Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-380P-201ENST00000410207 107 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 RNU6-627P-201ENST00000364032 102 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 RNY3P15-201ENST00000516297 97 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 MIR548X-201ENST00000580069 75 ntBASIC-2.55□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RN7SKP298-201ENST00000515950 94 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-232P-201ENST00000517144 64 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-659P-201ENST00000516454 104 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 SNORD58B-201ENST00000607313 66 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 AC139792.2-201ENST00000624218 587 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 SNORD113-6-201ENST00000363345 75 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 MIR4801-201ENST00000582704 82 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 SNORD116-24-201ENST00000384549 92 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AL160413.1-201ENST00000622780 310 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AP001340.1-201ENST00000624405 217 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.58□□□□□ -2.82
VPS13DQ5THJ4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.58□□□□□ -2.82
VPS13DQ5THJ4 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU7-30P-201ENST00000516835 62 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-121P-201ENST00000410525 99 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 MIR5690-201ENST00000583739 73 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 AC113139.1-201ENST00000605049 239 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-915P-201ENST00000364943 103 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-483P-201ENST00000384088 108 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-895P-201ENST00000384125 103 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 DEFB108C-201ENST00000400154 252 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 SNORD58C-201ENST00000365223 64 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-11-201ENST00000408051 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-9-201ENST00000408365 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-10-201ENST00000408734 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-2-201ENST00000607096 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 U7.3-201ENST00000616123 62 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 SNORD127-201ENST00000458892 86 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 RNU6-379P-201ENST00000363813 104 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 MIR4282-201ENST00000583613 67 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNU7-125P-201ENST00000458760 62 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNY3P16-201ENST00000516338 101 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNU6-275P-201ENST00000364910 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MIR548H4-201ENST00000408689 111 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 RNU6-122P-201ENST00000516818 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 RNU6-988P-201ENST00000519081 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MTND4LP32-201ENST00000636111 270 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 U7.2-201ENST00000607576 63 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MIR664A-201ENST00000626086 82 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 AL157777.2-201ENST00000258070 137 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 RNU6-633P-201ENST00000362612 103 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 RNU6-574P-201ENST00000384265 107 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 MIR8062-201ENST00000621515 85 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 RNU6-411P-201ENST00000384451 107 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 AC090425.1-201ENST00000610007 140 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 RNU6-823P-201ENST00000391042 103 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 AC072026.1-201ENST00000605023 201 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 SNORD116-29-201ENST00000384516 83 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.66□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.66□□□□□ -2.83
VPS13DQ5THJ4 AL158147.1-201ENST00000443970 75 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 SNORD116-22-201ENST00000384430 92 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 RNU6-808P-201ENST00000391233 108 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 AC006160.2-201ENST00000637708 154 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 RNU4-33P-201ENST00000364316 85 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 RNU6-780P-201ENST00000391030 104 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 MIR1252-201ENST00000408861 65 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 AC109635.3-201ENST00000529536 185 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 RNU6-259P-201ENST00000383999 107 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MTND5P22-201ENST00000458380 195 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR3938-201ENST00000582157 103 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR4484-201ENST00000582855 83 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR3611-201ENST00000584484 83 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU6-315P-201ENST00000362666 107 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 SNORA19-201ENST00000384737 128 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU6-314P-201ENST00000516574 104 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU7-152P-201ENST00000458982 64 ntBASIC-2.7□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.7□□□□□ -2.84
VPS13DQ5THJ4 MIR494-201ENST00000349529 81 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 SNORD113-1-201ENST00000365321 69 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 AC009094.1-201ENST00000564443 426 ntBASIC-2.71□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 246.8 ms