Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC110620.1-201ENST00000416042 228 ntBASIC0.11□□□□□ -2.39
TIMP4Q99727 MIR4432-201ENST00000581823 84 ntBASIC0.11□□□□□ -2.39
TIMP4Q99727 AL391099.1-201ENST00000624635 187 ntBASIC0.11□□□□□ -2.39
TIMP4Q99727 RNU6-900P-201ENST00000384498 102 ntBASIC0.1□□□□□ -2.39
TIMP4Q99727 MIR527-201ENST00000385244 85 ntBASIC0.1□□□□□ -2.39
TIMP4Q99727 RNU7-154P-201ENST00000516194 62 ntBASIC0.1□□□□□ -2.39
TIMP4Q99727 MIR548AG1-201ENST00000579932 66 ntBASIC0.1□□□□□ -2.39
TIMP4Q99727 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
TIMP4Q99727 Y_RNA.74-201ENST00000362911 99 ntBASIC0.09□□□□□ -2.4
TIMP4Q99727 SNORD115-23-201ENST00000364461 82 ntBASIC0.09□□□□□ -2.4
TIMP4Q99727 MIR2909-201ENST00000617113 69 ntBASIC0.09□□□□□ -2.4
TIMP4Q99727 RNU6-901P-201ENST00000384593 106 ntBASIC0.08□□□□□ -2.4
TIMP4Q99727 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.08□□□□□ -2.4
TIMP4Q99727 RNU7-55P-201ENST00000459426 62 ntBASIC0.08□□□□□ -2.4
TIMP4Q99727 SNORA41B-201ENST00000384785 128 ntBASIC0.07□□□□□ -2.4
TIMP4Q99727 AC244250.2-201ENST00000418731 148 ntBASIC0.07□□□□□ -2.4
TIMP4Q99727 MIR466-201ENST00000580653 84 ntBASIC0.07□□□□□ -2.4
TIMP4Q99727 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.07□□□□□ -2.4
TIMP4Q99727 SNORD60.1-201ENST00000362451 73 ntBASIC0.06□□□□□ -2.4
TIMP4Q99727 RNU6-973P-201ENST00000364690 107 ntBASIC0.06□□□□□ -2.4
TIMP4Q99727 Y_RNA.282-201ENST00000364793 102 ntBASIC0.06□□□□□ -2.4
TIMP4Q99727 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.06□□□□□ -2.4
TIMP4Q99727 RNU6-940P-201ENST00000363433 104 ntBASIC0.05□□□□□ -2.4
TIMP4Q99727 MIR5704-201ENST00000584029 77 ntBASIC0.05□□□□□ -2.4
TIMP4Q99727 AL445193.1-201ENST00000441183 141 ntBASIC0.04□□□□□ -2.4
TIMP4Q99727 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
TIMP4Q99727 RNU6-122P-201ENST00000516818 107 ntBASIC0.03□□□□□ -2.4
TIMP4Q99727 Y_RNA.236-201ENST00000364427 111 ntBASIC0.02□□□□□ -2.41
TIMP4Q99727 SNORD49B-201ENST00000365172 72 ntBASIC0.02□□□□□ -2.41
TIMP4Q99727 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
TIMP4Q99727 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
TIMP4Q99727 MIR655-201ENST00000362159 97 ntBASIC0.01□□□□□ -2.41
TIMP4Q99727 SNORD56B-201ENST00000384713 71 ntBASIC0.01□□□□□ -2.41
TIMP4Q99727 AC096531.1-201ENST00000419107 107 ntBASIC0.01□□□□□ -2.41
TIMP4Q99727 MIR8068-201ENST00000618032 68 ntBASIC0.01□□□□□ -2.41
TIMP4Q99727 Y_RNA.109-201ENST00000363215 102 ntBASIC0□□□□□ -2.41
TIMP4Q99727 SNORD114-12-201ENST00000365400 75 ntBASIC0□□□□□ -2.41
TIMP4Q99727 SNORA62.4-201ENST00000365504 151 ntBASIC0□□□□□ -2.41
TIMP4Q99727 RNU6-669P-201ENST00000365575 107 ntBASIC0□□□□□ -2.41
TIMP4Q99727 RNU6-46P-201ENST00000383860 107 ntBASIC0□□□□□ -2.41
TIMP4Q99727 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
TIMP4Q99727 MIR6888-201ENST00000621977 67 ntBASIC0□□□□□ -2.41
TIMP4Q99727 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 RNA5SP257-201ENST00000363023 116 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 RNU6-458P-201ENST00000384179 107 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 SNORD116-16-201ENST00000384533 92 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 U6.58-201ENST00000613107 107 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 MIR6854-201ENST00000614935 69 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
TIMP4Q99727 MIR633-201ENST00000384821 98 ntBASIC-0.02□□□□□ -2.41
TIMP4Q99727 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.02□□□□□ -2.41
TIMP4Q99727 MIR4464-201ENST00000580818 92 ntBASIC-0.02□□□□□ -2.41
TIMP4Q99727 MIR429-201ENST00000362106 83 ntBASIC-0.03□□□□□ -2.41
TIMP4Q99727 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
TIMP4Q99727 MIR3938-201ENST00000582157 103 ntBASIC-0.03□□□□□ -2.41
TIMP4Q99727 AL445584.3-201ENST00000617173 78 ntBASIC-0.03□□□□□ -2.41
TIMP4Q99727 MIR124-2-201ENST00000385081 109 ntBASIC-0.04□□□□□ -2.42
TIMP4Q99727 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
TIMP4Q99727 AC104692.1-201ENST00000472406 90 ntBASIC-0.04□□□□□ -2.42
TIMP4Q99727 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.05□□□□□ -2.42
TIMP4Q99727 RNU6-246P-201ENST00000384702 107 ntBASIC-0.05□□□□□ -2.42
TIMP4Q99727 RNU7-88P-201ENST00000458752 63 ntBASIC-0.05□□□□□ -2.42
TIMP4Q99727 MIR4280-201ENST00000582178 76 ntBASIC-0.05□□□□□ -2.42
TIMP4Q99727 SNORD38.3-201ENST00000516599 73 ntBASIC-0.06□□□□□ -2.42
TIMP4Q99727 RNU6-499P-201ENST00000365615 107 ntBASIC-0.07□□□□□ -2.42
TIMP4Q99727 AC114755.3-201ENST00000481111 251 ntBASIC-0.07□□□□□ -2.42
TIMP4Q99727 U7.5-201ENST00000517224 61 ntBASIC-0.07□□□□□ -2.42
TIMP4Q99727 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
TIMP4Q99727 SNORA18.1-201ENST00000363418 128 ntBASIC-0.09□□□□□ -2.42
TIMP4Q99727 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
TIMP4Q99727 RNA5SP66-201ENST00000517178 101 ntBASIC-0.09□□□□□ -2.42
TIMP4Q99727 MIR4263-201ENST00000584745 83 ntBASIC-0.09□□□□□ -2.42
TIMP4Q99727 RNU6-924P-201ENST00000362926 108 ntBASIC-0.1□□□□□ -2.43
TIMP4Q99727 SNORD1B-201ENST00000363091 84 ntBASIC-0.1□□□□□ -2.43
TIMP4Q99727 RNU6-598P-201ENST00000364017 105 ntBASIC-0.1□□□□□ -2.43
TIMP4Q99727 SNORD116.2-201ENST00000391251 93 ntBASIC-0.1□□□□□ -2.43
TIMP4Q99727 RNU6-231P-201ENST00000517122 103 ntBASIC-0.1□□□□□ -2.43
TIMP4Q99727 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.11□□□□□ -2.43
TIMP4Q99727 RNU6-172P-201ENST00000411000 93 ntBASIC-0.11□□□□□ -2.43
TIMP4Q99727 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
TIMP4Q99727 U2.18-201ENST00000622185 84 ntBASIC-0.11□□□□□ -2.43
TIMP4Q99727 MIR1295B-201ENST00000636144 60 ntBASIC-0.11□□□□□ -2.43
TIMP4Q99727 RNU6-829P-201ENST00000363700 112 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 SNORD4A-201ENST00000459174 72 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 MIR7110-201ENST00000612638 86 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 MIR6851-201ENST00000617060 67 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 AC093726.3-201ENST00000637588 150 ntBASIC-0.13□□□□□ -2.43
TIMP4Q99727 RNU6-446P-201ENST00000362827 106 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 AC079150.2-201ENST00000443733 78 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 SNORD18.2-201ENST00000459604 70 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 MIR3666-201ENST00000607845 111 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 MIR4788-201ENST00000639104 80 ntBASIC-0.14□□□□□ -2.43
TIMP4Q99727 MIR204-201ENST00000385200 110 ntBASIC-0.15□□□□□ -2.43
TIMP4Q99727 MIR579-201ENST00000385221 98 ntBASIC-0.15□□□□□ -2.43
TIMP4Q99727 RNU7-119P-201ENST00000459279 63 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms