201ENST00000385573 128 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 RNU7-119P-201ENST00000459279 63 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 MIR4306-201ENST00000583390 91 ntBASIC-1.11□□□□□ -2.59
RTL3Q8N8U3 RNU6-810P-201ENST00000364001 107 ntBASIC-1.12□□□□□ -2.59
RTL3Q8N8U3 SNORD63.2-201ENST00000516303 64 ntBASIC-1.12□□□□□ -2.59
RTL3Q8N8U3 SNORA40.16-201ENST00000517238 121 ntBASIC-1.12□□□□□ -2.59
RTL3Q8N8U3 MIR3938-201ENST00000582157 103 ntBASIC-1.12□□□□□ -2.59
RTL3Q8N8U3 AC091912.2-201ENST00000624798 167 ntBASIC-1.12□□□□□ -2.59
RTL3Q8N8U3 RNU6-79P-201ENST00000362511 107 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 SNORD116.2-201ENST00000391251 93 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 AC018880.2-201ENST00000414265 201 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 MIR3165-201ENST00000579874 75 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 MIR466-201ENST00000580653 84 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 U4.2-201ENST00000618561 85 ntBASIC-1.13□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.14□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.14□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.14□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.14□□□□□ -2.59
RTL3Q8N8U3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.14□□□□□ -2.59
RTL3Q8N8U3 RNU6-828P-201ENST00000364876 107 ntBASIC-1.15□□□□□ -2.59
RTL3Q8N8U3 RNU6-520P-201ENST00000384717 104 ntBASIC-1.15□□□□□ -2.59
RTL3Q8N8U3 RNU6-1206P-201ENST00000516339 103 ntBASIC-1.15□□□□□ -2.59
RTL3Q8N8U3 MIR3115-201ENST00000577915 68 ntBASIC-1.16□□□□□ -2.6
RTL3Q8N8U3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.16□□□□□ -2.6
RTL3Q8N8U3 RNU6-974P-201ENST00000384099 108 ntBASIC-1.17□□□□□ -2.6
RTL3Q8N8U3 MIR6874-201ENST00000635894 71 ntBASIC-1.17□□□□□ -2.6
RTL3Q8N8U3 RNA5SP461-201ENST00000516451 104 ntBASIC-1.18□□□□□ -2.6
RTL3Q8N8U3 RNU6-400P-201ENST00000391173 106 ntBASIC-1.19□□□□□ -2.6
RTL3Q8N8U3 MIR6502-201ENST00000617296 76 ntBASIC-1.19□□□□□ -2.6
RTL3Q8N8U3 AC120024.2-201ENST00000576526 175 ntBASIC-1.21□□□□□ -2.6
RTL3Q8N8U3 AC138207.3-201ENST00000585289 166 ntBASIC-1.21□□□□□ -2.6
RTL3Q8N8U3 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.21□□□□□ -2.6
RTL3Q8N8U3 RNU6-590P-201ENST00000365039 107 ntBASIC-1.22□□□□□ -2.6
RTL3Q8N8U3 MIR8485-201ENST00000401372 91 ntBASIC-1.22□□□□□ -2.6
RTL3Q8N8U3 MIR365A-201ENST00000362260 87 ntBASIC-1.23□□□□□ -2.61
RTL3Q8N8U3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
RTL3Q8N8U3 MIR1207-201ENST00000408249 87 ntBASIC-1.23□□□□□ -2.61
RTL3Q8N8U3 RNU6-563P-201ENST00000364872 108 ntBASIC-1.25□□□□□ -2.61
RTL3Q8N8U3 SNORD114-3-201ENST00000364969 75 ntBASIC-1.25□□□□□ -2.61
RTL3Q8N8U3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.26□□□□□ -2.61
RTL3Q8N8U3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.26□□□□□ -2.61
RTL3Q8N8U3 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.26□□□□□ -2.61
RTL3Q8N8U3 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.27□□□□□ -2.61
RTL3Q8N8U3 AL451105.1-201ENST00000450005 189 ntBASIC-1.27□□□□□ -2.61
RTL3Q8N8U3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
RTL3Q8N8U3 RNU6-419P-201ENST00000517030 63 ntBASIC-1.27□□□□□ -2.61
RTL3Q8N8U3 RNY3P8-201ENST00000411366 126 ntBASIC-1.28□□□□□ -2.61
RTL3Q8N8U3 AC013734.1-201ENST00000619329 111 ntBASIC-1.28□□□□□ -2.61
RTL3Q8N8U3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.29□□□□□ -2.62
RTL3Q8N8U3 MIR4441-201ENST00000582623 100 ntBASIC-1.29□□□□□ -2.62
RTL3Q8N8U3 RNU6-446P-201ENST00000362827 106 ntBASIC-1.3□□□□□ -2.62
RTL3Q8N8U3 SNORD45.2-201ENST00000363552 72 ntBASIC-1.32□□□□□ -2.62
RTL3Q8N8U3 RNU6-361P-201ENST00000364454 107 ntBASIC-1.32□□□□□ -2.62
RTL3Q8N8U3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
RTL3Q8N8U3 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
RTL3Q8N8U3 MIR4770-201ENST00000579149 58 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms