Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MIR6888-201ENST00000621977 67 ntBASIC-0.58□□□□□ -2.5
SMC1BQ8NDV3 RNU6-649P-201ENST00000384463 107 ntBASIC-0.59□□□□□ -2.5
SMC1BQ8NDV3 MIR630-201ENST00000384957 97 ntBASIC-0.59□□□□□ -2.5
SMC1BQ8NDV3 MIR124-2-201ENST00000385081 109 ntBASIC-0.59□□□□□ -2.5
SMC1BQ8NDV3 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 RNU6-924P-201ENST00000362926 108 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 AC021146.6-201ENST00000514659 117 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 RNU6-542P-201ENST00000516405 103 ntBASIC-0.6□□□□□ -2.51
SMC1BQ8NDV3 MIR429-201ENST00000362106 83 ntBASIC-0.61□□□□□ -2.51
SMC1BQ8NDV3 MIR527-201ENST00000385244 85 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 RNU6-630P-201ENST00000391258 106 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 U4.4-201ENST00000620626 117 ntBASIC-0.62□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 SNORD18.2-201ENST00000459604 70 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 RNU6-539P-201ENST00000516665 103 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.63□□□□□ -2.51
SMC1BQ8NDV3 MIR587-201ENST00000384845 96 ntBASIC-0.64□□□□□ -2.51
SMC1BQ8NDV3 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.64□□□□□ -2.51
SMC1BQ8NDV3 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.64□□□□□ -2.51
SMC1BQ8NDV3 MIR3681-201ENST00000580089 72 ntBASIC-0.64□□□□□ -2.51
SMC1BQ8NDV3 SNORA25.4-201ENST00000363666 124 ntBASIC-0.65□□□□□ -2.51
SMC1BQ8NDV3 MIR4320-201ENST00000636981 65 ntBASIC-0.66□□□□□ -2.52
SMC1BQ8NDV3 U6.111-201ENST00000636093 83 ntBASIC-0.67□□□□□ -2.52
SMC1BQ8NDV3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.68□□□□□ -2.52
SMC1BQ8NDV3 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.69□□□□□ -2.52
SMC1BQ8NDV3 MIR548AG1-201ENST00000579932 66 ntBASIC-0.69□□□□□ -2.52
SMC1BQ8NDV3 MIR4436A-201ENST00000585278 85 ntBASIC-0.69□□□□□ -2.52
SMC1BQ8NDV3 SNORD114-14-201ENST00000362723 75 ntBASIC-0.7□□□□□ -2.52
SMC1BQ8NDV3 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.7□□□□□ -2.52
SMC1BQ8NDV3 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
SMC1BQ8NDV3 RNU6-458P-201ENST00000384179 107 ntBASIC-0.71□□□□□ -2.52
SMC1BQ8NDV3 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.71□□□□□ -2.52
SMC1BQ8NDV3 AP000533.3-201ENST00000447704 118 ntBASIC-0.71□□□□□ -2.52
SMC1BQ8NDV3 U6.58-201ENST00000613107 107 ntBASIC-0.71□□□□□ -2.52
SMC1BQ8NDV3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.72□□□□□ -2.52
SMC1BQ8NDV3 SNORD114-3-201ENST00000364969 75 ntBASIC-0.74□□□□□ -2.53
SMC1BQ8NDV3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.74□□□□□ -2.53
SMC1BQ8NDV3 AC005520.4-201ENST00000604337 90 ntBASIC-0.74□□□□□ -2.53
SMC1BQ8NDV3 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.75□□□□□ -2.53
SMC1BQ8NDV3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.75□□□□□ -2.53
SMC1BQ8NDV3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.75□□□□□ -2.53
SMC1BQ8NDV3 RNU6-92P-201ENST00000605893 104 ntBASIC-0.75□□□□□ -2.53
SMC1BQ8NDV3 RNU6-246P-201ENST00000384702 107 ntBASIC-0.76□□□□□ -2.53
SMC1BQ8NDV3 RNU6-800P-201ENST00000384473 103 ntBASIC-0.77□□□□□ -2.53
SMC1BQ8NDV3 SNORD116-16-201ENST00000384533 92 ntBASIC-0.77□□□□□ -2.53
SMC1BQ8NDV3 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.78□□□□□ -2.53
SMC1BQ8NDV3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.78□□□□□ -2.53
SMC1BQ8NDV3 AC114801.3-201ENST00000510231 177 ntBASIC-0.78□□□□□ -2.53
SMC1BQ8NDV3 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.79□□□□□ -2.54
SMC1BQ8NDV3 RNU7-88P-201ENST00000458752 63 ntBASIC-0.79□□□□□ -2.54
SMC1BQ8NDV3 U7.5-201ENST00000517224 61 ntBASIC-0.79□□□□□ -2.54
SMC1BQ8NDV3 AC103706.3-201ENST00000636297 85 ntBASIC-0.79□□□□□ -2.54
SMC1BQ8NDV3 MIR4511-201ENST00000582784 87 ntBASIC-0.81□□□□□ -2.54
SMC1BQ8NDV3 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.82□□□□□ -2.54
SMC1BQ8NDV3 SNORD114-17-201ENST00000364699 75 ntBASIC-0.83□□□□□ -2.54
SMC1BQ8NDV3 SNORA41B-201ENST00000384785 128 ntBASIC-0.83□□□□□ -2.54
SMC1BQ8NDV3 MIR196A1-201ENST00000388006 70 ntBASIC-0.83□□□□□ -2.54
SMC1BQ8NDV3 RNU6-696P-201ENST00000390834 107 ntBASIC-0.83□□□□□ -2.54
SMC1BQ8NDV3 RNU6-732P-201ENST00000516033 103 ntBASIC-0.84□□□□□ -2.54
SMC1BQ8NDV3 MIR378F-201ENST00000578143 78 ntBASIC-0.84□□□□□ -2.54
SMC1BQ8NDV3 SNORA26.4-201ENST00000391188 123 ntBASIC-0.85□□□□□ -2.55
SMC1BQ8NDV3 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.85□□□□□ -2.55
SMC1BQ8NDV3 SNORA25.5-201ENST00000363782 126 ntBASIC-0.86□□□□□ -2.55
SMC1BQ8NDV3 RNU6-10P-201ENST00000384036 107 ntBASIC-0.86□□□□□ -2.55
SMC1BQ8NDV3 SNORD115-33-201ENST00000363723 82 ntBASIC-0.88□□□□□ -2.55
SMC1BQ8NDV3 SNORD60.1-201ENST00000362451 73 ntBASIC-0.9□□□□□ -2.55
SMC1BQ8NDV3 SNORD63.1-201ENST00000516178 80 ntBASIC-0.9□□□□□ -2.55
SMC1BQ8NDV3 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.9□□□□□ -2.55
SMC1BQ8NDV3 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
SMC1BQ8NDV3 RNU6-598P-201ENST00000364017 105 ntBASIC-0.91□□□□□ -2.56
SMC1BQ8NDV3 AL353691.2-201ENST00000443795 59 ntBASIC-0.91□□□□□ -2.56
SMC1BQ8NDV3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.91□□□□□ -2.56
SMC1BQ8NDV3 SNORD83B-201ENST00000386745 93 ntBASIC-0.92□□□□□ -2.56
SMC1BQ8NDV3 RNA5SP192-201ENST00000364404 120 ntBASIC-0.94□□□□□ -2.56
SMC1BQ8NDV3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
SMC1BQ8NDV3 RNU6-122P-201ENST00000516818 107 ntBASIC-0.94□□□□□ -2.56
SMC1BQ8NDV3 SNORD1B-201ENST00000363091 84 ntBASIC-0.95□□□□□ -2.56
SMC1BQ8NDV3 RNU6-940P-201ENST00000363433 104 ntBASIC-0.95□□□□□ -2.56
SMC1BQ8NDV3 MIR548Q-201ENST00000408404 100 ntBASIC-0.95□□□□□ -2.56
SMC1BQ8NDV3 RNU6-471P-201ENST00000383944 106 ntBASIC-0.96□□□□□ -2.56
SMC1BQ8NDV3 MIR365A-201ENST00000362260 87 ntBASIC-0.97□□□□□ -2.56
SMC1BQ8NDV3 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.97□□□□□ -2.56
SMC1BQ8NDV3 MIR548AA1-201ENST00000384971 97 ntBASIC-0.97□□□□□ -2.56
SMC1BQ8NDV3 U2.18-201ENST00000622185 84 ntBASIC-0.97□□□□□ -2.56
SMC1BQ8NDV3 SNORD114-25-201ENST00000363742 72 ntBASIC-0.99□□□□□ -2.57
SMC1BQ8NDV3 AL500527.2-201ENST00000454105 95 ntBASIC-0.99□□□□□ -2.57
SMC1BQ8NDV3 RNU6-590P-201ENST00000365039 107 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms