Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 MTND4LP1-201ENST00000446263 157 ntBASIC-0.19□□□□□ -2.44
DDX53Q86TM3 MIR4662A-201ENST00000637499 67 ntBASIC-0.19□□□□□ -2.44
DDX53Q86TM3 SNORA18.1-201ENST00000363418 128 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 RNU6-895P-201ENST00000384125 103 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 MIR548C-201ENST00000384815 97 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 snoR1.1-201ENST00000628177 80 ntBASIC-0.2□□□□□ -2.44
DDX53Q86TM3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.21□□□□□ -2.44
DDX53Q86TM3 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
DDX53Q86TM3 AL391099.1-201ENST00000624635 187 ntBASIC-0.21□□□□□ -2.44
DDX53Q86TM3 RNU6-776P-201ENST00000364403 104 ntBASIC-0.22□□□□□ -2.44
DDX53Q86TM3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.22□□□□□ -2.44
DDX53Q86TM3 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.22□□□□□ -2.44
DDX53Q86TM3 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.22□□□□□ -2.44
DDX53Q86TM3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.22□□□□□ -2.44
DDX53Q86TM3 RNU6-668P-201ENST00000364180 107 ntBASIC-0.23□□□□□ -2.45
DDX53Q86TM3 SNORD115-23-201ENST00000364461 82 ntBASIC-0.23□□□□□ -2.45
DDX53Q86TM3 MIR224-201ENST00000384889 81 ntBASIC-0.23□□□□□ -2.45
DDX53Q86TM3 U2.7-201ENST00000619197 100 ntBASIC-0.23□□□□□ -2.45
DDX53Q86TM3 RNU6-523P-201ENST00000516304 54 ntBASIC-0.24□□□□□ -2.45
DDX53Q86TM3 MIR4432-201ENST00000581823 84 ntBASIC-0.24□□□□□ -2.45
DDX53Q86TM3 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.25□□□□□ -2.45
DDX53Q86TM3 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.25□□□□□ -2.45
DDX53Q86TM3 RNU6-638P-201ENST00000516582 104 ntBASIC-0.25□□□□□ -2.45
DDX53Q86TM3 AL590491.3-201ENST00000610731 82 ntBASIC-0.25□□□□□ -2.45
DDX53Q86TM3 SNORD56B-201ENST00000384713 71 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 RNU6-634P-201ENST00000459134 106 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 RNU6-518P-201ENST00000516056 96 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 RNA5SP470-201ENST00000516463 106 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 MIR548AX-201ENST00000580117 73 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 MIR3666-201ENST00000607845 111 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 MIR8064-201ENST00000612863 90 ntBASIC-0.26□□□□□ -2.45
DDX53Q86TM3 AL445193.1-201ENST00000441183 141 ntBASIC-0.27□□□□□ -2.45
DDX53Q86TM3 MIR4263-201ENST00000584745 83 ntBASIC-0.27□□□□□ -2.45
DDX53Q86TM3 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.28□□□□□ -2.45
DDX53Q86TM3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
DDX53Q86TM3 AC096531.1-201ENST00000419107 107 ntBASIC-0.28□□□□□ -2.45
DDX53Q86TM3 AL021921.1-201ENST00000442774 93 ntBASIC-0.28□□□□□ -2.45
DDX53Q86TM3 MIR519A2-201ENST00000384990 87 ntBASIC-0.29□□□□□ -2.46
DDX53Q86TM3 AL353803.5-201ENST00000599815 141 ntBASIC-0.29□□□□□ -2.46
DDX53Q86TM3 SNORD116-24-201ENST00000384549 92 ntBASIC-0.3□□□□□ -2.46
DDX53Q86TM3 SNORD57-201ENST00000448188 72 ntBASIC-0.3□□□□□ -2.46
DDX53Q86TM3 MIR5704-201ENST00000584029 77 ntBASIC-0.3□□□□□ -2.46
DDX53Q86TM3 RNU6-871P-201ENST00000516122 100 ntBASIC-0.31□□□□□ -2.46
DDX53Q86TM3 RNU6-540P-201ENST00000384622 101 ntBASIC-0.32□□□□□ -2.46
DDX53Q86TM3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
DDX53Q86TM3 MIR1468-201ENST00000410600 86 ntBASIC-0.32□□□□□ -2.46
DDX53Q86TM3 RNU7-154P-201ENST00000516194 62 ntBASIC-0.32□□□□□ -2.46
DDX53Q86TM3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.32□□□□□ -2.46
DDX53Q86TM3 MIR4723-201ENST00000585070 81 ntBASIC-0.32□□□□□ -2.46
DDX53Q86TM3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.33□□□□□ -2.46
DDX53Q86TM3 RNU7-174P-201ENST00000516248 59 ntBASIC-0.33□□□□□ -2.46
DDX53Q86TM3 MIR4280-201ENST00000582178 76 ntBASIC-0.33□□□□□ -2.46
DDX53Q86TM3 MIR4788-201ENST00000639104 80 ntBASIC-0.33□□□□□ -2.46
DDX53Q86TM3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.34□□□□□ -2.46
DDX53Q86TM3 MIR517B-201ENST00000385102 67 ntBASIC-0.34□□□□□ -2.46
DDX53Q86TM3 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.34□□□□□ -2.46
DDX53Q86TM3 RNY1P9-201ENST00000532431 109 ntBASIC-0.34□□□□□ -2.46
DDX53Q86TM3 MIR548V-201ENST00000584165 80 ntBASIC-0.34□□□□□ -2.46
DDX53Q86TM3 RNU6-663P-201ENST00000391105 106 ntBASIC-0.35□□□□□ -2.47
DDX53Q86TM3 RNA5SP215-201ENST00000363440 122 ntBASIC-0.36□□□□□ -2.47
DDX53Q86TM3 MIR6854-201ENST00000614935 69 ntBASIC-0.36□□□□□ -2.47
DDX53Q86TM3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.36□□□□□ -2.47
DDX53Q86TM3 SNORA62.4-201ENST00000365504 151 ntBASIC-0.37□□□□□ -2.47
DDX53Q86TM3 SNORD30.1-201ENST00000391309 70 ntBASIC-0.37□□□□□ -2.47
DDX53Q86TM3 MIR8068-201ENST00000618032 68 ntBASIC-0.37□□□□□ -2.47
DDX53Q86TM3 AC093726.3-201ENST00000637588 150 ntBASIC-0.38□□□□□ -2.47
DDX53Q86TM3 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
DDX53Q86TM3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
DDX53Q86TM3 RNU6-698P-201ENST00000363523 107 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 RNU6-34P-201ENST00000364874 107 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 AC114755.3-201ENST00000481111 251 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 MIR6851-201ENST00000617060 67 ntBASIC-0.4□□□□□ -2.47
DDX53Q86TM3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.41□□□□□ -2.48
DDX53Q86TM3 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.41□□□□□ -2.48
DDX53Q86TM3 SNORD126-201ENST00000459475 77 ntBASIC-0.41□□□□□ -2.48
DDX53Q86TM3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 RNU6-649P-201ENST00000384463 107 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 MIR630-201ENST00000384957 97 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 RNU6-630P-201ENST00000391258 106 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 MIR4464-201ENST00000580818 92 ntBASIC-0.42□□□□□ -2.48
DDX53Q86TM3 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.43□□□□□ -2.48
DDX53Q86TM3 MIR548AG1-201ENST00000579932 66 ntBASIC-0.44□□□□□ -2.48
DDX53Q86TM3 U4.4-201ENST00000620626 117 ntBASIC-0.44□□□□□ -2.48
DDX53Q86TM3 MIR6888-201ENST00000621977 67 ntBASIC-0.44□□□□□ -2.48
DDX53Q86TM3 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.45□□□□□ -2.48
DDX53Q86TM3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.45□□□□□ -2.48
DDX53Q86TM3 MT-TQ-201ENST00000387372 72 ntBASIC-0.46□□□□□ -2.48
DDX53Q86TM3 AL445584.3-201ENST00000617173 78 ntBASIC-0.46□□□□□ -2.48
DDX53Q86TM3 SNORD113-2-201ENST00000391082 72 ntBASIC-0.47□□□□□ -2.48
DDX53Q86TM3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 227.9 ms