Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 Y_RNA.74-201ENST00000362911 99 ntBASIC0.11□□□□□ -2.39
MMP13P45452 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
MMP13P45452 SNORD56B-201ENST00000384713 71 ntBASIC0.11□□□□□ -2.39
MMP13P45452 RNU6-900P-201ENST00000384498 102 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR4432-201ENST00000581823 84 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR8087-201ENST00000612745 78 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR6888-201ENST00000621977 67 ntBASIC0.1□□□□□ -2.39
MMP13P45452 AL391099.1-201ENST00000624635 187 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNA5SP470-201ENST00000516463 106 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU6-122P-201ENST00000516818 107 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU6-973P-201ENST00000364690 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 RNU6-246P-201ENST00000384702 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 MIR633-201ENST00000384821 98 ntBASIC0.08□□□□□ -2.4
MMP13P45452 AC096531.1-201ENST00000419107 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 MIR466-201ENST00000580653 84 ntBASIC0.08□□□□□ -2.4
MMP13P45452 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
MMP13P45452 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
MMP13P45452 MIR6779-201ENST00000617283 64 ntBASIC0.07□□□□□ -2.4
MMP13P45452 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
MMP13P45452 RNU6-446P-201ENST00000362827 106 ntBASIC0.06□□□□□ -2.4
MMP13P45452 RNU6-1079P-201ENST00000362861 110 ntBASIC0.06□□□□□ -2.4
MMP13P45452 Y_RNA.109-201ENST00000363215 102 ntBASIC0.06□□□□□ -2.4
MMP13P45452 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
MMP13P45452 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.06□□□□□ -2.4
MMP13P45452 SNORD116-16-201ENST00000384533 92 ntBASIC0.05□□□□□ -2.4
MMP13P45452 MIR527-201ENST00000385244 85 ntBASIC0.05□□□□□ -2.4
MMP13P45452 AL445584.3-201ENST00000617173 78 ntBASIC0.05□□□□□ -2.4
MMP13P45452 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
MMP13P45452 AC114755.3-201ENST00000481111 251 ntBASIC0.04□□□□□ -2.4
MMP13P45452 RNA5SP330-201ENST00000517096 96 ntBASIC0.04□□□□□ -2.4
MMP13P45452 snoR1.1-201ENST00000628177 80 ntBASIC0.04□□□□□ -2.4
MMP13P45452 RNU6-940P-201ENST00000363433 104 ntBASIC0.03□□□□□ -2.4
MMP13P45452 RNU6-458P-201ENST00000384179 107 ntBASIC0.03□□□□□ -2.4
MMP13P45452 MIR1197-201ENST00000408818 88 ntBASIC0.03□□□□□ -2.4
MMP13P45452 MIR4280-201ENST00000582178 76 ntBASIC0.03□□□□□ -2.4
MMP13P45452 U6.58-201ENST00000613107 107 ntBASIC0.03□□□□□ -2.4
MMP13P45452 RNU6-1133P-201ENST00000410963 100 ntBASIC0.02□□□□□ -2.41
MMP13P45452 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
MMP13P45452 SNORD1B-201ENST00000363091 84 ntBASIC0.01□□□□□ -2.41
MMP13P45452 RNU6-829P-201ENST00000363700 112 ntBASIC0.01□□□□□ -2.41
MMP13P45452 MIR3938-201ENST00000582157 103 ntBASIC0.01□□□□□ -2.41
MMP13P45452 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
MMP13P45452 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
MMP13P45452 AL590491.3-201ENST00000610731 82 ntBASIC0□□□□□ -2.41
MMP13P45452 RNA5SP457-201ENST00000363657 124 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 RNU6-598P-201ENST00000364017 105 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 SNORD113-4-201ENST00000364802 75 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 AL445193.1-201ENST00000441183 141 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 AC079150.2-201ENST00000443733 78 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 RNU6-499P-201ENST00000365615 107 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 MIR6854-201ENST00000614935 69 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 U2.18-201ENST00000622185 84 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 SNORD38.3-201ENST00000516599 73 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 U7.5-201ENST00000517224 61 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 RNU6-901P-201ENST00000384593 106 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 RNU7-88P-201ENST00000458752 63 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 RNU6-231P-201ENST00000517122 103 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 SNORA62.4-201ENST00000365504 151 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 MIR124-2-201ENST00000385081 109 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
MMP13P45452 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
MMP13P45452 RNU6-172P-201ENST00000411000 93 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 MIR6851-201ENST00000617060 67 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 SNORD114-12-201ENST00000365400 75 ntBASIC-0.08□□□□□ -2.42
MMP13P45452 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
MMP13P45452 SNORA40.16-201ENST00000517238 121 ntBASIC-0.08□□□□□ -2.42
MMP13P45452 RNA5SP169-201ENST00000517268 117 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 MIR2909-201ENST00000617113 69 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 SNORD114-11-201ENST00000363738 75 ntBASIC-0.1□□□□□ -2.43
MMP13P45452 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 MIR579-201ENST00000385221 98 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 SNORD116.2-201ENST00000391251 93 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 SNORA18.1-201ENST00000363418 128 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNU6-810P-201ENST00000364001 107 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNA5SP66-201ENST00000517178 101 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 RNU6-696P-201ENST00000390834 107 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 SNORD57-201ENST00000448188 72 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 MIR7110-201ENST00000612638 86 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 RNA5SP257-201ENST00000363023 116 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 SNORD4A-201ENST00000459174 72 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 RNU7-151P-201ENST00000516930 53 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 MIR4490-201ENST00000582647 84 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms