Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR656-201ENST00000385224 78 ntBASIC-4.8□□□□□ -3.18
CCDC58Q4VC31 SNORD58C-201ENST00000365223 64 ntBASIC-4.81□□□□□ -3.18
CCDC58Q4VC31 SNORD45A-201ENST00000384512 84 ntBASIC-4.81□□□□□ -3.18
CCDC58Q4VC31 RNU6-876P-201ENST00000391295 104 ntBASIC-4.81□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.96-201ENST00000363092 109 ntBASIC-4.82□□□□□ -3.18
CCDC58Q4VC31 MIR548AH-201ENST00000637109 76 ntBASIC-4.82□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.83□□□□□ -3.18
CCDC58Q4VC31 AC139453.2-201ENST00000487255 133 ntBASIC-4.83□□□□□ -3.18
CCDC58Q4VC31 AC062037.1-201ENST00000605302 128 ntBASIC-4.83□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.70-201ENST00000362886 110 ntBASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 Y_RNA.382-201ENST00000365672 114 ntBASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 RNU6-574P-201ENST00000384265 107 ntBASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 SCARNA23-201ENST00000516060 130 ntBASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 RNU6-557P-201ENST00000516842 110 ntBASIC-4.84□□□□□ -3.18
CCDC58Q4VC31 RNU6-92P-201ENST00000605893 104 ntBASIC-4.86□□□□□ -3.19
CCDC58Q4VC31 AP001318.4-201ENST00000616637 121 ntBASIC-4.86□□□□□ -3.19
CCDC58Q4VC31 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.87□□□□□ -3.19
CCDC58Q4VC31 Y_RNA.277-201ENST00000364754 102 ntBASIC-4.87□□□□□ -3.19
CCDC58Q4VC31 Y_RNA.516-201ENST00000384541 124 ntBASIC-4.87□□□□□ -3.19
CCDC58Q4VC31 RNU6-918P-201ENST00000391219 106 ntBASIC-4.87□□□□□ -3.19
CCDC58Q4VC31 AC113195.1-201ENST00000579952 141 ntBASIC-4.87□□□□□ -3.19
CCDC58Q4VC31 SNORA63.4-201ENST00000362763 126 ntBASIC-4.88□□□□□ -3.19
CCDC58Q4VC31 RNU6-1340P-201ENST00000384438 107 ntBASIC-4.88□□□□□ -3.19
CCDC58Q4VC31 RNU6-686P-201ENST00000364839 107 ntBASIC-4.89□□□□□ -3.19
CCDC58Q4VC31 SNORD116-4-201ENST00000384733 96 ntBASIC-4.89□□□□□ -3.19
CCDC58Q4VC31 MT-TL1-201ENST00000386347 75 ntBASIC-4.89□□□□□ -3.19
CCDC58Q4VC31 RNU6-1061P-201ENST00000516530 99 ntBASIC-4.89□□□□□ -3.19
CCDC58Q4VC31 SNORA40.16-201ENST00000517238 121 ntBASIC-4.89□□□□□ -3.19
CCDC58Q4VC31 SNORD60.1-201ENST00000362451 73 ntBASIC-4.9□□□□□ -3.19
CCDC58Q4VC31 Y_RNA.626-201ENST00000411288 95 ntBASIC-4.9□□□□□ -3.19
CCDC58Q4VC31 RNA5SP224-201ENST00000365069 126 ntBASIC-4.91□□□□□ -3.2
CCDC58Q4VC31 MTND2P23-201ENST00000422990 651 ntBASIC-4.91□□□□□ -3.2
CCDC58Q4VC31 RNU7-61P-201ENST00000515897 61 ntBASIC-4.91□□□□□ -3.2
CCDC58Q4VC31 MIR4484-201ENST00000582855 83 ntBASIC-4.91□□□□□ -3.2
CCDC58Q4VC31 Y_RNA.218-201ENST00000364218 104 ntBASIC-4.92□□□□□ -3.2
CCDC58Q4VC31 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.92□□□□□ -3.2
CCDC58Q4VC31 Y_RNA.579-201ENST00000390939 94 ntBASIC-4.92□□□□□ -3.2
CCDC58Q4VC31 AP001340.1-201ENST00000624405 217 ntBASIC-4.92□□□□□ -3.2
CCDC58Q4VC31 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.93□□□□□ -3.2
CCDC58Q4VC31 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.93□□□□□ -3.2
CCDC58Q4VC31 MIR548AI-201ENST00000579940 88 ntBASIC-4.93□□□□□ -3.2
CCDC58Q4VC31 SNORD45C-201ENST00000383893 79 ntBASIC-4.94□□□□□ -3.2
CCDC58Q4VC31 RNU6-904P-201ENST00000516206 101 ntBASIC-4.94□□□□□ -3.2
CCDC58Q4VC31 Y_RNA.260-201ENST00000364628 101 ntBASIC-4.95□□□□□ -3.2
CCDC58Q4VC31 SNORD116-24-201ENST00000384549 92 ntBASIC-4.95□□□□□ -3.2
CCDC58Q4VC31 RNU6-1219P-201ENST00000516143 112 ntBASIC-4.95□□□□□ -3.2
CCDC58Q4VC31 RNU6-162P-201ENST00000516228 103 ntBASIC-4.95□□□□□ -3.2
CCDC58Q4VC31 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.96□□□□□ -3.2
CCDC58Q4VC31 RNU6-196P-201ENST00000384315 107 ntBASIC-4.96□□□□□ -3.2
CCDC58Q4VC31 AC093729.1-201ENST00000513074 128 ntBASIC-4.96□□□□□ -3.2
CCDC58Q4VC31 RNU6-633P-201ENST00000362612 103 ntBASIC-4.97□□□□□ -3.21
CCDC58Q4VC31 MTATP8P2-201ENST00000435212 202 ntBASIC-4.98□□□□□ -3.21
CCDC58Q4VC31 MIR1297-201ENST00000637311 77 ntBASIC-4.98□□□□□ -3.21
CCDC58Q4VC31 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.99□□□□□ -3.21
CCDC58Q4VC31 SNORA81.3-201ENST00000517283 198 ntBASIC-4.99□□□□□ -3.21
CCDC58Q4VC31 Y_RNA.206-201ENST00000364136 102 ntBASIC-5□□□□□ -3.21
CCDC58Q4VC31 RNU6-659P-201ENST00000516454 104 ntBASIC-5□□□□□ -3.21
CCDC58Q4VC31 U7.3-201ENST00000616123 62 ntBASIC-5□□□□□ -3.21
CCDC58Q4VC31 MIR664A-201ENST00000626086 82 ntBASIC-5□□□□□ -3.21
CCDC58Q4VC31 RNU6-542P-201ENST00000516405 103 ntBASIC-5.01□□□□□ -3.21
CCDC58Q4VC31 RNU6-988P-201ENST00000519081 107 ntBASIC-5.01□□□□□ -3.21
CCDC58Q4VC31 Y_RNA.58-201ENST00000362807 102 ntBASIC-5.02□□□□□ -3.21
CCDC58Q4VC31 Y_RNA.202-201ENST00000364083 110 ntBASIC-5.02□□□□□ -3.21
CCDC58Q4VC31 U7.2-201ENST00000607576 63 ntBASIC-5.02□□□□□ -3.21
CCDC58Q4VC31 RNU6-1227P-201ENST00000383981 107 ntBASIC-5.03□□□□□ -3.21
CCDC58Q4VC31 RNU6-713P-201ENST00000384761 107 ntBASIC-5.03□□□□□ -3.21
CCDC58Q4VC31 AC139792.2-201ENST00000624218 587 ntBASIC-5.05□□□□□ -3.22
CCDC58Q4VC31 U6.104-201ENST00000637979 90 ntBASIC-5.05□□□□□ -3.22
CCDC58Q4VC31 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-5.06□□□□□ -3.22
CCDC58Q4VC31 Y_RNA.586-201ENST00000391146 98 ntBASIC-5.06□□□□□ -3.22
CCDC58Q4VC31 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.06□□□□□ -3.22
CCDC58Q4VC31 RNU6-419P-201ENST00000517030 63 ntBASIC-5.07□□□□□ -3.22
CCDC58Q4VC31 RNU6-836P-201ENST00000362920 107 ntBASIC-5.09□□□□□ -3.22
CCDC58Q4VC31 RNU6-788P-201ENST00000390967 104 ntBASIC-5.1□□□□□ -3.23
CCDC58Q4VC31 RNU6-772P-201ENST00000516042 105 ntBASIC-5.12□□□□□ -3.23
CCDC58Q4VC31 AL157777.2-201ENST00000258070 137 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 Y_RNA.335-201ENST00000365299 96 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 SNORD115.2-201ENST00000391126 59 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 RNU7-119P-201ENST00000459279 63 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 MIR4668-201ENST00000582284 70 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 AC141273.2-201ENST00000618989 130 ntBASIC-5.13□□□□□ -3.23
CCDC58Q4VC31 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-5.14□□□□□ -3.23
CCDC58Q4VC31 MIR4760-201ENST00000585040 80 ntBASIC-5.14□□□□□ -3.23
CCDC58Q4VC31 SNORD42.2-201ENST00000365570 69 ntBASIC-5.15□□□□□ -3.23
CCDC58Q4VC31 Y_RNA.318-201ENST00000365131 97 ntBASIC-5.16□□□□□ -3.24
CCDC58Q4VC31 Y_RNA.107-201ENST00000363190 121 ntBASIC-5.17□□□□□ -3.24
CCDC58Q4VC31 RNU6-895P-201ENST00000384125 103 ntBASIC-5.17□□□□□ -3.24
CCDC58Q4VC31 Y_RNA.478-201ENST00000384358 107 ntBASIC-5.17□□□□□ -3.24
CCDC58Q4VC31 RNU6-1241P-201ENST00000384536 107 ntBASIC-5.17□□□□□ -3.24
CCDC58Q4VC31 Y_RNA.544-201ENST00000384650 113 ntBASIC-5.17□□□□□ -3.24
CCDC58Q4VC31 RNY3P1-201ENST00000365085 102 ntBASIC-5.18□□□□□ -3.24
CCDC58Q4VC31 RNU6-1135P-201ENST00000411083 103 ntBASIC-5.18□□□□□ -3.24
CCDC58Q4VC31 AC022559.1-201ENST00000520905 205 ntBASIC-5.18□□□□□ -3.24
CCDC58Q4VC31 MIR590-201ENST00000385008 97 ntBASIC-5.19□□□□□ -3.24
CCDC58Q4VC31 Y_RNA.459-201ENST00000384251 102 ntBASIC-5.2□□□□□ -3.24
CCDC58Q4VC31 RNU6-497P-201ENST00000365316 104 ntBASIC-5.21□□□□□ -3.24
CCDC58Q4VC31 RNU6-422P-201ENST00000384632 107 ntBASIC-5.21□□□□□ -3.24
CCDC58Q4VC31 SNORD58.1-201ENST00000391313 66 ntBASIC-5.21□□□□□ -3.24
CCDC58Q4VC31 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.21□□□□□ -3.24
Retrieved 100 of 98,524 protein–RNA pairs in 236.7 ms