Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 RNA5SP170-201ENST00000517150 101 ntBASIC-1.15□□□□□ -2.59
TRBV5-4A0A0C4DH59 RNU6-696P-201ENST00000390834 107 ntBASIC-1.16□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR4490-201ENST00000582647 84 ntBASIC-1.16□□□□□ -2.6
TRBV5-4A0A0C4DH59 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR29B1-201ENST00000385015 81 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 SNORD19-201ENST00000391191 68 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 AC062037.1-201ENST00000605302 128 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR5683-201ENST00000636514 76 ntBASIC-1.17□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-787P-201ENST00000384032 107 ntBASIC-1.18□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-10P-201ENST00000384036 107 ntBASIC-1.18□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR548Q-201ENST00000408404 100 ntBASIC-1.19□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR3134-201ENST00000579433 74 ntBASIC-1.19□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR507-201ENST00000385234 94 ntBASIC-1.2□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.2□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNA5SP476-201ENST00000516613 103 ntBASIC-1.2□□□□□ -2.6
TRBV5-4A0A0C4DH59 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-411P-201ENST00000384451 107 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR3115-201ENST00000577915 68 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 U7.4-201ENST00000614961 63 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 MIR6818-201ENST00000621576 65 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.21□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.22□□□□□ -2.6
TRBV5-4A0A0C4DH59 RNU6-687P-201ENST00000516443 89 ntBASIC-1.22□□□□□ -2.6
TRBV5-4A0A0C4DH59 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORD116-16-201ENST00000384533 92 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORD116-24-201ENST00000384549 92 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 AP002795.1-201ENST00000534879 84 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 MIR4306-201ENST00000583390 91 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 MIR3202-2-201ENST00000635980 79 ntBASIC-1.23□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNU6-598P-201ENST00000364017 105 ntBASIC-1.24□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORD115-31-201ENST00000365318 82 ntBASIC-1.24□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNU6-30P-201ENST00000384561 107 ntBASIC-1.24□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORD57-201ENST00000448188 72 ntBASIC-1.24□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORD73B-201ENST00000364394 72 ntBASIC-1.25□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNA5SP192-201ENST00000364404 120 ntBASIC-1.25□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNU7-134P-201ENST00000458997 64 ntBASIC-1.25□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNA5SP26-201ENST00000362406 119 ntBASIC-1.26□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNU6-576P-201ENST00000390854 102 ntBASIC-1.26□□□□□ -2.61
TRBV5-4A0A0C4DH59 MIR8485-201ENST00000401372 91 ntBASIC-1.27□□□□□ -2.61
TRBV5-4A0A0C4DH59 MIR587-201ENST00000384845 96 ntBASIC-1.28□□□□□ -2.61
TRBV5-4A0A0C4DH59 RNU6-542P-201ENST00000516405 103 ntBASIC-1.28□□□□□ -2.61
TRBV5-4A0A0C4DH59 SNORA41B-201ENST00000384785 128 ntBASIC-1.29□□□□□ -2.62
TRBV5-4A0A0C4DH59 SNORA26.2-201ENST00000390922 122 ntBASIC-1.29□□□□□ -2.62
TRBV5-4A0A0C4DH59 MIR3165-201ENST00000579874 75 ntBASIC-1.29□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.3□□□□□ -2.62
TRBV5-4A0A0C4DH59 HAR1A.1-201ENST00000459583 118 ntBASIC-1.3□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.3□□□□□ -2.62
TRBV5-4A0A0C4DH59 MIR548AA1-201ENST00000384971 97 ntBASIC-1.31□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNY4P29-201ENST00000410801 97 ntBASIC-1.31□□□□□ -2.62
TRBV5-4A0A0C4DH59 U2.18-201ENST00000622185 84 ntBASIC-1.31□□□□□ -2.62
TRBV5-4A0A0C4DH59 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.32□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-630P-201ENST00000391258 106 ntBASIC-1.32□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNA5SP67-201ENST00000516422 131 ntBASIC-1.32□□□□□ -2.62
TRBV5-4A0A0C4DH59 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.33□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-164P-201ENST00000364604 103 ntBASIC-1.33□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.33□□□□□ -2.62
TRBV5-4A0A0C4DH59 RPL35AP4-201ENST00000412007 102 ntBASIC-1.33□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-634P-201ENST00000459134 106 ntBASIC-1.33□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-573P-201ENST00000383938 106 ntBASIC-1.34□□□□□ -2.62
TRBV5-4A0A0C4DH59 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.35□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNA5SP461-201ENST00000516451 104 ntBASIC-1.35□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-706P-201ENST00000517229 104 ntBASIC-1.35□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-92P-201ENST00000605893 104 ntBASIC-1.35□□□□□ -2.63
TRBV5-4A0A0C4DH59 SNORD1B-201ENST00000363091 84 ntBASIC-1.36□□□□□ -2.63
TRBV5-4A0A0C4DH59 AC090616.4-201ENST00000448026 115 ntBASIC-1.36□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR409-201ENST00000362237 79 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-226P-201ENST00000363778 107 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-663P-201ENST00000391105 106 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-995P-201ENST00000391244 107 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR1255A-201ENST00000408338 113 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-857P-201ENST00000515893 110 ntBASIC-1.37□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-228P-201ENST00000362700 106 ntBASIC-1.38□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-540P-201ENST00000384622 101 ntBASIC-1.38□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.38□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-279P-201ENST00000391297 101 ntBASIC-1.38□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.38□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.39□□□□□ -2.63
TRBV5-4A0A0C4DH59 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-871P-201ENST00000516122 100 ntBASIC-1.39□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR3170-201ENST00000582699 77 ntBASIC-1.39□□□□□ -2.63
TRBV5-4A0A0C4DH59 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.39□□□□□ -2.63
TRBV5-4A0A0C4DH59 RNU6-608P-201ENST00000383927 104 ntBASIC-1.4□□□□□ -2.63
TRBV5-4A0A0C4DH59 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.4□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR889-201ENST00000401280 79 ntBASIC-1.4□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR1302-4-201ENST00000408701 150 ntBASIC-1.4□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR23C-201ENST00000579846 100 ntBASIC-1.4□□□□□ -2.63
TRBV5-4A0A0C4DH59 MIR520D-201ENST00000385002 87 ntBASIC-1.41□□□□□ -2.64
TRBV5-4A0A0C4DH59 HLA-S-202ENST00000425174 53 ntBASIC-1.41□□□□□ -2.64
TRBV5-4A0A0C4DH59 RNU6-247P-201ENST00000362636 107 ntBASIC-1.42□□□□□ -2.64
TRBV5-4A0A0C4DH59 SNORD78.1-201ENST00000390866 65 ntBASIC-1.43□□□□□ -2.64
TRBV5-4A0A0C4DH59 SNORD30.1-201ENST00000391309 70 ntBASIC-1.43□□□□□ -2.64
TRBV5-4A0A0C4DH59 RNU6-172P-201ENST00000411000 93 ntBASIC-1.43□□□□□ -2.64
TRBV5-4A0A0C4DH59 AC018880.2-201ENST00000414265 201 ntBASIC-1.43□□□□□ -2.64
TRBV5-4A0A0C4DH59 RNU7-151P-201ENST00000516930 53 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms