Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SNORD116-16-201ENST00000384533 92 ntBASIC0.01□□□□□ -2.41
MRE11P49959 SNORD56B-201ENST00000384713 71 ntBASIC0.01□□□□□ -2.41
MRE11P49959 MIR466-201ENST00000580653 84 ntBASIC0.01□□□□□ -2.41
MRE11P49959 MIR4464-201ENST00000580818 92 ntBASIC0.01□□□□□ -2.41
MRE11P49959 RNU6-901P-201ENST00000384593 106 ntBASIC0□□□□□ -2.41
MRE11P49959 Y_RNA.698-201ENST00000516798 118 ntBASIC0□□□□□ -2.41
MRE11P49959 MIR5704-201ENST00000584029 77 ntBASIC0□□□□□ -2.41
MRE11P49959 MIR6888-201ENST00000621977 67 ntBASIC-0.01□□□□□ -2.41
MRE11P49959 RNU6-458P-201ENST00000384179 107 ntBASIC-0.03□□□□□ -2.41
MRE11P49959 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.03□□□□□ -2.41
MRE11P49959 U6.58-201ENST00000613107 107 ntBASIC-0.03□□□□□ -2.41
MRE11P49959 AL445584.3-201ENST00000617173 78 ntBASIC-0.03□□□□□ -2.41
MRE11P49959 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.04□□□□□ -2.42
MRE11P49959 RNU4-63P-201ENST00000411313 118 ntBASIC-0.04□□□□□ -2.42
MRE11P49959 MIR8064-201ENST00000612863 90 ntBASIC-0.04□□□□□ -2.42
MRE11P49959 MIR6854-201ENST00000614935 69 ntBASIC-0.04□□□□□ -2.42
MRE11P49959 MIR8068-201ENST00000618032 68 ntBASIC-0.04□□□□□ -2.42
MRE11P49959 MIR429-201ENST00000362106 83 ntBASIC-0.05□□□□□ -2.42
MRE11P49959 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.05□□□□□ -2.42
MRE11P49959 SNORD114-3-201ENST00000364969 75 ntBASIC-0.05□□□□□ -2.42
MRE11P49959 RNU6-246P-201ENST00000384702 107 ntBASIC-0.05□□□□□ -2.42
MRE11P49959 MIR1295B-201ENST00000636144 60 ntBASIC-0.05□□□□□ -2.42
MRE11P49959 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
MRE11P49959 AL445193.1-201ENST00000441183 141 ntBASIC-0.06□□□□□ -2.42
MRE11P49959 MIR3938-201ENST00000582157 103 ntBASIC-0.06□□□□□ -2.42
MRE11P49959 MIR4280-201ENST00000582178 76 ntBASIC-0.06□□□□□ -2.42
MRE11P49959 SNORA32.1-201ENST00000364514 115 ntBASIC-0.07□□□□□ -2.42
MRE11P49959 AC114755.3-201ENST00000481111 251 ntBASIC-0.07□□□□□ -2.42
MRE11P49959 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.08□□□□□ -2.42
MRE11P49959 SNORA18.1-201ENST00000363418 128 ntBASIC-0.08□□□□□ -2.42
MRE11P49959 SNORD114-12-201ENST00000365400 75 ntBASIC-0.08□□□□□ -2.42
MRE11P49959 AL590491.3-201ENST00000610731 82 ntBASIC-0.08□□□□□ -2.42
MRE11P49959 MIR3681-201ENST00000580089 72 ntBASIC-0.09□□□□□ -2.42
MRE11P49959 MIR633-201ENST00000384821 98 ntBASIC-0.1□□□□□ -2.43
MRE11P49959 MIR4320-201ENST00000636981 65 ntBASIC-0.1□□□□□ -2.43
MRE11P49959 RNU6-499P-201ENST00000365615 107 ntBASIC-0.11□□□□□ -2.43
MRE11P49959 RNA5SP66-201ENST00000517178 101 ntBASIC-0.11□□□□□ -2.43
MRE11P49959 MIR4263-201ENST00000584745 83 ntBASIC-0.11□□□□□ -2.43
MRE11P49959 SNORD1B-201ENST00000363091 84 ntBASIC-0.12□□□□□ -2.43
MRE11P49959 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
MRE11P49959 MIR6851-201ENST00000617060 67 ntBASIC-0.12□□□□□ -2.43
MRE11P49959 RNU6-231P-201ENST00000517122 103 ntBASIC-0.13□□□□□ -2.43
MRE11P49959 MIR3666-201ENST00000607845 111 ntBASIC-0.13□□□□□ -2.43
MRE11P49959 RNU6-924P-201ENST00000362926 108 ntBASIC-0.14□□□□□ -2.43
MRE11P49959 RNU6-598P-201ENST00000364017 105 ntBASIC-0.14□□□□□ -2.43
MRE11P49959 MIR124-2-201ENST00000385081 109 ntBASIC-0.14□□□□□ -2.43
MRE11P49959 SNORD4A-201ENST00000459174 72 ntBASIC-0.14□□□□□ -2.43
MRE11P49959 SNORD38.3-201ENST00000516599 73 ntBASIC-0.14□□□□□ -2.43
MRE11P49959 AC079150.2-201ENST00000443733 78 ntBASIC-0.15□□□□□ -2.43
MRE11P49959 U7.5-201ENST00000517224 61 ntBASIC-0.15□□□□□ -2.43
MRE11P49959 AC093726.3-201ENST00000637588 150 ntBASIC-0.15□□□□□ -2.43
MRE11P49959 RNU6-829P-201ENST00000363700 112 ntBASIC-0.16□□□□□ -2.44
MRE11P49959 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.16□□□□□ -2.44
MRE11P49959 RNU7-88P-201ENST00000458752 63 ntBASIC-0.16□□□□□ -2.44
MRE11P49959 RNU6-446P-201ENST00000362827 106 ntBASIC-0.17□□□□□ -2.44
MRE11P49959 RNU6-696P-201ENST00000390834 107 ntBASIC-0.17□□□□□ -2.44
MRE11P49959 RNU6-520P-201ENST00000384717 104 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 MIR587-201ENST00000384845 96 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 SNORD75.1-201ENST00000408373 60 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 RNU6-172P-201ENST00000411000 93 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 RNU7-119P-201ENST00000459279 63 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 MIR7110-201ENST00000612638 86 ntBASIC-0.18□□□□□ -2.44
MRE11P49959 RNA5SP300-201ENST00000391197 107 ntBASIC-0.19□□□□□ -2.44
MRE11P49959 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.19□□□□□ -2.44
MRE11P49959 U2.18-201ENST00000622185 84 ntBASIC-0.19□□□□□ -2.44
MRE11P49959 MIR4788-201ENST00000639104 80 ntBASIC-0.19□□□□□ -2.44
MRE11P49959 SNORD114-11-201ENST00000363738 75 ntBASIC-0.2□□□□□ -2.44
MRE11P49959 RNA5SP275-201ENST00000363936 118 ntBASIC-0.2□□□□□ -2.44
MRE11P49959 SNORD116.2-201ENST00000391251 93 ntBASIC-0.2□□□□□ -2.44
MRE11P49959 SNORD74.6-201ENST00000364796 70 ntBASIC-0.21□□□□□ -2.44
MRE11P49959 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.21□□□□□ -2.44
MRE11P49959 MIR518B-201ENST00000385127 83 ntBASIC-0.22□□□□□ -2.44
MRE11P49959 MT-TQ-201ENST00000387372 72 ntBASIC-0.22□□□□□ -2.44
MRE11P49959 RNU6-320P-201ENST00000516511 106 ntBASIC-0.22□□□□□ -2.44
MRE11P49959 MIR548AZ-201ENST00000616567 95 ntBASIC-0.22□□□□□ -2.44
MRE11P49959 RNA5SP169-201ENST00000517268 117 ntBASIC-0.23□□□□□ -2.45
MRE11P49959 SNORD22.1-201ENST00000516331 125 ntBASIC-0.24□□□□□ -2.45
MRE11P49959 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.24□□□□□ -2.45
MRE11P49959 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.24□□□□□ -2.45
MRE11P49959 SNORD18.2-201ENST00000459604 70 ntBASIC-0.25□□□□□ -2.45
MRE11P49959 RNU6-732P-201ENST00000516033 103 ntBASIC-0.25□□□□□ -2.45
MRE11P49959 SNORA40.16-201ENST00000517238 121 ntBASIC-0.25□□□□□ -2.45
MRE11P49959 MIR548AA1-201ENST00000384971 97 ntBASIC-0.26□□□□□ -2.45
MRE11P49959 MIR204-201ENST00000385200 110 ntBASIC-0.26□□□□□ -2.45
MRE11P49959 SNORD63.1-201ENST00000516178 80 ntBASIC-0.26□□□□□ -2.45
MRE11P49959 RNU6-810P-201ENST00000364001 107 ntBASIC-0.27□□□□□ -2.45
MRE11P49959 SNORA32.3-201ENST00000384772 121 ntBASIC-0.27□□□□□ -2.45
MRE11P49959 RNU7-151P-201ENST00000516930 53 ntBASIC-0.27□□□□□ -2.45
MRE11P49959 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.28□□□□□ -2.45
MRE11P49959 MIR579-201ENST00000385221 98 ntBASIC-0.28□□□□□ -2.45
MRE11P49959 SNORA40B-201ENST00000385573 128 ntBASIC-0.28□□□□□ -2.45
MRE11P49959 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.28□□□□□ -2.45
MRE11P49959 SNORA13-201ENST00000458790 133 ntBASIC-0.28□□□□□ -2.45
MRE11P49959 SNORD113-4-201ENST00000364802 75 ntBASIC-0.29□□□□□ -2.46
MRE11P49959 MIR378F-201ENST00000578143 78 ntBASIC-0.29□□□□□ -2.46
MRE11P49959 MIR3179-1-201ENST00000578940 84 ntBASIC-0.29□□□□□ -2.46
MRE11P49959 MIR3179-2-201ENST00000579107 84 ntBASIC-0.29□□□□□ -2.46
MRE11P49959 MIR3179-3-201ENST00000579566 84 ntBASIC-0.29□□□□□ -2.46
MRE11P49959 MIR3179-4-201ENST00000617599 84 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms