Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-537P-201ENST00000517277 103 ntBASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 U2.7-201ENST00000619197 100 ntBASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.17□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.18□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-752P-201ENST00000516376 102 ntBASIC-1.18□□□□□ -2.6
CYSTM1Q9H1C7 MIR4756-201ENST00000577874 78 ntBASIC-1.18□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-645P-201ENST00000364649 106 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-907P-201ENST00000390924 102 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 SNORD77.2-201ENST00000391045 68 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 AC090616.4-201ENST00000448026 115 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-659P-201ENST00000516454 104 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.19□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-478P-201ENST00000363904 110 ntBASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-164P-201ENST00000364604 103 ntBASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.2□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.21□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-681P-201ENST00000364012 104 ntBASIC-1.21□□□□□ -2.6
CYSTM1Q9H1C7 SNORA19-201ENST00000384737 128 ntBASIC-1.21□□□□□ -2.6
CYSTM1Q9H1C7 MIR487B-201ENST00000385021 84 ntBASIC-1.21□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-255P-201ENST00000516957 105 ntBASIC-1.21□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-774P-201ENST00000363238 107 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-458P-201ENST00000384179 107 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 MIR519C-201ENST00000385053 87 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 MIR1302-5-201ENST00000408164 150 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 U6.58-201ENST00000613107 107 ntBASIC-1.22□□□□□ -2.6
CYSTM1Q9H1C7 RNU6-330P-201ENST00000363015 107 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 RNA5SP405-201ENST00000363059 114 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-807P-201ENST00000516805 107 ntBASIC-1.23□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-604P-201ENST00000390917 100 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-554P-201ENST00000410466 106 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-168P-201ENST00000516189 101 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-982P-201ENST00000516216 102 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 MIR548V-201ENST00000584165 80 ntBASIC-1.24□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORD115-37-201ENST00000363768 82 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORD116-14-201ENST00000383894 92 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORD116-17-201ENST00000383929 92 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORA8.1-201ENST00000384250 140 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORD116-15-201ENST00000384445 92 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 SNORD116-19-201ENST00000384729 92 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-630P-201ENST00000391258 106 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 AC018880.2-201ENST00000414265 201 ntBASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.27□□□□□ -2.61
CYSTM1Q9H1C7 MT-TG-201ENST00000387429 68 ntBASIC-1.27□□□□□ -2.61
CYSTM1Q9H1C7 AC090425.1-201ENST00000610007 140 ntBASIC-1.27□□□□□ -2.61
CYSTM1Q9H1C7 U2.18-201ENST00000622185 84 ntBASIC-1.27□□□□□ -2.61
CYSTM1Q9H1C7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.27□□□□□ -2.61
CYSTM1Q9H1C7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.28□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.28□□□□□ -2.61
CYSTM1Q9H1C7 RNU7-174P-201ENST00000516248 59 ntBASIC-1.28□□□□□ -2.61
CYSTM1Q9H1C7 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.28□□□□□ -2.61
CYSTM1Q9H1C7 AC099654.10-201ENST00000640395 161 ntBASIC-1.28□□□□□ -2.61
CYSTM1Q9H1C7 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-194P-201ENST00000363862 105 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-106P-201ENST00000384405 107 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 MIR520D-201ENST00000385002 87 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-696P-201ENST00000390834 107 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 MIR4668-201ENST00000582284 70 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 MIR4484-201ENST00000582855 83 ntBASIC-1.29□□□□□ -2.62
CYSTM1Q9H1C7 SNORD45.1-201ENST00000363181 77 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-598P-201ENST00000364017 105 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-608P-201ENST00000383927 104 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 MIR3675-201ENST00000583661 73 ntBASIC-1.3□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.31□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.31□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.31□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.31□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 RNY1P5-201ENST00000383890 115 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 MIR630-201ENST00000384957 97 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-267P-201ENST00000516714 103 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 U4.4-201ENST00000620626 117 ntBASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.32□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-633P-201ENST00000362612 103 ntBASIC-1.33□□□□□ -2.62
CYSTM1Q9H1C7 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.33□□□□□ -2.62
CYSTM1Q9H1C7 AC093729.1-201ENST00000513074 128 ntBASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 265 ms