Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 U6.97-201ENST00000636904 101 ntBASIC-3.12□□□□□ -2.91
SSX9Q7RTT3 RNU6-669P-201ENST00000365575 107 ntBASIC-3.13□□□□□ -2.91
SSX9Q7RTT3 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.13□□□□□ -2.91
SSX9Q7RTT3 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.14□□□□□ -2.91
SSX9Q7RTT3 RNU6-172P-201ENST00000411000 93 ntBASIC-3.15□□□□□ -2.91
SSX9Q7RTT3 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.15□□□□□ -2.91
SSX9Q7RTT3 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 AC005520.4-201ENST00000604337 90 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.17□□□□□ -2.92
SSX9Q7RTT3 RNU6-675P-201ENST00000384236 104 ntBASIC-3.18□□□□□ -2.92
SSX9Q7RTT3 RNU6-794P-201ENST00000517261 64 ntBASIC-3.18□□□□□ -2.92
SSX9Q7RTT3 MIR7978-201ENST00000636158 59 ntBASIC-3.19□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.21□□□□□ -2.92
SSX9Q7RTT3 RNU6-81P-201ENST00000365608 104 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 RNU6-209P-201ENST00000384118 107 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.22□□□□□ -2.92
SSX9Q7RTT3 RNU6-315P-201ENST00000362666 107 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 SNORD18C-201ENST00000362704 69 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.273-201ENST00000364703 102 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 MIR488-201ENST00000365739 83 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-1168P-201ENST00000390831 104 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNY3P8-201ENST00000411366 126 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-844P-201ENST00000517175 102 ntBASIC-3.23□□□□□ -2.93
SSX9Q7RTT3 RNU6-523P-201ENST00000516304 54 ntBASIC-3.24□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 RNU6-895P-201ENST00000384125 103 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 MIR125B1-201ENST00000385236 88 ntBASIC-3.26□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.313-201ENST00000365095 103 ntBASIC-3.27□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 MIR154-201ENST00000385243 84 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 RNU6-789P-201ENST00000517105 102 ntBASIC-3.28□□□□□ -2.93
SSX9Q7RTT3 Y_RNA.17-201ENST00000362433 111 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-230P-201ENST00000362457 104 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-22P-201ENST00000384355 107 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 RNU6-141P-201ENST00000410499 105 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 snoMBII-202.2-201ENST00000517263 86 ntBASIC-3.29□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.3□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.3□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 RNU6-974P-201ENST00000384099 108 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 SNORD116-24-201ENST00000384549 92 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.31□□□□□ -2.94
SSX9Q7RTT3 RNU6-1134P-201ENST00000365156 101 ntBASIC-3.32□□□□□ -2.94
SSX9Q7RTT3 RNU6-70P-201ENST00000516438 60 ntBASIC-3.32□□□□□ -2.94
SSX9Q7RTT3 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-640P-201ENST00000363693 105 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-1117P-201ENST00000384525 104 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 RNU6-1154P-201ENST00000391001 104 ntBASIC-3.33□□□□□ -2.94
SSX9Q7RTT3 IGLL4P-201ENST00000614590 133 ntBASIC-3.34□□□□□ -2.94
SSX9Q7RTT3 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNY1P1-201ENST00000364372 112 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-32P-201ENST00000383948 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-13P-201ENST00000384248 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-12P-201ENST00000384604 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 RNU6-41P-201ENST00000384741 107 ntBASIC-3.35□□□□□ -2.95
SSX9Q7RTT3 TMSB4XP3-201ENST00000445144 114 ntBASIC-3.36□□□□□ -2.95
SSX9Q7RTT3 RNU6-520P-201ENST00000384717 104 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 MIR581-201ENST00000384895 96 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 RNU6-313P-201ENST00000516317 112 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 RNU7-160P-201ENST00000516660 62 ntBASIC-3.37□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 RNU6-542P-201ENST00000516405 103 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 RNU6-92P-201ENST00000605893 104 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-3.38□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.593-201ENST00000410292 98 ntBASIC-3.39□□□□□ -2.95
SSX9Q7RTT3 MIR5588-201ENST00000581890 63 ntBASIC-3.4□□□□□ -2.95
SSX9Q7RTT3 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 SNORD113-3-201ENST00000364830 72 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 SNORD60-201ENST00000383903 83 ntBASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.41□□□□□ -2.96
SSX9Q7RTT3 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.42□□□□□ -2.96
SSX9Q7RTT3 RNU6-828P-201ENST00000364876 107 ntBASIC-3.42□□□□□ -2.96
SSX9Q7RTT3 MIR7110-201ENST00000612638 86 ntBASIC-3.43□□□□□ -2.96
SSX9Q7RTT3 RNU6-649P-201ENST00000384463 107 ntBASIC-3.44□□□□□ -2.96
SSX9Q7RTT3 MIR548AI-201ENST00000579940 88 ntBASIC-3.44□□□□□ -2.96
SSX9Q7RTT3 MIR202-201ENST00000362219 110 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 RNU6-979P-201ENST00000383896 107 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 MIR4712-201ENST00000583750 82 ntBASIC-3.45□□□□□ -2.96
SSX9Q7RTT3 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.46□□□□□ -2.96
SSX9Q7RTT3 MIR1245B-201ENST00000636115 69 ntBASIC-3.46□□□□□ -2.96
SSX9Q7RTT3 MIR548N-201ENST00000408742 75 ntBASIC-3.47□□□□□ -2.96
SSX9Q7RTT3 SNORD60.1-201ENST00000362451 73 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 RNU6-810P-201ENST00000364001 107 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.48□□□□□ -2.97
SSX9Q7RTT3 RNU6-147P-201ENST00000383983 107 ntBASIC-3.49□□□□□ -2.97
SSX9Q7RTT3 RNU6-1121P-201ENST00000516802 109 ntBASIC-3.49□□□□□ -2.97
SSX9Q7RTT3 RNU6-231P-201ENST00000517122 103 ntBASIC-3.5□□□□□ -2.97
SSX9Q7RTT3 snosnR66.1-201ENST00000391095 99 ntBASIC-3.51□□□□□ -2.97
SSX9Q7RTT3 SNORD116.2-201ENST00000391251 93 ntBASIC-3.51□□□□□ -2.97
SSX9Q7RTT3 Y_RNA.566-201ENST00000384735 101 ntBASIC-3.52□□□□□ -2.97
SSX9Q7RTT3 RNU7-171P-201ENST00000459581 62 ntBASIC-3.52□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms