Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 MIR527-201ENST00000385244 85 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 HLA-S-202ENST00000425174 53 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 MIR4520-1-201ENST00000582609 70 ntBASIC-0.99□□□□□ -2.57
FOXA2Q9Y261 RNU6-1216P-201ENST00000362590 107 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 RNU6-645P-201ENST00000364649 106 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 SNORA26.4-201ENST00000391188 123 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.613-201ENST00000410726 97 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 AL606753.1-201ENST00000427435 87 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 HAR1A.1-201ENST00000459583 118 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 RNU6-303P-201ENST00000517091 106 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 AC138207.3-201ENST00000585289 166 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 U2.7-201ENST00000619197 100 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1□□□□□ -2.57
FOXA2Q9Y261 SNORD115-33-201ENST00000363723 82 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-32P-201ENST00000383948 107 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-13P-201ENST00000384248 107 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-12P-201ENST00000384604 107 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-540P-201ENST00000384622 101 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-41P-201ENST00000384741 107 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 MIR3675-201ENST00000583661 73 ntBASIC-1.01□□□□□ -2.57
FOXA2Q9Y261 RNU6-686P-201ENST00000364839 107 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 MIR488-201ENST00000365739 83 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 RNU6-807P-201ENST00000516805 107 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 MIR4320-201ENST00000636981 65 ntBASIC-1.02□□□□□ -2.57
FOXA2Q9Y261 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.03□□□□□ -2.57
FOXA2Q9Y261 RNU6-330P-201ENST00000363015 107 ntBASIC-1.03□□□□□ -2.57
FOXA2Q9Y261 RNU6-640P-201ENST00000363693 105 ntBASIC-1.03□□□□□ -2.57
FOXA2Q9Y261 RNA5SP86-201ENST00000390869 98 ntBASIC-1.03□□□□□ -2.57
FOXA2Q9Y261 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.03□□□□□ -2.57
FOXA2Q9Y261 SNORA63.4-201ENST00000362763 126 ntBASIC-1.04□□□□□ -2.58
FOXA2Q9Y261 RNU6-147P-201ENST00000383983 107 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 RNU6-675P-201ENST00000384236 104 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 SNORA8.1-201ENST00000384250 140 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 MIR548C-201ENST00000384815 97 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 RNU6-129P-201ENST00000391022 107 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 AC074348.1-201ENST00000426503 132 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 MIR548AG1-201ENST00000579932 66 ntBASIC-1.05□□□□□ -2.58
FOXA2Q9Y261 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 RNU6-478P-201ENST00000363904 110 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 RNU6-215P-201ENST00000365169 102 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 SNORD20-201ENST00000384550 80 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 MIR487B-201ENST00000385021 84 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 AL603908.1-201ENST00000406098 201 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 RNU6-919P-201ENST00000516731 104 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 MIR4770-201ENST00000579149 58 ntBASIC-1.06□□□□□ -2.58
FOXA2Q9Y261 RNU6-844P-201ENST00000517175 102 ntBASIC-1.07□□□□□ -2.58
FOXA2Q9Y261 AC006160.2-201ENST00000637708 154 ntBASIC-1.07□□□□□ -2.58
FOXA2Q9Y261 RNU6-246P-201ENST00000384702 107 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 RNU6-576P-201ENST00000390854 102 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 SNORD19-201ENST00000391191 68 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 AL353691.2-201ENST00000443795 59 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 U7.5-201ENST00000517224 61 ntBASIC-1.08□□□□□ -2.58
FOXA2Q9Y261 SNORD45.1-201ENST00000363181 77 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNU6-164P-201ENST00000364604 103 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNU6-604P-201ENST00000390917 100 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNU7-88P-201ENST00000458752 63 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNU6-732P-201ENST00000516033 103 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNA5SP180-201ENST00000516181 101 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 RNU6-789P-201ENST00000517105 102 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 MIR1246-201ENST00000636535 73 ntBASIC-1.09□□□□□ -2.58
FOXA2Q9Y261 Y_RNA.532-201ENST00000384590 113 ntBASIC-1.1□□□□□ -2.59
FOXA2Q9Y261 RNU4-61P-201ENST00000411243 107 ntBASIC-1.1□□□□□ -2.59
FOXA2Q9Y261 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.1□□□□□ -2.59
FOXA2Q9Y261 MIR1297-201ENST00000637311 77 ntBASIC-1.1□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 RNU6-380P-201ENST00000410207 107 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 RPL35AP4-201ENST00000412007 102 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 AC090616.4-201ENST00000448026 115 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 RNU6-982P-201ENST00000516216 102 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 RNU7-174P-201ENST00000516248 59 ntBASIC-1.11□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.12□□□□□ -2.59
FOXA2Q9Y261 MIR507-201ENST00000385234 94 ntBASIC-1.12□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.12□□□□□ -2.59
FOXA2Q9Y261 MIR4484-201ENST00000582855 83 ntBASIC-1.12□□□□□ -2.59
FOXA2Q9Y261 MIR409-201ENST00000362237 79 ntBASIC-1.13□□□□□ -2.59
FOXA2Q9Y261 RNU6-228P-201ENST00000362700 106 ntBASIC-1.13□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.13□□□□□ -2.59
FOXA2Q9Y261 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.13□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.14□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.14□□□□□ -2.59
FOXA2Q9Y261 RNU6-168P-201ENST00000516189 101 ntBASIC-1.14□□□□□ -2.59
FOXA2Q9Y261 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.14□□□□□ -2.59
FOXA2Q9Y261 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.14□□□□□ -2.59
FOXA2Q9Y261 SNORD18.1-201ENST00000363807 70 ntBASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 MIR548H1-201ENST00000408610 102 ntBASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 IGLL4P-201ENST00000614590 133 ntBASIC-1.15□□□□□ -2.59
FOXA2Q9Y261 RNU6-44P-201ENST00000384045 107 ntBASIC-1.16□□□□□ -2.6
FOXA2Q9Y261 RNU6-458P-201ENST00000384179 107 ntBASIC-1.16□□□□□ -2.6
FOXA2Q9Y261 RNU6-587P-201ENST00000391282 106 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 180.2 ms