Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 RNU6-624P-201ENST00000363411 107 ntBASIC-1.86□□□□□ -2.71
SKA1Q96BD8 SNORD115-33-201ENST00000363723 82 ntBASIC-1.86□□□□□ -2.71
SKA1Q96BD8 MALAT1.1-201ENST00000618249 95 ntBASIC-1.86□□□□□ -2.71
SKA1Q96BD8 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 MIR29B1-201ENST00000385015 81 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 SNORA26.4-201ENST00000391188 123 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 MIR8485-201ENST00000401372 91 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 MIR4441-201ENST00000582623 100 ntBASIC-1.87□□□□□ -2.71
SKA1Q96BD8 RNY4P18-201ENST00000391107 89 ntBASIC-1.88□□□□□ -2.71
SKA1Q96BD8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.88□□□□□ -2.71
SKA1Q96BD8 RNU6-656P-201ENST00000516785 107 ntBASIC-1.88□□□□□ -2.71
SKA1Q96BD8 MIR5591-201ENST00000578248 65 ntBASIC-1.89□□□□□ -2.71
SKA1Q96BD8 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.9□□□□□ -2.71
SKA1Q96BD8 RNU6-807P-201ENST00000516805 107 ntBASIC-1.91□□□□□ -2.72
SKA1Q96BD8 RNU6-557P-201ENST00000516842 110 ntBASIC-1.91□□□□□ -2.72
SKA1Q96BD8 MIR1246-201ENST00000636535 73 ntBASIC-1.92□□□□□ -2.72
SKA1Q96BD8 RNU6-402P-201ENST00000410678 103 ntBASIC-1.93□□□□□ -2.72
SKA1Q96BD8 RNU7-134P-201ENST00000458997 64 ntBASIC-1.93□□□□□ -2.72
SKA1Q96BD8 RNU6-303P-201ENST00000517091 106 ntBASIC-1.93□□□□□ -2.72
SKA1Q96BD8 RNU6-645P-201ENST00000364649 106 ntBASIC-1.94□□□□□ -2.72
SKA1Q96BD8 RNU6-219P-201ENST00000364728 107 ntBASIC-1.94□□□□□ -2.72
SKA1Q96BD8 MIR3675-201ENST00000583661 73 ntBASIC-1.94□□□□□ -2.72
SKA1Q96BD8 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.95□□□□□ -2.72
SKA1Q96BD8 RNU6-755P-201ENST00000364400 103 ntBASIC-1.95□□□□□ -2.72
SKA1Q96BD8 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.95□□□□□ -2.72
SKA1Q96BD8 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.96□□□□□ -2.72
SKA1Q96BD8 MIR548C-201ENST00000384815 97 ntBASIC-1.96□□□□□ -2.72
SKA1Q96BD8 SNORD63.1-201ENST00000516178 80 ntBASIC-1.96□□□□□ -2.72
SKA1Q96BD8 U2.7-201ENST00000619197 100 ntBASIC-1.96□□□□□ -2.72
SKA1Q96BD8 MIR548BB-201ENST00000626714 66 ntBASIC-1.96□□□□□ -2.72
SKA1Q96BD8 RNU6-686P-201ENST00000364839 107 ntBASIC-1.97□□□□□ -2.72
SKA1Q96BD8 SNORD113-1-201ENST00000365321 69 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 RNU6-32P-201ENST00000383948 107 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 RNU6-13P-201ENST00000384248 107 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 RNU6-12P-201ENST00000384604 107 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 RNU6-41P-201ENST00000384741 107 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 AL353691.2-201ENST00000443795 59 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 MIR6818-201ENST00000621576 65 ntBASIC-1.98□□□□□ -2.73
SKA1Q96BD8 RNU6-497P-201ENST00000365316 104 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 SNORA8.1-201ENST00000384250 140 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 Y_RNA.611-201ENST00000410682 108 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 RNU6-267P-201ENST00000516714 103 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 MIR4770-201ENST00000579149 58 ntBASIC-2.01□□□□□ -2.73
SKA1Q96BD8 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.02□□□□□ -2.73
SKA1Q96BD8 MIR889-201ENST00000401280 79 ntBASIC-2.02□□□□□ -2.73
SKA1Q96BD8 RNU6-380P-201ENST00000410207 107 ntBASIC-2.02□□□□□ -2.73
SKA1Q96BD8 MIR4520-1-201ENST00000582609 70 ntBASIC-2.02□□□□□ -2.73
SKA1Q96BD8 MIR527-201ENST00000385244 85 ntBASIC-2.03□□□□□ -2.73
SKA1Q96BD8 RNU6-129P-201ENST00000391022 107 ntBASIC-2.03□□□□□ -2.73
SKA1Q96BD8 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.05□□□□□ -2.74
SKA1Q96BD8 RNU6-732P-201ENST00000516033 103 ntBASIC-2.05□□□□□ -2.74
SKA1Q96BD8 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.06□□□□□ -2.74
SKA1Q96BD8 RNU4-61P-201ENST00000411243 107 ntBASIC-2.06□□□□□ -2.74
SKA1Q96BD8 AC074348.1-201ENST00000426503 132 ntBASIC-2.06□□□□□ -2.74
SKA1Q96BD8 MIRLET7A1-201ENST00000362295 80 ntBASIC-2.07□□□□□ -2.74
SKA1Q96BD8 RNU6-330P-201ENST00000363015 107 ntBASIC-2.07□□□□□ -2.74
SKA1Q96BD8 RNU6-576P-201ENST00000390854 102 ntBASIC-2.07□□□□□ -2.74
SKA1Q96BD8 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.07□□□□□ -2.74
SKA1Q96BD8 MIR1297-201ENST00000637311 77 ntBASIC-2.07□□□□□ -2.74
SKA1Q96BD8 SNORD115-22-201ENST00000364456 82 ntBASIC-2.08□□□□□ -2.74
SKA1Q96BD8 AL606753.1-201ENST00000427435 87 ntBASIC-2.08□□□□□ -2.74
SKA1Q96BD8 SNORD45.1-201ENST00000363181 77 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 RNU6-540P-201ENST00000384622 101 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 RNU6-604P-201ENST00000390917 100 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 RNU7-88P-201ENST00000458752 63 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 RNU6-844P-201ENST00000517175 102 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 U7.5-201ENST00000517224 61 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 MIR6502-201ENST00000617296 76 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 AC006160.2-201ENST00000637708 154 ntBASIC-2.09□□□□□ -2.74
SKA1Q96BD8 RNY4P27-201ENST00000363341 96 ntBASIC-2.1□□□□□ -2.75
SKA1Q96BD8 MIR488-201ENST00000365739 83 ntBASIC-2.1□□□□□ -2.75
SKA1Q96BD8 RNU6-640P-201ENST00000363693 105 ntBASIC-2.11□□□□□ -2.75
SKA1Q96BD8 RNU6-675P-201ENST00000384236 104 ntBASIC-2.11□□□□□ -2.75
SKA1Q96BD8 RNU6-246P-201ENST00000384702 107 ntBASIC-2.11□□□□□ -2.75
SKA1Q96BD8 MIR4490-201ENST00000582647 84 ntBASIC-2.11□□□□□ -2.75
SKA1Q96BD8 MIR429-201ENST00000362106 83 ntBASIC-2.12□□□□□ -2.75
SKA1Q96BD8 RNA5SP26-201ENST00000362406 119 ntBASIC-2.12□□□□□ -2.75
SKA1Q96BD8 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.12□□□□□ -2.75
SKA1Q96BD8 RNU6-919P-201ENST00000516731 104 ntBASIC-2.12□□□□□ -2.75
SKA1Q96BD8 SNORA63.4-201ENST00000362763 126 ntBASIC-2.13□□□□□ -2.75
SKA1Q96BD8 RNU6-478P-201ENST00000363904 110 ntBASIC-2.13□□□□□ -2.75
SKA1Q96BD8 RNU6-147P-201ENST00000383983 107 ntBASIC-2.13□□□□□ -2.75
SKA1Q96BD8 MIR548AG1-201ENST00000579932 66 ntBASIC-2.13□□□□□ -2.75
SKA1Q96BD8 RNU7-174P-201ENST00000516248 59 ntBASIC-2.14□□□□□ -2.75
SKA1Q96BD8 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.15□□□□□ -2.75
SKA1Q96BD8 MIR507-201ENST00000385234 94 ntBASIC-2.15□□□□□ -2.75
SKA1Q96BD8 AL603908.1-201ENST00000406098 201 ntBASIC-2.15□□□□□ -2.75
SKA1Q96BD8 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.16□□□□□ -2.76
SKA1Q96BD8 MTND4LP1-201ENST00000446263 157 ntBASIC-2.16□□□□□ -2.76
SKA1Q96BD8 MIR5683-201ENST00000636514 76 ntBASIC-2.16□□□□□ -2.76
SKA1Q96BD8 Y_RNA.74-201ENST00000362911 99 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 RNU6-215P-201ENST00000365169 102 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 RNU6-983P-201ENST00000516004 103 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 RNU6-789P-201ENST00000517105 102 ntBASIC-2.17□□□□□ -2.76
SKA1Q96BD8 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms