Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPS29P8-201ENST00000445109 171 ntBASIC-0.25□□□□□ -2.45
SOX2P48431 RNU6-881P-201ENST00000516813 102 ntBASIC-0.25□□□□□ -2.45
SOX2P48431 RNU6-895P-201ENST00000384125 103 ntBASIC-0.26□□□□□ -2.45
SOX2P48431 MIR548C-201ENST00000384815 97 ntBASIC-0.26□□□□□ -2.45
SOX2P48431 RNA5SP451-201ENST00000410588 110 ntBASIC-0.26□□□□□ -2.45
SOX2P48431 RNU6-687P-201ENST00000516443 89 ntBASIC-0.26□□□□□ -2.45
SOX2P48431 SNORD56B-201ENST00000384713 71 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 AC096531.1-201ENST00000419107 107 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 AL021921.1-201ENST00000442774 93 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 RNA5SP66-201ENST00000517178 101 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 AL590491.3-201ENST00000610731 82 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 AL627230.5-201ENST00000619807 58 ntBASIC-0.27□□□□□ -2.45
SOX2P48431 RNU6-668P-201ENST00000364180 107 ntBASIC-0.28□□□□□ -2.45
SOX2P48431 MIR224-201ENST00000384889 81 ntBASIC-0.28□□□□□ -2.45
SOX2P48431 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
SOX2P48431 AL445193.1-201ENST00000441183 141 ntBASIC-0.28□□□□□ -2.45
SOX2P48431 MIR4788-201ENST00000639104 80 ntBASIC-0.28□□□□□ -2.45
SOX2P48431 RNU6-518P-201ENST00000516056 96 ntBASIC-0.29□□□□□ -2.46
SOX2P48431 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.29□□□□□ -2.46
SOX2P48431 U2.7-201ENST00000619197 100 ntBASIC-0.29□□□□□ -2.46
SOX2P48431 MIR4662A-201ENST00000637499 67 ntBASIC-0.29□□□□□ -2.46
SOX2P48431 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.3□□□□□ -2.46
SOX2P48431 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.3□□□□□ -2.46
SOX2P48431 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
SOX2P48431 RNU7-154P-201ENST00000516194 62 ntBASIC-0.3□□□□□ -2.46
SOX2P48431 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.3□□□□□ -2.46
SOX2P48431 AL353803.5-201ENST00000599815 141 ntBASIC-0.3□□□□□ -2.46
SOX2P48431 SNORD115-31-201ENST00000365318 82 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 SNORA62.4-201ENST00000365504 151 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 MIR889-201ENST00000401280 79 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 SNORD57-201ENST00000448188 72 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 AC093726.3-201ENST00000637588 150 ntBASIC-0.31□□□□□ -2.46
SOX2P48431 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
SOX2P48431 MIR6854-201ENST00000614935 69 ntBASIC-0.32□□□□□ -2.46
SOX2P48431 MIR519A2-201ENST00000384990 87 ntBASIC-0.33□□□□□ -2.46
SOX2P48431 MIR4280-201ENST00000582178 76 ntBASIC-0.33□□□□□ -2.46
SOX2P48431 MIR5704-201ENST00000584029 77 ntBASIC-0.33□□□□□ -2.46
SOX2P48431 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.33□□□□□ -2.46
SOX2P48431 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
SOX2P48431 SNORD95.1-201ENST00000364099 68 ntBASIC-0.34□□□□□ -2.46
SOX2P48431 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.34□□□□□ -2.46
SOX2P48431 RNU6-634P-201ENST00000459134 106 ntBASIC-0.34□□□□□ -2.46
SOX2P48431 RNU6-871P-201ENST00000516122 100 ntBASIC-0.34□□□□□ -2.46
SOX2P48431 RNA5SP215-201ENST00000363440 122 ntBASIC-0.35□□□□□ -2.47
SOX2P48431 RNU6-776P-201ENST00000364403 104 ntBASIC-0.35□□□□□ -2.47
SOX2P48431 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.35□□□□□ -2.47
SOX2P48431 MIR517B-201ENST00000385102 67 ntBASIC-0.35□□□□□ -2.47
SOX2P48431 MIR6851-201ENST00000617060 67 ntBASIC-0.35□□□□□ -2.47
SOX2P48431 RNU4-63P-201ENST00000411313 118 ntBASIC-0.36□□□□□ -2.47
SOX2P48431 MIR3681-201ENST00000580089 72 ntBASIC-0.36□□□□□ -2.47
SOX2P48431 SNORD75.1-201ENST00000408373 60 ntBASIC-0.37□□□□□ -2.47
SOX2P48431 RNU7-174P-201ENST00000516248 59 ntBASIC-0.37□□□□□ -2.47
SOX2P48431 RNU6-523P-201ENST00000516304 54 ntBASIC-0.37□□□□□ -2.47
SOX2P48431 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
SOX2P48431 SNORD116-24-201ENST00000384549 92 ntBASIC-0.38□□□□□ -2.47
SOX2P48431 SNORD38.3-201ENST00000516599 73 ntBASIC-0.38□□□□□ -2.47
SOX2P48431 MIR204-201ENST00000385200 110 ntBASIC-0.39□□□□□ -2.47
SOX2P48431 AC114755.3-201ENST00000481111 251 ntBASIC-0.39□□□□□ -2.47
SOX2P48431 MIR548AZ-201ENST00000616567 95 ntBASIC-0.39□□□□□ -2.47
SOX2P48431 RNU6-698P-201ENST00000363523 107 ntBASIC-0.4□□□□□ -2.47
SOX2P48431 RNU6-34P-201ENST00000364874 107 ntBASIC-0.4□□□□□ -2.47
SOX2P48431 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
SOX2P48431 MIR548V-201ENST00000584165 80 ntBASIC-0.4□□□□□ -2.47
SOX2P48431 MIR8068-201ENST00000618032 68 ntBASIC-0.4□□□□□ -2.47
SOX2P48431 MIR409-201ENST00000362237 79 ntBASIC-0.41□□□□□ -2.48
SOX2P48431 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.41□□□□□ -2.48
SOX2P48431 RNU6-540P-201ENST00000384622 101 ntBASIC-0.41□□□□□ -2.48
SOX2P48431 RNU6-663P-201ENST00000391105 106 ntBASIC-0.41□□□□□ -2.48
SOX2P48431 RNU6-638P-201ENST00000516582 104 ntBASIC-0.41□□□□□ -2.48
SOX2P48431 RNA5SP331-201ENST00000364986 107 ntBASIC-0.42□□□□□ -2.48
SOX2P48431 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.42□□□□□ -2.48
SOX2P48431 MIR518B-201ENST00000385127 83 ntBASIC-0.42□□□□□ -2.48
SOX2P48431 RNA5SP266-201ENST00000410273 108 ntBASIC-0.42□□□□□ -2.48
SOX2P48431 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.43□□□□□ -2.48
SOX2P48431 SNORD30.1-201ENST00000391309 70 ntBASIC-0.43□□□□□ -2.48
SOX2P48431 SNORA13-201ENST00000458790 133 ntBASIC-0.43□□□□□ -2.48
SOX2P48431 MIR4464-201ENST00000580818 92 ntBASIC-0.43□□□□□ -2.48
SOX2P48431 MIR6888-201ENST00000621977 67 ntBASIC-0.43□□□□□ -2.48
SOX2P48431 SNORD74.6-201ENST00000364796 70 ntBASIC-0.44□□□□□ -2.48
SOX2P48431 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
SOX2P48431 RNY1P9-201ENST00000532431 109 ntBASIC-0.44□□□□□ -2.48
SOX2P48431 AL445584.3-201ENST00000617173 78 ntBASIC-0.44□□□□□ -2.48
SOX2P48431 SNORD113-2-201ENST00000391082 72 ntBASIC-0.45□□□□□ -2.48
SOX2P48431 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 MIR630-201ENST00000384957 97 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 MIR124-2-201ENST00000385081 109 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 MIR548AX-201ENST00000580117 73 ntBASIC-0.46□□□□□ -2.48
SOX2P48431 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.47□□□□□ -2.48
SOX2P48431 RNU6-649P-201ENST00000384463 107 ntBASIC-0.47□□□□□ -2.48
SOX2P48431 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.48
SOX2P48431 U4.4-201ENST00000620626 117 ntBASIC-0.47□□□□□ -2.48
SOX2P48431 RNU6-924P-201ENST00000362926 108 ntBASIC-0.48□□□□□ -2.49
SOX2P48431 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.48□□□□□ -2.49
SOX2P48431 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.48□□□□□ -2.49
SOX2P48431 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms