Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 SNORD114-17-201ENST00000364699 75 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 RNU6-458P-201ENST00000384179 107 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 MIR527-201ENST00000385244 85 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 MIR889-201ENST00000401280 79 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 SNORA72.7-201ENST00000516349 94 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 U6.58-201ENST00000613107 107 ntBASIC-0.69□□□□□ -2.52
SIX2Q9NPC8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.7□□□□□ -2.52
SIX2Q9NPC8 RNU6-540P-201ENST00000384622 101 ntBASIC-0.7□□□□□ -2.52
SIX2Q9NPC8 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.71□□□□□ -2.52
SIX2Q9NPC8 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.71□□□□□ -2.52
SIX2Q9NPC8 U7.5-201ENST00000517224 61 ntBASIC-0.71□□□□□ -2.52
SIX2Q9NPC8 MIR429-201ENST00000362106 83 ntBASIC-0.72□□□□□ -2.52
SIX2Q9NPC8 RNU6-663P-201ENST00000391105 106 ntBASIC-0.72□□□□□ -2.52
SIX2Q9NPC8 RNU7-88P-201ENST00000458752 63 ntBASIC-0.72□□□□□ -2.52
SIX2Q9NPC8 RNU6-871P-201ENST00000516122 100 ntBASIC-0.72□□□□□ -2.52
SIX2Q9NPC8 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.73□□□□□ -2.53
SIX2Q9NPC8 SNORA26.4-201ENST00000391188 123 ntBASIC-0.73□□□□□ -2.53
SIX2Q9NPC8 RNU6-542P-201ENST00000516405 103 ntBASIC-0.73□□□□□ -2.53
SIX2Q9NPC8 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.74□□□□□ -2.53
SIX2Q9NPC8 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.74□□□□□ -2.53
SIX2Q9NPC8 RNU6-732P-201ENST00000516033 103 ntBASIC-0.74□□□□□ -2.53
SIX2Q9NPC8 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.74□□□□□ -2.53
SIX2Q9NPC8 MIR4662A-201ENST00000637499 67 ntBASIC-0.74□□□□□ -2.53
SIX2Q9NPC8 SNORD116-16-201ENST00000384533 92 ntBASIC-0.75□□□□□ -2.53
SIX2Q9NPC8 SNORD115-33-201ENST00000363723 82 ntBASIC-0.76□□□□□ -2.53
SIX2Q9NPC8 RNU6-776P-201ENST00000364403 104 ntBASIC-0.76□□□□□ -2.53
SIX2Q9NPC8 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.76□□□□□ -2.53
SIX2Q9NPC8 MIR196A1-201ENST00000388006 70 ntBASIC-0.76□□□□□ -2.53
SIX2Q9NPC8 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.76□□□□□ -2.53
SIX2Q9NPC8 MIR147A-201ENST00000385079 72 ntBASIC-0.77□□□□□ -2.53
SIX2Q9NPC8 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
SIX2Q9NPC8 RNU6-630P-201ENST00000391258 106 ntBASIC-0.77□□□□□ -2.53
SIX2Q9NPC8 SNORD30.1-201ENST00000391309 70 ntBASIC-0.77□□□□□ -2.53
SIX2Q9NPC8 RNA5SP67-201ENST00000516422 131 ntBASIC-0.77□□□□□ -2.53
SIX2Q9NPC8 SNORA41B-201ENST00000384785 128 ntBASIC-0.78□□□□□ -2.53
SIX2Q9NPC8 RNU6-696P-201ENST00000390834 107 ntBASIC-0.78□□□□□ -2.53
SIX2Q9NPC8 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
SIX2Q9NPC8 SNORD63.1-201ENST00000516178 80 ntBASIC-0.78□□□□□ -2.53
SIX2Q9NPC8 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
SIX2Q9NPC8 RNU6-431P-201ENST00000383874 107 ntBASIC-0.79□□□□□ -2.54
SIX2Q9NPC8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.79□□□□□ -2.54
SIX2Q9NPC8 MIR3681-201ENST00000580089 72 ntBASIC-0.79□□□□□ -2.54
SIX2Q9NPC8 SNORA25.4-201ENST00000363666 124 ntBASIC-0.8□□□□□ -2.54
SIX2Q9NPC8 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.8□□□□□ -2.54
SIX2Q9NPC8 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.8□□□□□ -2.54
SIX2Q9NPC8 MIR409-201ENST00000362237 79 ntBASIC-0.81□□□□□ -2.54
SIX2Q9NPC8 RNU6-649P-201ENST00000384463 107 ntBASIC-0.81□□□□□ -2.54
SIX2Q9NPC8 SNORD64-201ENST00000386683 67 ntBASIC-0.81□□□□□ -2.54
SIX2Q9NPC8 AL353691.2-201ENST00000443795 59 ntBASIC-0.81□□□□□ -2.54
SIX2Q9NPC8 RNU6-598P-201ENST00000364017 105 ntBASIC-0.82□□□□□ -2.54
SIX2Q9NPC8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
SIX2Q9NPC8 SNORD19-201ENST00000391191 68 ntBASIC-0.82□□□□□ -2.54
SIX2Q9NPC8 RNU6-539P-201ENST00000516665 103 ntBASIC-0.82□□□□□ -2.54
SIX2Q9NPC8 RNU6-92P-201ENST00000605893 104 ntBASIC-0.82□□□□□ -2.54
SIX2Q9NPC8 SNORD83B-201ENST00000386745 93 ntBASIC-0.83□□□□□ -2.54
SIX2Q9NPC8 SNORD57-201ENST00000448188 72 ntBASIC-0.83□□□□□ -2.54
SIX2Q9NPC8 U6.111-201ENST00000636093 83 ntBASIC-0.83□□□□□ -2.54
SIX2Q9NPC8 AC005520.4-201ENST00000604337 90 ntBASIC-0.84□□□□□ -2.54
SIX2Q9NPC8 AL500527.2-201ENST00000454105 95 ntBASIC-0.85□□□□□ -2.55
SIX2Q9NPC8 U2.18-201ENST00000622185 84 ntBASIC-0.85□□□□□ -2.55
SIX2Q9NPC8 SNORD1B-201ENST00000363091 84 ntBASIC-0.86□□□□□ -2.55
SIX2Q9NPC8 AL627230.5-201ENST00000619807 58 ntBASIC-0.86□□□□□ -2.55
SIX2Q9NPC8 MIR382-201ENST00000637119 76 ntBASIC-0.86□□□□□ -2.55
SIX2Q9NPC8 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.87□□□□□ -2.55
SIX2Q9NPC8 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
SIX2Q9NPC8 AP002795.1-201ENST00000534879 84 ntBASIC-0.87□□□□□ -2.55
SIX2Q9NPC8 MIR5683-201ENST00000636514 76 ntBASIC-0.87□□□□□ -2.55
SIX2Q9NPC8 MIR548Q-201ENST00000408404 100 ntBASIC-0.88□□□□□ -2.55
SIX2Q9NPC8 SNORD60.1-201ENST00000362451 73 ntBASIC-0.89□□□□□ -2.55
SIX2Q9NPC8 uc_338.19-201ENST00000616808 99 ntBASIC-0.89□□□□□ -2.55
SIX2Q9NPC8 snoU83B.1-201ENST00000517136 88 ntBASIC-0.9□□□□□ -2.55
SIX2Q9NPC8 MIR4511-201ENST00000582784 87 ntBASIC-0.9□□□□□ -2.55
SIX2Q9NPC8 AC103706.3-201ENST00000636297 85 ntBASIC-0.9□□□□□ -2.55
SIX2Q9NPC8 SNORA25.5-201ENST00000363782 126 ntBASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 MIR548AA1-201ENST00000384971 97 ntBASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 RNA5SP266-201ENST00000410273 108 ntBASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 RNU6-638P-201ENST00000516582 104 ntBASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 MIR4490-201ENST00000582647 84 ntBASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.91□□□□□ -2.56
SIX2Q9NPC8 RNA5SP331-201ENST00000364986 107 ntBASIC-0.92□□□□□ -2.56
SIX2Q9NPC8 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.92□□□□□ -2.56
SIX2Q9NPC8 RNU6-800P-201ENST00000384473 103 ntBASIC-0.92□□□□□ -2.56
SIX2Q9NPC8 MIR4499-201ENST00000584834 69 ntBASIC-0.92□□□□□ -2.56
SIX2Q9NPC8 MIR507-201ENST00000385234 94 ntBASIC-0.93□□□□□ -2.56
SIX2Q9NPC8 RNA5SP192-201ENST00000364404 120 ntBASIC-0.94□□□□□ -2.56
SIX2Q9NPC8 RNU6-172P-201ENST00000411000 93 ntBASIC-0.94□□□□□ -2.56
SIX2Q9NPC8 RNU6-122P-201ENST00000516818 107 ntBASIC-0.94□□□□□ -2.56
SIX2Q9NPC8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.94□□□□□ -2.56
SIX2Q9NPC8 MIR587-201ENST00000384845 96 ntBASIC-0.95□□□□□ -2.56
SIX2Q9NPC8 MIR29B1-201ENST00000385015 81 ntBASIC-0.95□□□□□ -2.56
SIX2Q9NPC8 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.95□□□□□ -2.56
SIX2Q9NPC8 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.95□□□□□ -2.56
SIX2Q9NPC8 AC114801.3-201ENST00000510231 177 ntBASIC-0.96□□□□□ -2.56
SIX2Q9NPC8 RNA5SP26-201ENST00000362406 119 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 RNU6-995P-201ENST00000391244 107 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 RNU7-151P-201ENST00000516930 53 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 MIR6818-201ENST00000621576 65 ntBASIC-0.98□□□□□ -2.57
SIX2Q9NPC8 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 274.6 ms