Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 MIR1265-201ENST00000408444 86 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 AL021921.1-201ENST00000442774 93 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 MTND4LP1-201ENST00000446263 157 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 MIR4263-201ENST00000584745 83 ntBASIC-0.24□□□□□ -2.45
CLCN3P51790 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 RNU6-540P-201ENST00000384622 101 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 RNU6-638P-201ENST00000516582 104 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 RNA5SP66-201ENST00000517178 101 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 MIR4636-201ENST00000582271 80 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
CLCN3P51790 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.26□□□□□ -2.45
CLCN3P51790 RNU6-518P-201ENST00000516056 96 ntBASIC-0.26□□□□□ -2.45
CLCN3P51790 MIR4662A-201ENST00000637499 67 ntBASIC-0.26□□□□□ -2.45
CLCN3P51790 RNA5SP215-201ENST00000363440 122 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 MIR889-201ENST00000401280 79 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 SNORD38.3-201ENST00000516599 73 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 RNA5SP169-201ENST00000517268 117 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 MIR4788-201ENST00000639104 80 ntBASIC-0.27□□□□□ -2.45
CLCN3P51790 RNU6-668P-201ENST00000364180 107 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 SNORA62.4-201ENST00000365504 151 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 RNU6-901P-201ENST00000384593 106 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 MIR548AG1-201ENST00000579932 66 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 MIR6854-201ENST00000614935 69 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 snoR1.1-201ENST00000628177 80 ntBASIC-0.28□□□□□ -2.45
CLCN3P51790 U4.4-201ENST00000620626 117 ntBASIC-0.29□□□□□ -2.46
CLCN3P51790 MIR6888-201ENST00000621977 67 ntBASIC-0.29□□□□□ -2.46
CLCN3P51790 MIR6086-201ENST00000638065 55 ntBASIC-0.29□□□□□ -2.46
CLCN3P51790 RNU6-698P-201ENST00000363523 107 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 RNU6-34P-201ENST00000364874 107 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 Z95118.1-201ENST00000421372 247 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 MIR4802-201ENST00000581881 80 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 AL445584.3-201ENST00000617173 78 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 AC093726.3-201ENST00000637588 150 ntBASIC-0.3□□□□□ -2.46
CLCN3P51790 RNU6-895P-201ENST00000384125 103 ntBASIC-0.31□□□□□ -2.46
CLCN3P51790 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.31□□□□□ -2.46
CLCN3P51790 MIR517B-201ENST00000385102 67 ntBASIC-0.31□□□□□ -2.46
CLCN3P51790 MIR548V-201ENST00000584165 80 ntBASIC-0.31□□□□□ -2.46
CLCN3P51790 AP001180.6-201ENST00000584918 159 ntBASIC-0.31□□□□□ -2.46
CLCN3P51790 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.32□□□□□ -2.46
CLCN3P51790 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.32□□□□□ -2.46
CLCN3P51790 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.33□□□□□ -2.46
CLCN3P51790 RNU6-871P-201ENST00000516122 100 ntBASIC-0.33□□□□□ -2.46
CLCN3P51790 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.34□□□□□ -2.46
CLCN3P51790 SNORD14C-201ENST00000365382 88 ntBASIC-0.34□□□□□ -2.46
CLCN3P51790 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.34□□□□□ -2.46
CLCN3P51790 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 SNORD74.6-201ENST00000364796 70 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 RNU6-663P-201ENST00000391105 106 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 RNU6-758P-201ENST00000516292 89 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 MIR8064-201ENST00000612863 90 ntBASIC-0.35□□□□□ -2.47
CLCN3P51790 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.36□□□□□ -2.47
CLCN3P51790 MIR548C-201ENST00000384815 97 ntBASIC-0.36□□□□□ -2.47
CLCN3P51790 SNORA13-201ENST00000458790 133 ntBASIC-0.36□□□□□ -2.47
CLCN3P51790 RNA5SP476-201ENST00000516613 103 ntBASIC-0.36□□□□□ -2.47
CLCN3P51790 MIR4493-201ENST00000584016 73 ntBASIC-0.36□□□□□ -2.47
CLCN3P51790 RNU6-246P-201ENST00000384702 107 ntBASIC-0.37□□□□□ -2.47
CLCN3P51790 HAR1A.1-201ENST00000459583 118 ntBASIC-0.37□□□□□ -2.47
CLCN3P51790 RNU6-539P-201ENST00000516665 103 ntBASIC-0.37□□□□□ -2.47
CLCN3P51790 AC108676.2-201ENST00000605225 163 ntBASIC-0.37□□□□□ -2.47
CLCN3P51790 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 MIR604-201ENST00000384880 94 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 MIR196A2-201ENST00000385189 110 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 SNORD126-201ENST00000459475 77 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
CLCN3P51790 MIR630-201ENST00000384957 97 ntBASIC-0.39□□□□□ -2.47
CLCN3P51790 MIR124-2-201ENST00000385081 109 ntBASIC-0.39□□□□□ -2.47
CLCN3P51790 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.39□□□□□ -2.47
CLCN3P51790 AC005520.4-201ENST00000604337 90 ntBASIC-0.39□□□□□ -2.47
CLCN3P51790 U6.111-201ENST00000636093 83 ntBASIC-0.39□□□□□ -2.47
CLCN3P51790 SNORA25.4-201ENST00000363666 124 ntBASIC-0.4□□□□□ -2.47
CLCN3P51790 MIR518B-201ENST00000385127 83 ntBASIC-0.4□□□□□ -2.47
CLCN3P51790 RNU6-630P-201ENST00000391258 106 ntBASIC-0.4□□□□□ -2.47
CLCN3P51790 RNU6-721P-201ENST00000410155 105 ntBASIC-0.4□□□□□ -2.47
CLCN3P51790 SNORD22.1-201ENST00000516331 125 ntBASIC-0.4□□□□□ -2.47
CLCN3P51790 MIR101-1-201ENST00000362265 75 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 RNU6-649P-201ENST00000384463 107 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 SNORD113-2-201ENST00000391082 72 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 SNORD30.1-201ENST00000391309 70 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 RNA5SP25-201ENST00000410815 110 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 snoU13.19-201ENST00000459148 104 ntBASIC-0.41□□□□□ -2.48
CLCN3P51790 RNA5SP368-201ENST00000364298 116 ntBASIC-0.42□□□□□ -2.48
CLCN3P51790 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.42□□□□□ -2.48
CLCN3P51790 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.42□□□□□ -2.48
CLCN3P51790 MIR4436A-201ENST00000585278 85 ntBASIC-0.42□□□□□ -2.48
CLCN3P51790 SNORD114-14-201ENST00000362723 75 ntBASIC-0.43□□□□□ -2.48
CLCN3P51790 MIR204-201ENST00000385200 110 ntBASIC-0.43□□□□□ -2.48
CLCN3P51790 SNORD75.1-201ENST00000408373 60 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms