Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.86□□□□□ -2.87
TNFP01375 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.87□□□□□ -2.87
TNFP01375 RNU2-16P-201ENST00000410712 136 ntBASIC-2.87□□□□□ -2.87
TNFP01375 RNU7-119P-201ENST00000459279 63 ntBASIC-2.87□□□□□ -2.87
TNFP01375 RNU6-687P-201ENST00000516443 89 ntBASIC-2.87□□□□□ -2.87
TNFP01375 MIR548X-201ENST00000580069 75 ntBASIC-2.87□□□□□ -2.87
TNFP01375 MIR4317-201ENST00000637586 65 ntBASIC-2.87□□□□□ -2.87
TNFP01375 AL157777.2-201ENST00000258070 137 ntBASIC-2.88□□□□□ -2.87
TNFP01375 RNU6-1325P-201ENST00000364905 105 ntBASIC-2.88□□□□□ -2.87
TNFP01375 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.88□□□□□ -2.87
TNFP01375 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.89□□□□□ -2.87
TNFP01375 RNU6-776P-201ENST00000364403 104 ntBASIC-2.89□□□□□ -2.87
TNFP01375 RNU6-1022P-201ENST00000365049 104 ntBASIC-2.89□□□□□ -2.87
TNFP01375 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.89□□□□□ -2.87
TNFP01375 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.9□□□□□ -2.87
TNFP01375 Y_RNA.197-201ENST00000364004 102 ntBASIC-2.9□□□□□ -2.87
TNFP01375 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.9□□□□□ -2.87
TNFP01375 Y_RNA.565-201ENST00000384719 101 ntBASIC-2.9□□□□□ -2.87
TNFP01375 SNORD116-4-201ENST00000384733 96 ntBASIC-2.9□□□□□ -2.87
TNFP01375 RNU6-907P-201ENST00000390924 102 ntBASIC-2.9□□□□□ -2.87
TNFP01375 MTND3P3-201ENST00000505004 126 ntBASIC-2.9□□□□□ -2.87
TNFP01375 MIR3134-201ENST00000579433 74 ntBASIC-2.9□□□□□ -2.87
TNFP01375 AC006160.2-201ENST00000637708 154 ntBASIC-2.9□□□□□ -2.87
TNFP01375 RNU6-979P-201ENST00000383896 107 ntBASIC-2.91□□□□□ -2.88
TNFP01375 RNU6-1024P-201ENST00000384199 107 ntBASIC-2.91□□□□□ -2.88
TNFP01375 MIR569-201ENST00000385228 96 ntBASIC-2.91□□□□□ -2.88
TNFP01375 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.91□□□□□ -2.88
TNFP01375 SNORD19B-201ENST00000459623 84 ntBASIC-2.91□□□□□ -2.88
TNFP01375 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.91□□□□□ -2.88
TNFP01375 RNU6-255P-201ENST00000516957 105 ntBASIC-2.91□□□□□ -2.88
TNFP01375 RNU6-988P-201ENST00000519081 107 ntBASIC-2.91□□□□□ -2.88
TNFP01375 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.92□□□□□ -2.88
TNFP01375 RNU6-895P-201ENST00000384125 103 ntBASIC-2.92□□□□□ -2.88
TNFP01375 MIR154-201ENST00000385243 84 ntBASIC-2.92□□□□□ -2.88
TNFP01375 RNU6-70P-201ENST00000516438 60 ntBASIC-2.92□□□□□ -2.88
TNFP01375 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.92□□□□□ -2.88
TNFP01375 MIR3914-2-201ENST00000637339 95 ntBASIC-2.92□□□□□ -2.88
TNFP01375 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.93□□□□□ -2.88
TNFP01375 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.93□□□□□ -2.88
TNFP01375 Y_RNA.15-201ENST00000362420 102 ntBASIC-2.94□□□□□ -2.88
TNFP01375 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.95□□□□□ -2.88
TNFP01375 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.95□□□□□ -2.88
TNFP01375 MIR3938-201ENST00000582157 103 ntBASIC-2.95□□□□□ -2.88
TNFP01375 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.95□□□□□ -2.88
TNFP01375 RNU6-315P-201ENST00000362666 107 ntBASIC-2.97□□□□□ -2.88
TNFP01375 MTND4LP9-201ENST00000427694 174 ntBASIC-2.97□□□□□ -2.88
TNFP01375 MIR548AL-201ENST00000578416 97 ntBASIC-2.97□□□□□ -2.88
TNFP01375 RNU6-446P-201ENST00000362827 106 ntBASIC-2.98□□□□□ -2.89
TNFP01375 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.99□□□□□ -2.89
TNFP01375 MIR548X2-201ENST00000579776 100 ntBASIC-2.99□□□□□ -2.89
TNFP01375 RNU6-675P-201ENST00000384236 104 ntBASIC-3□□□□□ -2.89
TNFP01375 MIR4680-201ENST00000580906 66 ntBASIC-3□□□□□ -2.89
TNFP01375 Y_RNA.316-201ENST00000365118 111 ntBASIC-3.01□□□□□ -2.89
TNFP01375 SNORD42.2-201ENST00000365570 69 ntBASIC-3.01□□□□□ -2.89
TNFP01375 SNORD116-22-201ENST00000384430 92 ntBASIC-3.01□□□□□ -2.89
TNFP01375 Y_RNA.712-201ENST00000517011 92 ntBASIC-3.01□□□□□ -2.89
TNFP01375 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.01□□□□□ -2.89
TNFP01375 AC004792.1-201ENST00000614523 137 ntBASIC-3.01□□□□□ -2.89
TNFP01375 Y_RNA.818-201ENST00000618813 71 ntBASIC-3.01□□□□□ -2.89
TNFP01375 MIR1302-1-201ENST00000637932 143 ntBASIC-3.01□□□□□ -2.89
TNFP01375 RNU6-1255P-201ENST00000363434 112 ntBASIC-3.02□□□□□ -2.89
TNFP01375 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.02□□□□□ -2.89
TNFP01375 SNORD113-4-201ENST00000364802 75 ntBASIC-3.02□□□□□ -2.89
TNFP01375 Y_RNA.406-201ENST00000383984 100 ntBASIC-3.02□□□□□ -2.89
TNFP01375 RNU6-59P-201ENST00000384787 107 ntBASIC-3.02□□□□□ -2.89
TNFP01375 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.02□□□□□ -2.89
TNFP01375 Y_RNA.94-201ENST00000363068 106 ntBASIC-3.03□□□□□ -2.89
TNFP01375 RNU6-808P-201ENST00000391233 108 ntBASIC-3.03□□□□□ -2.89
TNFP01375 MIR548F1-201ENST00000408667 84 ntBASIC-3.03□□□□□ -2.89
TNFP01375 RNU6-426P-201ENST00000516464 97 ntBASIC-3.03□□□□□ -2.89
TNFP01375 RNU6-1312P-201ENST00000362425 108 ntBASIC-3.04□□□□□ -2.9
TNFP01375 Y_RNA.20-201ENST00000362479 113 ntBASIC-3.04□□□□□ -2.9
TNFP01375 RNY3P1-201ENST00000365085 102 ntBASIC-3.04□□□□□ -2.9
TNFP01375 RNU6-209P-201ENST00000384118 107 ntBASIC-3.04□□□□□ -2.9
TNFP01375 RNU6-474P-201ENST00000384243 107 ntBASIC-3.04□□□□□ -2.9
TNFP01375 MIR1277-201ENST00000408536 78 ntBASIC-3.04□□□□□ -2.9
TNFP01375 MIR4712-201ENST00000583750 82 ntBASIC-3.04□□□□□ -2.9
TNFP01375 RNU6-986P-201ENST00000363133 102 ntBASIC-3.05□□□□□ -2.9
TNFP01375 Y_RNA.73-201ENST00000362910 113 ntBASIC-3.06□□□□□ -2.9
TNFP01375 Y_RNA.160-201ENST00000363677 92 ntBASIC-3.06□□□□□ -2.9
TNFP01375 SNORA33.2-201ENST00000365413 134 ntBASIC-3.06□□□□□ -2.9
TNFP01375 SNORD116-18-201ENST00000383961 92 ntBASIC-3.06□□□□□ -2.9
TNFP01375 RNU6-394P-201ENST00000410735 107 ntBASIC-3.06□□□□□ -2.9
TNFP01375 RNU6-718P-201ENST00000516166 105 ntBASIC-3.06□□□□□ -2.9
TNFP01375 AL117187.1-201ENST00000555482 181 ntBASIC-3.06□□□□□ -2.9
TNFP01375 RNU6-940P-201ENST00000363433 104 ntBASIC-3.07□□□□□ -2.9
TNFP01375 MIR4511-201ENST00000582784 87 ntBASIC-3.07□□□□□ -2.9
TNFP01375 U4.5-201ENST00000617137 123 ntBASIC-3.07□□□□□ -2.9
TNFP01375 RNU6-663P-201ENST00000391105 106 ntBASIC-3.08□□□□□ -2.9
TNFP01375 RNU6-916P-201ENST00000516088 109 ntBASIC-3.08□□□□□ -2.9
TNFP01375 RNU6-111P-201ENST00000517179 105 ntBASIC-3.08□□□□□ -2.9
TNFP01375 MIR488-201ENST00000365739 83 ntBASIC-3.09□□□□□ -2.9
TNFP01375 Y_RNA.607-201ENST00000410597 98 ntBASIC-3.09□□□□□ -2.9
TNFP01375 MALAT1.1-201ENST00000618249 95 ntBASIC-3.09□□□□□ -2.9
TNFP01375 SNORA25.4-201ENST00000363666 124 ntBASIC-3.1□□□□□ -2.91
TNFP01375 SNORD113-1-201ENST00000365321 69 ntBASIC-3.1□□□□□ -2.91
TNFP01375 RNU6-804P-201ENST00000384286 107 ntBASIC-3.1□□□□□ -2.91
TNFP01375 SNORD116-21-201ENST00000384507 92 ntBASIC-3.1□□□□□ -2.91
TNFP01375 MT-TL1-201ENST00000386347 75 ntBASIC-3.1□□□□□ -2.91
TNFP01375 RNU6-257P-201ENST00000410238 98 ntBASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms