Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU6-68P-201ENST00000516576 104 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 SNORA40.16-201ENST00000517238 121 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL7A1Q02388 MIR4801-201ENST00000582704 82 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 MIR4317-201ENST00000637586 65 ntBASIC-0.64□□□□□ -2.51
COL7A1Q02388 RNU6-854P-201ENST00000364036 107 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-300P-201ENST00000459080 104 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 MTATP8P1-201ENST00000467115 207 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 U7.3-201ENST00000616123 62 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 MIR1302-1-201ENST00000637932 143 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-411P-201ENST00000384451 107 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 MIR548F4-201ENST00000408515 105 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.612-201ENST00000410717 95 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNU6-659P-201ENST00000516454 104 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.63-201ENST00000362841 102 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 SNORA25.5-201ENST00000363782 126 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 RNA5SP173-201ENST00000364857 136 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 SNORD116-21-201ENST00000384507 92 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.65□□□□□ -2.51
COL7A1Q02388 MIR548AI-201ENST00000579940 88 ntBASIC-0.65□□□□□ -2.51
COL7A1Q02388 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.66□□□□□ -2.51
COL7A1Q02388 RNU7-171P-201ENST00000459581 62 ntBASIC-0.66□□□□□ -2.51
COL7A1Q02388 RNU6-844P-201ENST00000517175 102 ntBASIC-0.66□□□□□ -2.51
COL7A1Q02388 AC004792.1-201ENST00000614523 137 ntBASIC-0.66□□□□□ -2.51
COL7A1Q02388 SNORD58C-201ENST00000365223 64 ntBASIC-0.66□□□□□ -2.52
COL7A1Q02388 SNORD116-22-201ENST00000384430 92 ntBASIC-0.66□□□□□ -2.52
COL7A1Q02388 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.66□□□□□ -2.52
COL7A1Q02388 SNORA17.4-201ENST00000391287 132 ntBASIC-0.66□□□□□ -2.52
COL7A1Q02388 RNU6-315P-201ENST00000362666 107 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 Y_RNA.43-201ENST00000362670 111 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 RNU6-379P-201ENST00000363813 104 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.67□□□□□ -2.52
COL7A1Q02388 MIRLET7A2-201ENST00000362105 72 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 MIR606-201ENST00000384851 96 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-402P-201ENST00000410678 103 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 AL117351.2-201ENST00000513571 157 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 AC008737.2-201ENST00000599446 118 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-1161P-201ENST00000516176 102 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-388P-201ENST00000517012 105 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-389P-201ENST00000517048 105 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 U6.95-201ENST00000636931 70 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-828P-201ENST00000364876 107 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-915P-201ENST00000364943 103 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-675P-201ENST00000384236 104 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 MIR590-201ENST00000385008 97 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 MIR568-201ENST00000385036 95 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 MT-TG-201ENST00000387429 68 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 AL589823.1-201ENST00000429577 183 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 RNU6-789P-201ENST00000517105 102 ntBASIC-0.68□□□□□ -2.52
COL7A1Q02388 SNORA63-201ENST00000363450 132 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 RNU6-788P-201ENST00000390967 104 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 MTCYBP9-201ENST00000431021 303 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 AL157777.2-201ENST00000258070 137 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 MIR548S-201ENST00000581352 82 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 AC044792.1-201ENST00000593294 196 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 AC062037.2-201ENST00000610137 73 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 AP000770.2-201ENST00000623694 100 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 MIR3914-2-201ENST00000637339 95 ntBASIC-0.69□□□□□ -2.52
COL7A1Q02388 RNU6-200P-201ENST00000364743 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 SNORA20.1-201ENST00000364790 130 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-804P-201ENST00000384286 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-1340P-201ENST00000384438 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-255P-201ENST00000516957 105 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 MIR4795-201ENST00000584182 89 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.7□□□□□ -2.52
COL7A1Q02388 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-109P-201ENST00000516364 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-184P-201ENST00000516514 107 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 MIR548X-201ENST00000580069 75 ntBASIC-0.7□□□□□ -2.52
COL7A1Q02388 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 U6atac.1-201ENST00000616025 117 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
COL7A1Q02388 MIR1254-1-201ENST00000408257 97 ntBASIC-0.71□□□□□ -2.52
COL7A1Q02388 RNU6-419P-201ENST00000517030 63 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms