Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SNORD54-201ENST00000459159 67 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 AC020661.2-201ENST00000560114 134 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 MIR3675-201ENST00000583661 73 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.13□□□□□ -2.91
HIST1H3AP68431 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 Y_RNA.478-201ENST00000384358 107 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 RNU6-523P-201ENST00000516304 54 ntBASIC-3.14□□□□□ -2.91
HIST1H3AP68431 SNORD116-10-201ENST00000363791 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.460-201ENST00000384255 102 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 RNU6-141P-201ENST00000410499 105 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 AC072026.1-201ENST00000605023 201 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 MIR7978-201ENST00000636158 59 ntBASIC-3.15□□□□□ -2.91
HIST1H3AP68431 SNORD45.1-201ENST00000363181 77 ntBASIC-3.16□□□□□ -2.92
HIST1H3AP68431 Y_RNA.272-201ENST00000364696 102 ntBASIC-3.16□□□□□ -2.92
HIST1H3AP68431 Y_RNA.264-201ENST00000364665 102 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 Y_RNA.684-201ENST00000516510 99 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 SNORA81.3-201ENST00000517283 198 ntBASIC-3.17□□□□□ -2.92
HIST1H3AP68431 RNU6-694P-201ENST00000364071 147 ntBASIC-3.18□□□□□ -2.92
HIST1H3AP68431 RNU6-230P-201ENST00000362457 104 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 RNY1P1-201ENST00000364372 112 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 SNORA8.1-201ENST00000384250 140 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 RNY4P18-201ENST00000391107 89 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.19□□□□□ -2.92
HIST1H3AP68431 MIR202-201ENST00000362219 110 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 SNORD113-3-201ENST00000364830 72 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 Y_RNA.509-201ENST00000384506 99 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 RNU6-172P-201ENST00000411000 93 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 SCARNA23-201ENST00000516060 130 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 RNU6-111P-201ENST00000517179 105 ntBASIC-3.2□□□□□ -2.92
HIST1H3AP68431 Y_RNA.240-201ENST00000364469 95 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.21□□□□□ -2.92
HIST1H3AP68431 SNORD60-201ENST00000383903 83 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-574P-201ENST00000384265 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 RNU6-649P-201ENST00000384463 107 ntBASIC-3.22□□□□□ -2.92
HIST1H3AP68431 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.291-201ENST00000364886 113 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.350-201ENST00000365409 98 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU6-520P-201ENST00000384717 104 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR519C-201ENST00000385053 87 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR125B1-201ENST00000385236 88 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 Y_RNA.649-201ENST00000459077 103 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU7-61P-201ENST00000515897 61 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU6-162P-201ENST00000516228 103 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 MIR3128-201ENST00000581957 66 ntBASIC-3.23□□□□□ -2.93
HIST1H3AP68431 RNU4-40P-201ENST00000364351 143 ntBASIC-3.24□□□□□ -2.93
HIST1H3AP68431 MTND4LP1-201ENST00000446263 157 ntBASIC-3.24□□□□□ -2.93
HIST1H3AP68431 AL157777.2-201ENST00000258070 137 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 RNA5SP215-201ENST00000363440 122 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.25□□□□□ -2.93
HIST1H3AP68431 RNU6-772P-201ENST00000516042 105 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 MIR548X2-201ENST00000579776 100 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 MIR548S-201ENST00000581352 82 ntBASIC-3.25□□□□□ -2.93
HIST1H3AP68431 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.26□□□□□ -2.93
HIST1H3AP68431 Y_RNA.720-201ENST00000517166 92 ntBASIC-3.26□□□□□ -2.93
HIST1H3AP68431 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 RNU6-668P-201ENST00000364180 107 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 RNU6-106P-201ENST00000384405 107 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 MIR548F4-201ENST00000408515 105 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 MIR548N-201ENST00000408742 75 ntBASIC-3.27□□□□□ -2.93
HIST1H3AP68431 Y_RNA.443-201ENST00000384135 111 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 Y_RNA.459-201ENST00000384251 102 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 Y_RNA.662-201ENST00000516028 97 ntBASIC-3.28□□□□□ -2.93
HIST1H3AP68431 RNA5SP93-201ENST00000362525 114 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.47-201ENST00000362697 108 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 SNORA20.1-201ENST00000364790 130 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 RNU6-904P-201ENST00000516206 101 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.680-201ENST00000516441 93 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.29□□□□□ -2.94
HIST1H3AP68431 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 SNORD116-18-201ENST00000383961 92 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 RNU6-303P-201ENST00000517091 106 ntBASIC-3.3□□□□□ -2.94
HIST1H3AP68431 RNU6-912P-201ENST00000363800 104 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNA5SP173-201ENST00000364857 136 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNU6-182P-201ENST00000516970 105 ntBASIC-3.31□□□□□ -2.94
HIST1H3AP68431 RNU6-1023P-201ENST00000516137 106 ntBASIC-3.32□□□□□ -2.94
HIST1H3AP68431 RNU6-624P-201ENST00000363411 107 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 SNORD115-37-201ENST00000363768 82 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 SNORA17.4-201ENST00000391287 132 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 U7.3-201ENST00000616123 62 ntBASIC-3.33□□□□□ -2.94
HIST1H3AP68431 Y_RNA.149-201ENST00000363558 117 ntBASIC-3.34□□□□□ -2.94
HIST1H3AP68431 RNU6-1211P-201ENST00000459179 105 ntBASIC-3.34□□□□□ -2.94
HIST1H3AP68431 SNORD113.1-201ENST00000363280 73 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.580-201ENST00000391004 95 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.586-201ENST00000391146 98 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 AC074348.1-201ENST00000426503 132 ntBASIC-3.36□□□□□ -2.95
HIST1H3AP68431 Y_RNA.228-201ENST00000364346 98 ntBASIC-3.37□□□□□ -2.95
HIST1H3AP68431 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 Y_RNA.297-201ENST00000364950 91 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 MIR569-201ENST00000385228 96 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 RNU7-107P-201ENST00000459121 61 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 Y_RNA.668-201ENST00000516233 93 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 RNU6-1191P-201ENST00000516799 107 ntBASIC-3.38□□□□□ -2.95
HIST1H3AP68431 MIR4484-201ENST00000582855 83 ntBASIC-3.38□□□□□ -2.95
Retrieved 100 of 98,524 protein–RNA pairs in 398.5 ms