Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-196P-201ENST00000384315 107 ntBASIC-2.64□□□□□ -2.83
TNFP01375 RNU6-823P-201ENST00000391042 103 ntBASIC-2.64□□□□□ -2.83
TNFP01375 RNU7-61P-201ENST00000515897 61 ntBASIC-2.64□□□□□ -2.83
TNFP01375 RNU6-419P-201ENST00000517030 63 ntBASIC-2.64□□□□□ -2.83
TNFP01375 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.65□□□□□ -2.83
TNFP01375 RNU6-129P-201ENST00000391022 107 ntBASIC-2.65□□□□□ -2.83
TNFP01375 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.65□□□□□ -2.83
TNFP01375 RNU6-904P-201ENST00000516206 101 ntBASIC-2.65□□□□□ -2.83
TNFP01375 AC141273.2-201ENST00000618989 130 ntBASIC-2.65□□□□□ -2.83
TNFP01375 AC090582.1-201ENST00000636321 199 ntBASIC-2.65□□□□□ -2.83
TNFP01375 RNU6-836P-201ENST00000362920 107 ntBASIC-2.66□□□□□ -2.84
TNFP01375 RNU6-918P-201ENST00000391219 106 ntBASIC-2.66□□□□□ -2.84
TNFP01375 RNU7-30P-201ENST00000516835 62 ntBASIC-2.66□□□□□ -2.84
TNFP01375 U6.104-201ENST00000637979 90 ntBASIC-2.66□□□□□ -2.84
TNFP01375 RNU6-822P-201ENST00000362707 106 ntBASIC-2.67□□□□□ -2.84
TNFP01375 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-2.67□□□□□ -2.84
TNFP01375 MIR1252-201ENST00000408861 65 ntBASIC-2.67□□□□□ -2.84
TNFP01375 RNU6-633P-201ENST00000362612 103 ntBASIC-2.68□□□□□ -2.84
TNFP01375 RNU6-686P-201ENST00000364839 107 ntBASIC-2.68□□□□□ -2.84
TNFP01375 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.68□□□□□ -2.84
TNFP01375 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.68□□□□□ -2.84
TNFP01375 SNORA63.4-201ENST00000362763 126 ntBASIC-2.69□□□□□ -2.84
TNFP01375 RNU6-379P-201ENST00000363813 104 ntBASIC-2.69□□□□□ -2.84
TNFP01375 SCARNA23-201ENST00000516060 130 ntBASIC-2.69□□□□□ -2.84
TNFP01375 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.7□□□□□ -2.84
TNFP01375 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.7□□□□□ -2.84
TNFP01375 MTATP8P2-201ENST00000435212 202 ntBASIC-2.7□□□□□ -2.84
TNFP01375 RNU7-152P-201ENST00000458982 64 ntBASIC-2.7□□□□□ -2.84
TNFP01375 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.7□□□□□ -2.84
TNFP01375 MIR8053-201ENST00000613344 75 ntBASIC-2.7□□□□□ -2.84
TNFP01375 U7.3-201ENST00000616123 62 ntBASIC-2.7□□□□□ -2.84
TNFP01375 SNORA63.7-201ENST00000365579 123 ntBASIC-2.71□□□□□ -2.84
TNFP01375 RNU6-239P-201ENST00000390990 99 ntBASIC-2.71□□□□□ -2.84
TNFP01375 SNORD37.2-201ENST00000391075 66 ntBASIC-2.71□□□□□ -2.84
TNFP01375 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.71□□□□□ -2.84
TNFP01375 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.72□□□□□ -2.84
TNFP01375 AC093729.1-201ENST00000513074 128 ntBASIC-2.72□□□□□ -2.84
TNFP01375 RNU6-659P-201ENST00000516454 104 ntBASIC-2.72□□□□□ -2.84
TNFP01375 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC-2.72□□□□□ -2.84
TNFP01375 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.73□□□□□ -2.85
TNFP01375 SNORD45.2-201ENST00000363552 72 ntBASIC-2.73□□□□□ -2.85
TNFP01375 RNU4-85P-201ENST00000364675 123 ntBASIC-2.73□□□□□ -2.85
TNFP01375 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.73□□□□□ -2.85
TNFP01375 SNORD115.2-201ENST00000391126 59 ntBASIC-2.73□□□□□ -2.85
TNFP01375 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.73□□□□□ -2.85
TNFP01375 RNU6-314P-201ENST00000516574 104 ntBASIC-2.73□□□□□ -2.85
TNFP01375 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.74□□□□□ -2.85
TNFP01375 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.74□□□□□ -2.85
TNFP01375 RNU6-267P-201ENST00000516714 103 ntBASIC-2.74□□□□□ -2.85
TNFP01375 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.75□□□□□ -2.85
TNFP01375 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.75□□□□□ -2.85
TNFP01375 AL589823.1-201ENST00000429577 183 ntBASIC-2.75□□□□□ -2.85
TNFP01375 RNU6-542P-201ENST00000516405 103 ntBASIC-2.75□□□□□ -2.85
TNFP01375 RNU6-506P-201ENST00000516553 94 ntBASIC-2.75□□□□□ -2.85
TNFP01375 AP001340.1-201ENST00000624405 217 ntBASIC-2.75□□□□□ -2.85
TNFP01375 RNU6-797P-201ENST00000363101 109 ntBASIC-2.76□□□□□ -2.85
TNFP01375 RNU6-219P-201ENST00000364728 107 ntBASIC-2.76□□□□□ -2.85
TNFP01375 MIR590-201ENST00000385008 97 ntBASIC-2.76□□□□□ -2.85
TNFP01375 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.76□□□□□ -2.85
TNFP01375 RNU6-122P-201ENST00000516818 107 ntBASIC-2.76□□□□□ -2.85
TNFP01375 AC022559.1-201ENST00000520905 205 ntBASIC-2.76□□□□□ -2.85
TNFP01375 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.77□□□□□ -2.85
TNFP01375 Y_RNA.335-201ENST00000365299 96 ntBASIC-2.77□□□□□ -2.85
TNFP01375 RNU6-422P-201ENST00000384632 107 ntBASIC-2.77□□□□□ -2.85
TNFP01375 RNU6-277P-201ENST00000516272 106 ntBASIC-2.77□□□□□ -2.85
TNFP01375 RNU6-109P-201ENST00000516364 107 ntBASIC-2.77□□□□□ -2.85
TNFP01375 RNU6-184P-201ENST00000516514 107 ntBASIC-2.77□□□□□ -2.85
TNFP01375 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.77□□□□□ -2.85
TNFP01375 SNORA40.15-201ENST00000516884 107 ntBASIC-2.77□□□□□ -2.85
TNFP01375 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.77□□□□□ -2.85
TNFP01375 MIR4668-201ENST00000582284 70 ntBASIC-2.77□□□□□ -2.85
TNFP01375 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.77□□□□□ -2.85
TNFP01375 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.78□□□□□ -2.85
TNFP01375 AC069439.1-201ENST00000494739 167 ntBASIC-2.78□□□□□ -2.85
TNFP01375 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.8□□□□□ -2.86
TNFP01375 RNU6-411P-201ENST00000384451 107 ntBASIC-2.8□□□□□ -2.86
TNFP01375 RNU6-772P-201ENST00000516042 105 ntBASIC-2.8□□□□□ -2.86
TNFP01375 MIR548BB-201ENST00000626714 66 ntBASIC-2.8□□□□□ -2.86
TNFP01375 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.81□□□□□ -2.86
TNFP01375 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.81□□□□□ -2.86
TNFP01375 MTND2P23-201ENST00000422990 651 ntBASIC-2.81□□□□□ -2.86
TNFP01375 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.81□□□□□ -2.86
TNFP01375 AC113139.1-201ENST00000605049 239 ntBASIC-2.81□□□□□ -2.86
TNFP01375 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.82□□□□□ -2.86
TNFP01375 U6atac.1-201ENST00000616025 117 ntBASIC-2.82□□□□□ -2.86
TNFP01375 MIR1297-201ENST00000637311 77 ntBASIC-2.82□□□□□ -2.86
TNFP01375 Y_RNA.165-201ENST00000363721 102 ntBASIC-2.84□□□□□ -2.86
TNFP01375 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.84□□□□□ -2.86
TNFP01375 MIR363-201ENST00000384840 75 ntBASIC-2.84□□□□□ -2.86
TNFP01375 SNORD58.1-201ENST00000391313 66 ntBASIC-2.84□□□□□ -2.86
TNFP01375 SNORD33.1-201ENST00000516213 88 ntBASIC-2.84□□□□□ -2.86
TNFP01375 AC139792.2-201ENST00000624218 587 ntBASIC-2.84□□□□□ -2.86
TNFP01375 SNORA25.5-201ENST00000363782 126 ntBASIC-2.85□□□□□ -2.87
TNFP01375 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.85□□□□□ -2.87
TNFP01375 RNU7-107P-201ENST00000459121 61 ntBASIC-2.85□□□□□ -2.87
TNFP01375 AC113195.1-201ENST00000579952 141 ntBASIC-2.85□□□□□ -2.87
TNFP01375 U7.2-201ENST00000607576 63 ntBASIC-2.85□□□□□ -2.87
TNFP01375 MIR3688-2-201ENST00000636963 87 ntBASIC-2.85□□□□□ -2.87
TNFP01375 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.86□□□□□ -2.87
TNFP01375 SNORA19-201ENST00000384737 128 ntBASIC-2.86□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms