Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-755P-201ENST00000364400 103 ntBASIC-4.55□□□□□ -3.14
SCAPERQ9BY12 RNU6-624P-201ENST00000363411 107 ntBASIC-4.57□□□□□ -3.14
SCAPERQ9BY12 SNORD45.2-201ENST00000363552 72 ntBASIC-4.57□□□□□ -3.14
SCAPERQ9BY12 RNU6-854P-201ENST00000364036 107 ntBASIC-4.58□□□□□ -3.14
SCAPERQ9BY12 RNU6-1124P-201ENST00000384169 107 ntBASIC-4.58□□□□□ -3.14
SCAPERQ9BY12 SNORD58.1-201ENST00000391313 66 ntBASIC-4.58□□□□□ -3.14
SCAPERQ9BY12 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.58□□□□□ -3.14
SCAPERQ9BY12 RNU6-1020P-201ENST00000363684 107 ntBASIC-4.59□□□□□ -3.14
SCAPERQ9BY12 RNU6-1135P-201ENST00000411083 103 ntBASIC-4.6□□□□□ -3.15
SCAPERQ9BY12 SNORA81.3-201ENST00000517283 198 ntBASIC-4.6□□□□□ -3.15
SCAPERQ9BY12 SNORD113.1-201ENST00000363280 73 ntBASIC-4.61□□□□□ -3.15
SCAPERQ9BY12 SNORD42.2-201ENST00000365570 69 ntBASIC-4.61□□□□□ -3.15
SCAPERQ9BY12 AC074348.1-201ENST00000426503 132 ntBASIC-4.61□□□□□ -3.15
SCAPERQ9BY12 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.62□□□□□ -3.15
SCAPERQ9BY12 RNU6-789P-201ENST00000517105 102 ntBASIC-4.62□□□□□ -3.15
SCAPERQ9BY12 MIR7110-201ENST00000612638 86 ntBASIC-4.62□□□□□ -3.15
SCAPERQ9BY12 MIR8053-201ENST00000613344 75 ntBASIC-4.62□□□□□ -3.15
SCAPERQ9BY12 RNU6-822P-201ENST00000362707 106 ntBASIC-4.63□□□□□ -3.15
SCAPERQ9BY12 RNU6-810P-201ENST00000364001 107 ntBASIC-4.63□□□□□ -3.15
SCAPERQ9BY12 MIR8062-201ENST00000621515 85 ntBASIC-4.63□□□□□ -3.15
SCAPERQ9BY12 SNORA33.2-201ENST00000365413 134 ntBASIC-4.63□□□□□ -3.15
SCAPERQ9BY12 RNY3P1-201ENST00000365085 102 ntBASIC-4.64□□□□□ -3.15
SCAPERQ9BY12 RNU6-574P-201ENST00000384265 107 ntBASIC-4.64□□□□□ -3.15
SCAPERQ9BY12 SNORA63-201ENST00000363450 132 ntBASIC-4.65□□□□□ -3.15
SCAPERQ9BY12 Y_RNA.318-201ENST00000365131 97 ntBASIC-4.65□□□□□ -3.15
SCAPERQ9BY12 MIR4680-201ENST00000580906 66 ntBASIC-4.66□□□□□ -3.16
SCAPERQ9BY12 AC062037.1-201ENST00000605302 128 ntBASIC-4.66□□□□□ -3.16
SCAPERQ9BY12 MIR548AH-201ENST00000637109 76 ntBASIC-4.67□□□□□ -3.16
SCAPERQ9BY12 Y_RNA.43-201ENST00000362670 111 ntBASIC-4.68□□□□□ -3.16
SCAPERQ9BY12 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.68□□□□□ -3.16
SCAPERQ9BY12 RNU6-904P-201ENST00000516206 101 ntBASIC-4.68□□□□□ -3.16
SCAPERQ9BY12 RNU6-557P-201ENST00000516842 110 ntBASIC-4.68□□□□□ -3.16
SCAPERQ9BY12 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.69□□□□□ -3.16
SCAPERQ9BY12 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.69□□□□□ -3.16
SCAPERQ9BY12 RNU7-61P-201ENST00000515897 61 ntBASIC-4.69□□□□□ -3.16
SCAPERQ9BY12 MIR656-201ENST00000385224 78 ntBASIC-4.7□□□□□ -3.16
SCAPERQ9BY12 RNU6-402P-201ENST00000410678 103 ntBASIC-4.7□□□□□ -3.16
SCAPERQ9BY12 AL157777.2-201ENST00000258070 137 ntBASIC-4.71□□□□□ -3.16
SCAPERQ9BY12 RNU4-71P-201ENST00000516258 113 ntBASIC-4.71□□□□□ -3.16
SCAPERQ9BY12 AC022559.1-201ENST00000520905 205 ntBASIC-4.71□□□□□ -3.16
SCAPERQ9BY12 AC020661.2-201ENST00000560114 134 ntBASIC-4.71□□□□□ -3.16
SCAPERQ9BY12 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.72□□□□□ -3.16
SCAPERQ9BY12 RNY4P13-201ENST00000384284 96 ntBASIC-4.72□□□□□ -3.17
SCAPERQ9BY12 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.72□□□□□ -3.17
SCAPERQ9BY12 AC141273.2-201ENST00000618989 130 ntBASIC-4.72□□□□□ -3.17
SCAPERQ9BY12 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.73□□□□□ -3.17
SCAPERQ9BY12 SNORD116.2-201ENST00000391251 93 ntBASIC-4.73□□□□□ -3.17
SCAPERQ9BY12 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4.73□□□□□ -3.17
SCAPERQ9BY12 AC139453.2-201ENST00000487255 133 ntBASIC-4.73□□□□□ -3.17
SCAPERQ9BY12 AC093729.1-201ENST00000513074 128 ntBASIC-4.73□□□□□ -3.17
SCAPERQ9BY12 RNU6-686P-201ENST00000364839 107 ntBASIC-4.74□□□□□ -3.17
SCAPERQ9BY12 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.74□□□□□ -3.17
SCAPERQ9BY12 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.75□□□□□ -3.17
SCAPERQ9BY12 RNU4-40P-201ENST00000364351 143 ntBASIC-4.75□□□□□ -3.17
SCAPERQ9BY12 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.75□□□□□ -3.17
SCAPERQ9BY12 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.75□□□□□ -3.17
SCAPERQ9BY12 SNORD45A-201ENST00000384512 84 ntBASIC-4.76□□□□□ -3.17
SCAPERQ9BY12 RNU6-985P-201ENST00000410182 104 ntBASIC-4.76□□□□□ -3.17
SCAPERQ9BY12 AP001318.4-201ENST00000616637 121 ntBASIC-4.76□□□□□ -3.17
SCAPERQ9BY12 MIR1297-201ENST00000637311 77 ntBASIC-4.76□□□□□ -3.17
SCAPERQ9BY12 RNU6-633P-201ENST00000362612 103 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 SNORA63.4-201ENST00000362763 126 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 RNU6-474P-201ENST00000384243 107 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 RNU6-772P-201ENST00000516042 105 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 RNU6-162P-201ENST00000516228 103 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 MIR548X2-201ENST00000579776 100 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 AC072026.1-201ENST00000605023 201 ntBASIC-4.77□□□□□ -3.17
SCAPERQ9BY12 Y_RNA.17-201ENST00000362433 111 ntBASIC-4.78□□□□□ -3.17
SCAPERQ9BY12 RNU6-742P-201ENST00000365289 107 ntBASIC-4.78□□□□□ -3.17
SCAPERQ9BY12 MTATP8P2-201ENST00000435212 202 ntBASIC-4.78□□□□□ -3.17
SCAPERQ9BY12 AL451105.1-201ENST00000450005 189 ntBASIC-4.78□□□□□ -3.17
SCAPERQ9BY12 U7.3-201ENST00000616123 62 ntBASIC-4.78□□□□□ -3.17
SCAPERQ9BY12 RNU6-231P-201ENST00000517122 103 ntBASIC-4.79□□□□□ -3.18
SCAPERQ9BY12 RNU6-92P-201ENST00000605893 104 ntBASIC-4.79□□□□□ -3.18
SCAPERQ9BY12 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.8□□□□□ -3.18
SCAPERQ9BY12 SNORA40B-201ENST00000385573 128 ntBASIC-4.81□□□□□ -3.18
SCAPERQ9BY12 RNU6-659P-201ENST00000516454 104 ntBASIC-4.81□□□□□ -3.18
SCAPERQ9BY12 RNU6-635P-201ENST00000516651 102 ntBASIC-4.81□□□□□ -3.18
SCAPERQ9BY12 MIR4484-201ENST00000582855 83 ntBASIC-4.81□□□□□ -3.18
SCAPERQ9BY12 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.82□□□□□ -3.18
SCAPERQ9BY12 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.83□□□□□ -3.18
SCAPERQ9BY12 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.83□□□□□ -3.18
SCAPERQ9BY12 Y_RNA.356-201ENST00000365475 113 ntBASIC-4.84□□□□□ -3.18
SCAPERQ9BY12 SNORD45C-201ENST00000383893 79 ntBASIC-4.84□□□□□ -3.18
SCAPERQ9BY12 Y_RNA.709-201ENST00000516952 92 ntBASIC-4.84□□□□□ -3.18
SCAPERQ9BY12 RNA5SP224-201ENST00000365069 126 ntBASIC-4.85□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.85□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.86□□□□□ -3.19
SCAPERQ9BY12 MIR4760-201ENST00000585040 80 ntBASIC-4.86□□□□□ -3.19
SCAPERQ9BY12 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.87□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.206-201ENST00000364136 102 ntBASIC-4.88□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.88□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.89□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.580-201ENST00000391004 95 ntBASIC-4.89□□□□□ -3.19
SCAPERQ9BY12 SNORD60.1-201ENST00000362451 73 ntBASIC-4.9□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.9□□□□□ -3.19
SCAPERQ9BY12 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.9□□□□□ -3.19
SCAPERQ9BY12 RNU6-542P-201ENST00000516405 103 ntBASIC-4.9□□□□□ -3.19
SCAPERQ9BY12 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.91□□□□□ -3.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms