Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR517B-201ENST00000385102 67 ntBASIC0.05□□□□□ -2.4
HERVK_113P62684 AL021921.1-201ENST00000442774 93 ntBASIC0.05□□□□□ -2.4
HERVK_113P62684 SNORA25.4-201ENST00000363666 124 ntBASIC0.04□□□□□ -2.4
HERVK_113P62684 RNU6-800P-201ENST00000384473 103 ntBASIC0.04□□□□□ -2.4
HERVK_113P62684 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
HERVK_113P62684 RNU6-1133P-201ENST00000410963 100 ntBASIC0.03□□□□□ -2.4
HERVK_113P62684 AC005520.4-201ENST00000604337 90 ntBASIC0.03□□□□□ -2.4
HERVK_113P62684 Y_RNA.375-201ENST00000365625 101 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 MIR519A2-201ENST00000384990 87 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 RNU7-174P-201ENST00000516248 59 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 RNA5SP470-201ENST00000516463 106 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 MIR4493-201ENST00000584016 73 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 AP001180.6-201ENST00000584918 159 ntBASIC0.02□□□□□ -2.41
HERVK_113P62684 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
HERVK_113P62684 RNU6-900P-201ENST00000384498 102 ntBASIC0.01□□□□□ -2.41
HERVK_113P62684 MIR604-201ENST00000384880 94 ntBASIC0.01□□□□□ -2.41
HERVK_113P62684 MIR630-201ENST00000384957 97 ntBASIC0.01□□□□□ -2.41
HERVK_113P62684 AC244250.2-201ENST00000418731 148 ntBASIC0.01□□□□□ -2.41
HERVK_113P62684 RNU6-302P-201ENST00000365249 107 ntBASIC0□□□□□ -2.41
HERVK_113P62684 RNU6-901P-201ENST00000384593 106 ntBASIC0□□□□□ -2.41
HERVK_113P62684 MIR9-2-201ENST00000384838 87 ntBASIC0□□□□□ -2.41
HERVK_113P62684 AL391099.1-201ENST00000624635 187 ntBASIC0□□□□□ -2.41
HERVK_113P62684 RNU7-55P-201ENST00000459426 62 ntBASIC-0.01□□□□□ -2.41
HERVK_113P62684 RNU6-542P-201ENST00000516405 103 ntBASIC-0.01□□□□□ -2.41
HERVK_113P62684 MIR4432-201ENST00000581823 84 ntBASIC-0.01□□□□□ -2.41
HERVK_113P62684 AC108676.2-201ENST00000605225 163 ntBASIC-0.01□□□□□ -2.41
HERVK_113P62684 SNORD49B-201ENST00000365172 72 ntBASIC-0.02□□□□□ -2.41
HERVK_113P62684 RNU6-46P-201ENST00000383860 107 ntBASIC-0.02□□□□□ -2.41
HERVK_113P62684 RNU6-698P-201ENST00000363523 107 ntBASIC-0.03□□□□□ -2.41
HERVK_113P62684 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.03□□□□□ -2.41
HERVK_113P62684 RNU6-34P-201ENST00000364874 107 ntBASIC-0.03□□□□□ -2.41
HERVK_113P62684 AC104692.1-201ENST00000472406 90 ntBASIC-0.03□□□□□ -2.41
HERVK_113P62684 AL353803.5-201ENST00000599815 141 ntBASIC-0.03□□□□□ -2.41
HERVK_113P62684 SNORD115-23-201ENST00000364461 82 ntBASIC-0.04□□□□□ -2.42
HERVK_113P62684 RNU6-973P-201ENST00000364690 107 ntBASIC-0.04□□□□□ -2.42
HERVK_113P62684 SNORD113-2-201ENST00000391082 72 ntBASIC-0.04□□□□□ -2.42
HERVK_113P62684 RNU7-154P-201ENST00000516194 62 ntBASIC-0.04□□□□□ -2.42
HERVK_113P62684 MIR409-201ENST00000362237 79 ntBASIC-0.05□□□□□ -2.42
HERVK_113P62684 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
HERVK_113P62684 SNORD95.1-201ENST00000364099 68 ntBASIC-0.06□□□□□ -2.42
HERVK_113P62684 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.06□□□□□ -2.42
HERVK_113P62684 AL445193.1-201ENST00000441183 141 ntBASIC-0.06□□□□□ -2.42
HERVK_113P62684 RNA5SP67-201ENST00000516422 131 ntBASIC-0.06□□□□□ -2.42
HERVK_113P62684 SNORD114-12-201ENST00000365400 75 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 MIR214-201ENST00000385214 110 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 AC139453.2-201ENST00000487255 133 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 MIR4645-201ENST00000583158 77 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 U4.4-201ENST00000620626 117 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
HERVK_113P62684 MIR101-1-201ENST00000362265 75 ntBASIC-0.08□□□□□ -2.42
HERVK_113P62684 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.08□□□□□ -2.42
HERVK_113P62684 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.08□□□□□ -2.42
HERVK_113P62684 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.08□□□□□ -2.42
HERVK_113P62684 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.08□□□□□ -2.42
HERVK_113P62684 MIR655-201ENST00000362159 97 ntBASIC-0.09□□□□□ -2.42
HERVK_113P62684 RNU6-590P-201ENST00000365039 107 ntBASIC-0.09□□□□□ -2.42
HERVK_113P62684 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
HERVK_113P62684 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.09□□□□□ -2.42
HERVK_113P62684 MIR4511-201ENST00000582784 87 ntBASIC-0.09□□□□□ -2.42
HERVK_113P62684 MIR5704-201ENST00000584029 77 ntBASIC-0.09□□□□□ -2.42
HERVK_113P62684 AC103706.3-201ENST00000636297 85 ntBASIC-0.1□□□□□ -2.43
HERVK_113P62684 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.11□□□□□ -2.43
HERVK_113P62684 SNORD56B-201ENST00000384713 71 ntBASIC-0.11□□□□□ -2.43
HERVK_113P62684 AC096531.1-201ENST00000419107 107 ntBASIC-0.11□□□□□ -2.43
HERVK_113P62684 RPS29P8-201ENST00000445109 171 ntBASIC-0.11□□□□□ -2.43
HERVK_113P62684 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
HERVK_113P62684 SNORA62.4-201ENST00000365504 151 ntBASIC-0.12□□□□□ -2.43
HERVK_113P62684 MIR527-201ENST00000385244 85 ntBASIC-0.12□□□□□ -2.43
HERVK_113P62684 RNA5SP266-201ENST00000410273 108 ntBASIC-0.13□□□□□ -2.43
HERVK_113P62684 AC125388.1-201ENST00000459631 156 ntBASIC-0.13□□□□□ -2.43
HERVK_113P62684 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 SNORD114-28-201ENST00000363610 72 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 MIR548AG1-201ENST00000579932 66 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 MIR4263-201ENST00000584745 83 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 RNU6-92P-201ENST00000605893 104 ntBASIC-0.14□□□□□ -2.43
HERVK_113P62684 RNU6-471P-201ENST00000383944 106 ntBASIC-0.15□□□□□ -2.43
HERVK_113P62684 MIR6854-201ENST00000614935 69 ntBASIC-0.15□□□□□ -2.43
HERVK_113P62684 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.16□□□□□ -2.44
HERVK_113P62684 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
HERVK_113P62684 MIR8068-201ENST00000618032 68 ntBASIC-0.16□□□□□ -2.44
HERVK_113P62684 SNORA25.5-201ENST00000363782 126 ntBASIC-0.17□□□□□ -2.44
HERVK_113P62684 RNA5SP451-201ENST00000410588 110 ntBASIC-0.17□□□□□ -2.44
HERVK_113P62684 RNA5SP192-201ENST00000364404 120 ntBASIC-0.18□□□□□ -2.44
HERVK_113P62684 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
HERVK_113P62684 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
HERVK_113P62684 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
HERVK_113P62684 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.19□□□□□ -2.44
HERVK_113P62684 MIR4280-201ENST00000582178 76 ntBASIC-0.19□□□□□ -2.44
HERVK_113P62684 MIR8064-201ENST00000612863 90 ntBASIC-0.19□□□□□ -2.44
HERVK_113P62684 MIR6888-201ENST00000621977 67 ntBASIC-0.19□□□□□ -2.44
HERVK_113P62684 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.2□□□□□ -2.44
HERVK_113P62684 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
HERVK_113P62684 MIR4464-201ENST00000580818 92 ntBASIC-0.2□□□□□ -2.44
HERVK_113P62684 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
HERVK_113P62684 AL445584.3-201ENST00000617173 78 ntBASIC-0.2□□□□□ -2.44
HERVK_113P62684 MIR429-201ENST00000362106 83 ntBASIC-0.21□□□□□ -2.44
HERVK_113P62684 SNORA41B-201ENST00000384785 128 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms