Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SNORD45A-201ENST00000384512 84 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 RNU6-520P-201ENST00000384717 104 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 SNORD116.2-201ENST00000391251 93 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 RNU7-197P-201ENST00000458836 62 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 RNU7-107P-201ENST00000459121 61 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.32□□□□□ -2.62
CACNA1AO00555 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 RNU6-876P-201ENST00000391295 104 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.33□□□□□ -2.62
CACNA1AO00555 MIR4680-201ENST00000580906 66 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 RNU6-810P-201ENST00000364001 107 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 RNU6-828P-201ENST00000364876 107 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 RNU6-542P-201ENST00000516405 103 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 AC139792.2-201ENST00000624218 587 ntBASIC-1.33□□□□□ -2.62
CACNA1AO00555 SNORD113.1-201ENST00000363280 73 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 SNORA19-201ENST00000384737 128 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 MIR2052-201ENST00000636055 55 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 SNORD45.2-201ENST00000363552 72 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 RNU6-713P-201ENST00000384761 107 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 MIR4668-201ENST00000582284 70 ntBASIC-1.34□□□□□ -2.62
CACNA1AO00555 SNORA8.1-201ENST00000384250 140 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 RNU6-1340P-201ENST00000384438 107 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 RNU6-789P-201ENST00000517105 102 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 MIR664A-201ENST00000626086 82 ntBASIC-1.35□□□□□ -2.63
CACNA1AO00555 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 RNU6-635P-201ENST00000516651 102 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 RNU6-574P-201ENST00000384265 107 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 SNORA40B-201ENST00000385573 128 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 RNU6-68P-201ENST00000516576 104 ntBASIC-1.36□□□□□ -2.63
CACNA1AO00555 RNU6-633P-201ENST00000362612 103 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 RNU6-887P-201ENST00000410660 100 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 MIR1297-201ENST00000637311 77 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 RNU6-772P-201ENST00000516042 105 ntBASIC-1.37□□□□□ -2.63
CACNA1AO00555 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 RNU6-196P-201ENST00000384315 107 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 RNU6-162P-201ENST00000516228 103 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 AC062037.1-201ENST00000605302 128 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 AC006160.2-201ENST00000637708 154 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 RNU6-474P-201ENST00000384243 107 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 RNU7-119P-201ENST00000459279 63 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 SNORA81.3-201ENST00000517283 198 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 AC022559.1-201ENST00000520905 205 ntBASIC-1.38□□□□□ -2.63
CACNA1AO00555 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 RNU6-895P-201ENST00000384125 103 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 RNU6-659P-201ENST00000516454 104 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 AC134503.1-201ENST00000633048 54 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 SNORA63-201ENST00000363450 132 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 Y_RNA.260-201ENST00000364628 101 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.39□□□□□ -2.63
CACNA1AO00555 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 MT-TD-201ENST00000387419 68 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 MIR548F1-201ENST00000408667 84 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 RNU6-742P-201ENST00000365289 107 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 MIR1254-1-201ENST00000408257 97 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 MTATP8P2-201ENST00000435212 202 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 U7.3-201ENST00000616123 62 ntBASIC-1.4□□□□□ -2.63
CACNA1AO00555 Y_RNA.69-201ENST00000362885 109 ntBASIC-1.41□□□□□ -2.63
CACNA1AO00555 RNU6-940P-201ENST00000363433 104 ntBASIC-1.41□□□□□ -2.63
CACNA1AO00555 RNU6-915P-201ENST00000364943 103 ntBASIC-1.41□□□□□ -2.63
CACNA1AO00555 RNU6-402P-201ENST00000410678 103 ntBASIC-1.41□□□□□ -2.63
CACNA1AO00555 RNU6-623P-201ENST00000363143 105 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 SNORD33.1-201ENST00000516213 88 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 RNU6-70P-201ENST00000516438 60 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 RNU6-426P-201ENST00000516464 97 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 RNU6-875P-201ENST00000516488 106 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 RNU6-111P-201ENST00000517179 105 ntBASIC-1.41□□□□□ -2.64
CACNA1AO00555 RNU6-867P-201ENST00000364956 107 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 SNORD42.2-201ENST00000365570 69 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 MIR154-201ENST00000385243 84 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 MIR548AI-201ENST00000579940 88 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 MIR4484-201ENST00000582855 83 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 SNORA63.4-201ENST00000362763 126 ntBASIC-1.42□□□□□ -2.64
CACNA1AO00555 RNU6-854P-201ENST00000364036 107 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms