Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MTATP8P2-201ENST00000435212 202 ntBASIC-4.25□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.652-201ENST00000458902 102 ntBASIC-4.25□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.657-201ENST00000515983 102 ntBASIC-4.25□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-772P-201ENST00000516042 105 ntBASIC-4.25□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.26□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.26□□□□□ -3.09
CHKB-CPT1BH3BT56 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4.26□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-176P-201ENST00000517196 105 ntBASIC-4.26□□□□□ -3.09
CHKB-CPT1BH3BT56 MIR4426-201ENST00000640330 63 ntBASIC-4.26□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-590P-201ENST00000365039 107 ntBASIC-4.27□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-474P-201ENST00000384243 107 ntBASIC-4.27□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-789P-201ENST00000517105 102 ntBASIC-4.27□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.28□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-686P-201ENST00000364839 107 ntBASIC-4.28□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-1211P-201ENST00000459179 105 ntBASIC-4.28□□□□□ -3.09
CHKB-CPT1BH3BT56 RNU6-1206P-201ENST00000516339 103 ntBASIC-4.28□□□□□ -3.09
CHKB-CPT1BH3BT56 MIR4760-201ENST00000585040 80 ntBASIC-4.28□□□□□ -3.09
CHKB-CPT1BH3BT56 Y_RNA.532-201ENST00000384590 113 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-985P-201ENST00000410182 104 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 Y_RNA.680-201ENST00000516441 93 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-1137P-201ENST00000517073 99 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 AC072026.1-201ENST00000605023 201 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 MIR7110-201ENST00000612638 86 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.29□□□□□ -3.1
CHKB-CPT1BH3BT56 Y_RNA.320-201ENST00000365144 102 ntBASIC-4.3□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-300P-201ENST00000459080 104 ntBASIC-4.3□□□□□ -3.1
CHKB-CPT1BH3BT56 MIR548X2-201ENST00000579776 100 ntBASIC-4.3□□□□□ -3.1
CHKB-CPT1BH3BT56 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.3□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-633P-201ENST00000362612 103 ntBASIC-4.31□□□□□ -3.1
CHKB-CPT1BH3BT56 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-4.31□□□□□ -3.1
CHKB-CPT1BH3BT56 AC093729.1-201ENST00000513074 128 ntBASIC-4.31□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-162P-201ENST00000516228 103 ntBASIC-4.31□□□□□ -3.1
CHKB-CPT1BH3BT56 U7.3-201ENST00000616123 62 ntBASIC-4.31□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU4-40P-201ENST00000364351 143 ntBASIC-4.32□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-755P-201ENST00000364400 103 ntBASIC-4.32□□□□□ -3.1
CHKB-CPT1BH3BT56 Y_RNA.586-201ENST00000391146 98 ntBASIC-4.32□□□□□ -3.1
CHKB-CPT1BH3BT56 MIRLET7A1-201ENST00000362295 80 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 SNORA63.4-201ENST00000362763 126 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-810P-201ENST00000364001 107 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 Y_RNA.200-201ENST00000364018 102 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-1296P-201ENST00000383879 107 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-635P-201ENST00000516651 102 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 MIR1297-201ENST00000637311 77 ntBASIC-4.34□□□□□ -3.1
CHKB-CPT1BH3BT56 RNU6-1325P-201ENST00000364905 105 ntBASIC-4.35□□□□□ -3.11
CHKB-CPT1BH3BT56 SNORD45A-201ENST00000384512 84 ntBASIC-4.35□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.35□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.356-201ENST00000365475 113 ntBASIC-4.36□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.36□□□□□ -3.11
CHKB-CPT1BH3BT56 RNU6-659P-201ENST00000516454 104 ntBASIC-4.36□□□□□ -3.11
CHKB-CPT1BH3BT56 SNORD45.2-201ENST00000363552 72 ntBASIC-4.37□□□□□ -3.11
CHKB-CPT1BH3BT56 RNU6-867P-201ENST00000364956 107 ntBASIC-4.37□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.39□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.107-201ENST00000363190 121 ntBASIC-4.39□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.478-201ENST00000384358 107 ntBASIC-4.39□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.580-201ENST00000391004 95 ntBASIC-4.39□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.431-201ENST00000384086 102 ntBASIC-4.4□□□□□ -3.11
CHKB-CPT1BH3BT56 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.4□□□□□ -3.11
CHKB-CPT1BH3BT56 RNU6-231P-201ENST00000517122 103 ntBASIC-4.4□□□□□ -3.11
CHKB-CPT1BH3BT56 MIR4484-201ENST00000582855 83 ntBASIC-4.4□□□□□ -3.11
CHKB-CPT1BH3BT56 MIR569-201ENST00000385228 96 ntBASIC-4.41□□□□□ -3.12
CHKB-CPT1BH3BT56 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.41□□□□□ -3.12
CHKB-CPT1BH3BT56 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.42□□□□□ -3.12
CHKB-CPT1BH3BT56 MIR4795-201ENST00000584182 89 ntBASIC-4.42□□□□□ -3.12
CHKB-CPT1BH3BT56 RNU6-92P-201ENST00000605893 104 ntBASIC-4.42□□□□□ -3.12
CHKB-CPT1BH3BT56 AL451105.1-201ENST00000450005 189 ntBASIC-4.43□□□□□ -3.12
CHKB-CPT1BH3BT56 Y_RNA.93-201ENST00000363066 109 ntBASIC-4.44□□□□□ -3.12
CHKB-CPT1BH3BT56 Y_RNA.219-201ENST00000364232 113 ntBASIC-4.44□□□□□ -3.12
CHKB-CPT1BH3BT56 MIR590-201ENST00000385008 97 ntBASIC-4.44□□□□□ -3.12
CHKB-CPT1BH3BT56 SNORA40B-201ENST00000385573 128 ntBASIC-4.44□□□□□ -3.12
CHKB-CPT1BH3BT56 SNORD33.1-201ENST00000516213 88 ntBASIC-4.44□□□□□ -3.12
CHKB-CPT1BH3BT56 RNU6-623P-201ENST00000363143 105 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 RNU6-1107P-201ENST00000364817 104 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 SNORD116-18-201ENST00000383961 92 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 Y_RNA.574-201ENST00000384766 95 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 MIR4668-201ENST00000582284 70 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 MIR3914-2-201ENST00000637339 95 ntBASIC-4.45□□□□□ -3.12
CHKB-CPT1BH3BT56 SNORD116.2-201ENST00000391251 93 ntBASIC-4.46□□□□□ -3.12
CHKB-CPT1BH3BT56 AP001318.4-201ENST00000616637 121 ntBASIC-4.46□□□□□ -3.12
CHKB-CPT1BH3BT56 RNU6-737P-201ENST00000365370 107 ntBASIC-4.47□□□□□ -3.13
CHKB-CPT1BH3BT56 Y_RNA.662-201ENST00000516028 97 ntBASIC-4.47□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-875P-201ENST00000516488 106 ntBASIC-4.48□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-111P-201ENST00000517179 105 ntBASIC-4.48□□□□□ -3.13
CHKB-CPT1BH3BT56 AC134503.1-201ENST00000633048 54 ntBASIC-4.48□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-1169P-201ENST00000363537 103 ntBASIC-4.49□□□□□ -3.13
CHKB-CPT1BH3BT56 Y_RNA.216-201ENST00000364205 93 ntBASIC-4.49□□□□□ -3.13
CHKB-CPT1BH3BT56 MIR548AI-201ENST00000579940 88 ntBASIC-4.49□□□□□ -3.13
CHKB-CPT1BH3BT56 MTND4P29-201ENST00000503122 1372 ntBASIC-4.5□□□□□ -3.13
CHKB-CPT1BH3BT56 SNORD60.1-201ENST00000362451 73 ntBASIC-4.5□□□□□ -3.13
CHKB-CPT1BH3BT56 SNORD116-24-201ENST00000384549 92 ntBASIC-4.5□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU7-107P-201ENST00000459121 61 ntBASIC-4.5□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-542P-201ENST00000516405 103 ntBASIC-4.51□□□□□ -3.13
CHKB-CPT1BH3BT56 Y_RNA.290-201ENST00000364879 114 ntBASIC-4.52□□□□□ -3.13
CHKB-CPT1BH3BT56 Y_RNA.620-201ENST00000411009 88 ntBASIC-4.52□□□□□ -3.13
CHKB-CPT1BH3BT56 Y_RNA.818-201ENST00000618813 71 ntBASIC-4.52□□□□□ -3.13
CHKB-CPT1BH3BT56 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.53□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-380P-201ENST00000410207 107 ntBASIC-4.53□□□□□ -3.13
CHKB-CPT1BH3BT56 MTATP8P1-201ENST00000467115 207 ntBASIC-4.53□□□□□ -3.13
CHKB-CPT1BH3BT56 U6.95-201ENST00000636931 70 ntBASIC-4.53□□□□□ -3.13
CHKB-CPT1BH3BT56 RNU6-497P-201ENST00000365316 104 ntBASIC-4.54□□□□□ -3.14
CHKB-CPT1BH3BT56 Y_RNA.712-201ENST00000517011 92 ntBASIC-4.54□□□□□ -3.14
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms