Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 SNORD116-14-201ENST00000383894 92 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 SNORD116-17-201ENST00000383929 92 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 SNORD116-15-201ENST00000384445 92 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 SNORD116-24-201ENST00000384549 92 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 SNORD116-19-201ENST00000384729 92 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 RNU6-530P-201ENST00000391180 107 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.27□□□□□ -2.77
FOXA3P55318 SNX3P1Y-201ENST00000615757 176 ntBASIC-2.27□□□□□ -2.77
FOXA3P55318 RNU6-895P-201ENST00000384125 103 ntBASIC-2.28□□□□□ -2.77
FOXA3P55318 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.28□□□□□ -2.77
FOXA3P55318 SNORD54-201ENST00000459159 67 ntBASIC-2.28□□□□□ -2.77
FOXA3P55318 RNU6-92P-201ENST00000605893 104 ntBASIC-2.28□□□□□ -2.77
FOXA3P55318 AC006160.2-201ENST00000637708 154 ntBASIC-2.28□□□□□ -2.77
FOXA3P55318 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.29□□□□□ -2.78
FOXA3P55318 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.29□□□□□ -2.78
FOXA3P55318 SNORD116.2-201ENST00000391251 93 ntBASIC-2.29□□□□□ -2.78
FOXA3P55318 RNU6-1296P-201ENST00000383879 107 ntBASIC-2.3□□□□□ -2.78
FOXA3P55318 MIR379-201ENST00000362218 67 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 MIR154-201ENST00000385243 84 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 RNU6-1206P-201ENST00000516339 103 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 RNU6-231P-201ENST00000517122 103 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 MALAT1.1-201ENST00000618249 95 ntBASIC-2.31□□□□□ -2.78
FOXA3P55318 RNU6-834P-201ENST00000362367 110 ntBASIC-2.32□□□□□ -2.78
FOXA3P55318 SNORD60.1-201ENST00000362451 73 ntBASIC-2.32□□□□□ -2.78
FOXA3P55318 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.32□□□□□ -2.78
FOXA3P55318 RNU6-542P-201ENST00000516405 103 ntBASIC-2.32□□□□□ -2.78
FOXA3P55318 RNU6-230P-201ENST00000362457 104 ntBASIC-2.33□□□□□ -2.78
FOXA3P55318 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.33□□□□□ -2.78
FOXA3P55318 RNU6-70P-201ENST00000516438 60 ntBASIC-2.33□□□□□ -2.78
FOXA3P55318 MIR548AI-201ENST00000579940 88 ntBASIC-2.33□□□□□ -2.78
FOXA3P55318 MIR4426-201ENST00000640330 63 ntBASIC-2.33□□□□□ -2.78
FOXA3P55318 RNU6-68P-201ENST00000516576 104 ntBASIC-2.34□□□□□ -2.78
FOXA3P55318 RNU6-1047P-201ENST00000364418 107 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 Y_RNA.261-201ENST00000364631 102 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 RNY1P5-201ENST00000383890 115 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 RNU6-463P-201ENST00000384340 107 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 AL117351.2-201ENST00000513571 157 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 RNU6-255P-201ENST00000516957 105 ntBASIC-2.35□□□□□ -2.79
FOXA3P55318 MIR450A1-201ENST00000362262 91 ntBASIC-2.36□□□□□ -2.79
FOXA3P55318 RNU6-315P-201ENST00000362666 107 ntBASIC-2.36□□□□□ -2.79
FOXA3P55318 MIR1254-1-201ENST00000408257 97 ntBASIC-2.36□□□□□ -2.79
FOXA3P55318 RNU6-300P-201ENST00000459080 104 ntBASIC-2.36□□□□□ -2.79
FOXA3P55318 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.37□□□□□ -2.79
FOXA3P55318 SNORA40B-201ENST00000385573 128 ntBASIC-2.37□□□□□ -2.79
FOXA3P55318 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.37□□□□□ -2.79
FOXA3P55318 SNORA40.13-201ENST00000516379 120 ntBASIC-2.37□□□□□ -2.79
FOXA3P55318 Y_RNA.129-201ENST00000363392 110 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 SNORD45.2-201ENST00000363552 72 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 RNU6-590P-201ENST00000365039 107 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 Y_RNA.397-201ENST00000383950 98 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 AL031737.1-201ENST00000450125 223 ntBASIC-2.38□□□□□ -2.79
FOXA3P55318 RNU6-675P-201ENST00000384236 104 ntBASIC-2.39□□□□□ -2.79
FOXA3P55318 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-2.39□□□□□ -2.79
FOXA3P55318 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.39□□□□□ -2.79
FOXA3P55318 Y_RNA.320-201ENST00000365144 102 ntBASIC-2.4□□□□□ -2.79
FOXA3P55318 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.4□□□□□ -2.79
FOXA3P55318 RNU6-589P-201ENST00000516485 107 ntBASIC-2.4□□□□□ -2.79
FOXA3P55318 TMSB4XP3-201ENST00000445144 114 ntBASIC-2.41□□□□□ -2.8
FOXA3P55318 RNU6-176P-201ENST00000517196 105 ntBASIC-2.41□□□□□ -2.8
FOXA3P55318 AL451105.1-201ENST00000450005 189 ntBASIC-2.42□□□□□ -2.8
FOXA3P55318 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.42□□□□□ -2.8
FOXA3P55318 Y_RNA.59-201ENST00000362828 102 ntBASIC-2.43□□□□□ -2.8
FOXA3P55318 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.43□□□□□ -2.8
FOXA3P55318 MT-TG-201ENST00000387429 68 ntBASIC-2.43□□□□□ -2.8
FOXA3P55318 RNU6-844P-201ENST00000517175 102 ntBASIC-2.43□□□□□ -2.8
FOXA3P55318 SNORA40.16-201ENST00000517238 121 ntBASIC-2.43□□□□□ -2.8
FOXA3P55318 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.44□□□□□ -2.8
FOXA3P55318 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.44□□□□□ -2.8
FOXA3P55318 Y_RNA.273-201ENST00000364703 102 ntBASIC-2.44□□□□□ -2.8
FOXA3P55318 MIR488-201ENST00000365739 83 ntBASIC-2.44□□□□□ -2.8
FOXA3P55318 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.44□□□□□ -2.8
FOXA3P55318 RNA5SP93-201ENST00000362525 114 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 Y_RNA.63-201ENST00000362841 102 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 RNY4P7-201ENST00000364600 96 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 RNU6-1056P-201ENST00000383996 107 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.46□□□□□ -2.8
FOXA3P55318 AC008267.6-201ENST00000441664 139 ntBASIC-2.47□□□□□ -2.8
FOXA3P55318 RNU6-345P-201ENST00000517001 107 ntBASIC-2.47□□□□□ -2.8
FOXA3P55318 MIR3134-201ENST00000579433 74 ntBASIC-2.47□□□□□ -2.8
FOXA3P55318 IGLL4P-201ENST00000614590 133 ntBASIC-2.47□□□□□ -2.8
FOXA3P55318 RNU6-687P-201ENST00000516443 89 ntBASIC-2.48□□□□□ -2.81
FOXA3P55318 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.48□□□□□ -2.81
FOXA3P55318 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.48□□□□□ -2.81
FOXA3P55318 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 RNY4P25-201ENST00000459254 96 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 RNU7-119P-201ENST00000459279 63 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 MIR5588-201ENST00000581890 63 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 AL365222.1-201ENST00000614661 98 ntBASIC-2.49□□□□□ -2.81
FOXA3P55318 SNORA25.5-201ENST00000363782 126 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 RNU6-742P-201ENST00000365289 107 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 RNU6-1011P-201ENST00000384668 107 ntBASIC-2.5□□□□□ -2.81
FOXA3P55318 RNU6-959P-201ENST00000384671 107 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms