Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
BEST3Q8N1M1 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.9□□□□□ -2.55
BEST3Q8N1M1 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.91□□□□□ -2.56
BEST3Q8N1M1 RNU6-687P-201ENST00000516443 89 ntBASIC-0.91□□□□□ -2.56
BEST3Q8N1M1 snoU83B.1-201ENST00000517136 88 ntBASIC-0.91□□□□□ -2.56
BEST3Q8N1M1 MIR548V-201ENST00000584165 80 ntBASIC-0.91□□□□□ -2.56
BEST3Q8N1M1 MIR429-201ENST00000362106 83 ntBASIC-0.92□□□□□ -2.56
BEST3Q8N1M1 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.92□□□□□ -2.56
BEST3Q8N1M1 MIR4306-201ENST00000583390 91 ntBASIC-0.92□□□□□ -2.56
BEST3Q8N1M1 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 RNU6-24P-201ENST00000384440 107 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 RNU6-246P-201ENST00000384702 107 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 MIR527-201ENST00000385244 85 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 SNORD113-2-201ENST00000391082 72 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 SNORA26.4-201ENST00000391188 123 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 SNORD63.1-201ENST00000516178 80 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 RNY1P9-201ENST00000532431 109 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 U4.4-201ENST00000620626 117 ntBASIC-0.93□□□□□ -2.56
BEST3Q8N1M1 RNU6-228P-201ENST00000362700 106 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 SNORD115-33-201ENST00000363723 82 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 MIR889-201ENST00000401280 79 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 MIR1255A-201ENST00000408338 113 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 SNORD57-201ENST00000448188 72 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 MIR3115-201ENST00000577915 68 ntBASIC-0.94□□□□□ -2.56
BEST3Q8N1M1 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.95□□□□□ -2.56
BEST3Q8N1M1 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.95□□□□□ -2.56
BEST3Q8N1M1 SNORD115-31-201ENST00000365318 82 ntBASIC-0.95□□□□□ -2.56
BEST3Q8N1M1 MIR630-201ENST00000384957 97 ntBASIC-0.95□□□□□ -2.56
BEST3Q8N1M1 RNU6-279P-201ENST00000391297 101 ntBASIC-0.95□□□□□ -2.56
BEST3Q8N1M1 RNA5SP26-201ENST00000362406 119 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 RNU6-458P-201ENST00000384179 107 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 SNORD116-24-201ENST00000384549 92 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 RNU6-857P-201ENST00000515893 110 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 U7.5-201ENST00000517224 61 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 AP002795.1-201ENST00000534879 84 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 U6.58-201ENST00000613107 107 ntBASIC-0.96□□□□□ -2.56
BEST3Q8N1M1 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 RNU6-10P-201ENST00000384036 107 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 SNORD78.1-201ENST00000390866 65 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 MIR6818-201ENST00000621576 65 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 MIR4679-1-201ENST00000637619 75 ntBASIC-0.97□□□□□ -2.56
BEST3Q8N1M1 RNU7-88P-201ENST00000458752 63 ntBASIC-0.98□□□□□ -2.57
BEST3Q8N1M1 RNU6-732P-201ENST00000516033 103 ntBASIC-0.98□□□□□ -2.57
BEST3Q8N1M1 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.98□□□□□ -2.57
BEST3Q8N1M1 MIR6874-201ENST00000635894 71 ntBASIC-0.99□□□□□ -2.57
BEST3Q8N1M1 RNA5SP192-201ENST00000364404 120 ntBASIC-1□□□□□ -2.57
BEST3Q8N1M1 RNU6-634P-201ENST00000459134 106 ntBASIC-1□□□□□ -2.57
BEST3Q8N1M1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1□□□□□ -2.57
BEST3Q8N1M1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.01□□□□□ -2.57
BEST3Q8N1M1 MIR29B1-201ENST00000385015 81 ntBASIC-1.01□□□□□ -2.57
BEST3Q8N1M1 AL353691.2-201ENST00000443795 59 ntBASIC-1.01□□□□□ -2.57
BEST3Q8N1M1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.01□□□□□ -2.57
BEST3Q8N1M1 AC091912.2-201ENST00000624798 167 ntBASIC-1.01□□□□□ -2.57
BEST3Q8N1M1 MIR409-201ENST00000362237 79 ntBASIC-1.02□□□□□ -2.57
BEST3Q8N1M1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.02□□□□□ -2.57
BEST3Q8N1M1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.02□□□□□ -2.57
BEST3Q8N1M1 MIR587-201ENST00000384845 96 ntBASIC-1.02□□□□□ -2.57
BEST3Q8N1M1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.03□□□□□ -2.57
BEST3Q8N1M1 RNU6-542P-201ENST00000516405 103 ntBASIC-1.03□□□□□ -2.57
BEST3Q8N1M1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.03□□□□□ -2.57
BEST3Q8N1M1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.03□□□□□ -2.57
BEST3Q8N1M1 SNORD19-201ENST00000391191 68 ntBASIC-1.04□□□□□ -2.58
BEST3Q8N1M1 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.05□□□□□ -2.58
BEST3Q8N1M1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
BEST3Q8N1M1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.05□□□□□ -2.58
BEST3Q8N1M1 RNU6-871P-201ENST00000516122 100 ntBASIC-1.05□□□□□ -2.58
BEST3Q8N1M1 MIR6502-201ENST00000617296 76 ntBASIC-1.05□□□□□ -2.58
BEST3Q8N1M1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.06□□□□□ -2.58
BEST3Q8N1M1 HLA-S-202ENST00000425174 53 ntBASIC-1.06□□□□□ -2.58
BEST3Q8N1M1 MIR5591-201ENST00000578248 65 ntBASIC-1.06□□□□□ -2.58
BEST3Q8N1M1 MIR507-201ENST00000385234 94 ntBASIC-1.07□□□□□ -2.58
BEST3Q8N1M1 RNU6-663P-201ENST00000391105 106 ntBASIC-1.07□□□□□ -2.58
BEST3Q8N1M1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.07□□□□□ -2.58
BEST3Q8N1M1 MIR3165-201ENST00000579874 75 ntBASIC-1.07□□□□□ -2.58
BEST3Q8N1M1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.08□□□□□ -2.58
BEST3Q8N1M1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
BEST3Q8N1M1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.08□□□□□ -2.58
BEST3Q8N1M1 RNA5SP225-201ENST00000410874 135 ntBASIC-1.09□□□□□ -2.58
BEST3Q8N1M1 RNU6-523P-201ENST00000516304 54 ntBASIC-1.09□□□□□ -2.58
BEST3Q8N1M1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.09□□□□□ -2.58
BEST3Q8N1M1 AC138207.3-201ENST00000585289 166 ntBASIC-1.09□□□□□ -2.58
BEST3Q8N1M1 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.1□□□□□ -2.59
BEST3Q8N1M1 MIR5683-201ENST00000636514 76 ntBASIC-1.1□□□□□ -2.59
BEST3Q8N1M1 RNU6-598P-201ENST00000364017 105 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 SNORA41B-201ENST00000384785 128 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 MIR548Q-201ENST00000408404 100 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 AC090616.4-201ENST00000448026 115 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 MIR4490-201ENST00000582647 84 ntBASIC-1.11□□□□□ -2.59
BEST3Q8N1M1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.12□□□□□ -2.59
BEST3Q8N1M1 Y_RNA.685-201ENST00000516532 108 ntBASIC-1.12□□□□□ -2.59
BEST3Q8N1M1 AL627230.5-201ENST00000619807 58 ntBASIC-1.12□□□□□ -2.59
BEST3Q8N1M1 SNORD30.1-201ENST00000391309 70 ntBASIC-1.13□□□□□ -2.59
BEST3Q8N1M1 RNU6-92P-201ENST00000605893 104 ntBASIC-1.13□□□□□ -2.59
BEST3Q8N1M1 MIR4662A-201ENST00000637499 67 ntBASIC-1.13□□□□□ -2.59
BEST3Q8N1M1 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.14□□□□□ -2.59
BEST3Q8N1M1 MIR487B-201ENST00000385021 84 ntBASIC-1.14□□□□□ -2.59
BEST3Q8N1M1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.14□□□□□ -2.59
BEST3Q8N1M1 MIR4320-201ENST00000636981 65 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 291.4 ms