Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
PKP4Q99569 AC096531.1-201ENST00000419107 107 ntBASIC-0.09□□□□□ -2.42
PKP4Q99569 AL353803.5-201ENST00000599815 141 ntBASIC-0.09□□□□□ -2.42
PKP4Q99569 RNU6-698P-201ENST00000363523 107 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 RNU6-34P-201ENST00000364874 107 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 MIR329-2-201ENST00000385029 84 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 MIR548V-201ENST00000584165 80 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.1□□□□□ -2.43
PKP4Q99569 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.11□□□□□ -2.43
PKP4Q99569 RNU6-542P-201ENST00000516405 103 ntBASIC-0.11□□□□□ -2.43
PKP4Q99569 RNA5SP285-201ENST00000516619 119 ntBASIC-0.11□□□□□ -2.43
PKP4Q99569 MIR4263-201ENST00000584745 83 ntBASIC-0.11□□□□□ -2.43
PKP4Q99569 SNORA62.4-201ENST00000365504 151 ntBASIC-0.12□□□□□ -2.43
PKP4Q99569 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
PKP4Q99569 AC005520.4-201ENST00000604337 90 ntBASIC-0.12□□□□□ -2.43
PKP4Q99569 MIR3666-201ENST00000607845 111 ntBASIC-0.12□□□□□ -2.43
PKP4Q99569 RNU6-800P-201ENST00000384473 103 ntBASIC-0.13□□□□□ -2.43
PKP4Q99569 SNORD56B-201ENST00000384713 71 ntBASIC-0.13□□□□□ -2.43
PKP4Q99569 SNORD113-2-201ENST00000391082 72 ntBASIC-0.13□□□□□ -2.43
PKP4Q99569 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.14□□□□□ -2.43
PKP4Q99569 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
PKP4Q99569 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.14□□□□□ -2.43
PKP4Q99569 MIR630-201ENST00000384957 97 ntBASIC-0.14□□□□□ -2.43
PKP4Q99569 U4.4-201ENST00000620626 117 ntBASIC-0.14□□□□□ -2.43
PKP4Q99569 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.15□□□□□ -2.43
PKP4Q99569 RNA5SP66-201ENST00000517178 101 ntBASIC-0.15□□□□□ -2.43
PKP4Q99569 AL590491.3-201ENST00000610731 82 ntBASIC-0.15□□□□□ -2.43
PKP4Q99569 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.16□□□□□ -2.44
PKP4Q99569 AL445193.1-201ENST00000441183 141 ntBASIC-0.16□□□□□ -2.44
PKP4Q99569 MIR5704-201ENST00000584029 77 ntBASIC-0.16□□□□□ -2.44
PKP4Q99569 MIR6854-201ENST00000614935 69 ntBASIC-0.16□□□□□ -2.44
PKP4Q99569 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.17□□□□□ -2.44
PKP4Q99569 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
PKP4Q99569 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.17□□□□□ -2.44
PKP4Q99569 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
PKP4Q99569 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 RNA5SP300-201ENST00000391197 107 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 MIR4511-201ENST00000582784 87 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 AC103706.3-201ENST00000636297 85 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 AC093726.3-201ENST00000637588 150 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 MIR4788-201ENST00000639104 80 ntBASIC-0.18□□□□□ -2.44
PKP4Q99569 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.19□□□□□ -2.44
PKP4Q99569 MIR4464-201ENST00000580818 92 ntBASIC-0.19□□□□□ -2.44
PKP4Q99569 AC108676.2-201ENST00000605225 163 ntBASIC-0.19□□□□□ -2.44
PKP4Q99569 MIR6851-201ENST00000617060 67 ntBASIC-0.19□□□□□ -2.44
PKP4Q99569 RNU6-590P-201ENST00000365039 107 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 MIR527-201ENST00000385244 85 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 AC114755.3-201ENST00000481111 251 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 AL445584.3-201ENST00000617173 78 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 MIR8068-201ENST00000618032 68 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 MIR6888-201ENST00000621977 67 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 MIR6759-201ENST00000638110 65 ntBASIC-0.2□□□□□ -2.44
PKP4Q99569 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
PKP4Q99569 MIR548AG1-201ENST00000579932 66 ntBASIC-0.21□□□□□ -2.44
PKP4Q99569 RNU6-92P-201ENST00000605893 104 ntBASIC-0.21□□□□□ -2.44
PKP4Q99569 MIR429-201ENST00000362106 83 ntBASIC-0.22□□□□□ -2.44
PKP4Q99569 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.22□□□□□ -2.44
PKP4Q99569 RNU6-471P-201ENST00000383944 106 ntBASIC-0.22□□□□□ -2.44
PKP4Q99569 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.22□□□□□ -2.44
PKP4Q99569 AC139453.2-201ENST00000487255 133 ntBASIC-0.23□□□□□ -2.45
PKP4Q99569 SNORD38.3-201ENST00000516599 73 ntBASIC-0.23□□□□□ -2.45
PKP4Q99569 SNORA25.5-201ENST00000363782 126 ntBASIC-0.24□□□□□ -2.45
PKP4Q99569 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.24□□□□□ -2.45
PKP4Q99569 RNU6-924P-201ENST00000362926 108 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 SNORD74.6-201ENST00000364796 70 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 RNU6-458P-201ENST00000384179 107 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 SNORD116-16-201ENST00000384533 92 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 MIR124-2-201ENST00000385081 109 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 IGLVI-20-201ENST00000519296 130 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 U6.58-201ENST00000613107 107 ntBASIC-0.25□□□□□ -2.45
PKP4Q99569 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
PKP4Q99569 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.26□□□□□ -2.45
PKP4Q99569 MIR518B-201ENST00000385127 83 ntBASIC-0.26□□□□□ -2.45
PKP4Q99569 MIR204-201ENST00000385200 110 ntBASIC-0.26□□□□□ -2.45
PKP4Q99569 SNORA13-201ENST00000458790 133 ntBASIC-0.26□□□□□ -2.45
PKP4Q99569 RNU6-246P-201ENST00000384702 107 ntBASIC-0.27□□□□□ -2.45
PKP4Q99569 SNORA41B-201ENST00000384785 128 ntBASIC-0.27□□□□□ -2.45
PKP4Q99569 SNORD60.1-201ENST00000362451 73 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 RNA5SP192-201ENST00000364404 120 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 MIR214-201ENST00000385214 110 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 AC125388.1-201ENST00000459631 156 ntBASIC-0.28□□□□□ -2.45
PKP4Q99569 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.29□□□□□ -2.46
PKP4Q99569 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.29□□□□□ -2.46
PKP4Q99569 AC110620.1-201ENST00000416042 228 ntBASIC-0.29□□□□□ -2.46
PKP4Q99569 SNORD114-31-201ENST00000363219 75 ntBASIC-0.3□□□□□ -2.46
PKP4Q99569 RNU6-940P-201ENST00000363433 104 ntBASIC-0.3□□□□□ -2.46
PKP4Q99569 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
PKP4Q99569 SNORD22.1-201ENST00000516331 125 ntBASIC-0.3□□□□□ -2.46
PKP4Q99569 RNU6-122P-201ENST00000516818 107 ntBASIC-0.3□□□□□ -2.46
PKP4Q99569 RNU6-669P-201ENST00000365575 107 ntBASIC-0.31□□□□□ -2.46
PKP4Q99569 MIR1265-201ENST00000408444 86 ntBASIC-0.31□□□□□ -2.46
PKP4Q99569 SNORD18.2-201ENST00000459604 70 ntBASIC-0.31□□□□□ -2.46
PKP4Q99569 RNA5SP169-201ENST00000517268 117 ntBASIC-0.31□□□□□ -2.46
PKP4Q99569 SNORD14C-201ENST00000365382 88 ntBASIC-0.32□□□□□ -2.46
PKP4Q99569 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.32□□□□□ -2.46
PKP4Q99569 SNORD75.1-201ENST00000408373 60 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 426.2 ms