Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RNU4-54P-201ENST00000516428 129 ntBASIC1.94□□□□□ -2.1
HOXD11P31277 SCARNA11.2-201ENST00000517183 154 ntBASIC1.94□□□□□ -2.1
HOXD11P31277 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HOXD11P31277 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
HOXD11P31277 MIR8081-201ENST00000611533 95 ntBASIC1.93□□□□□ -2.1
HOXD11P31277 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXD11P31277 RNA5SP128-201ENST00000365305 116 ntBASIC1.92□□□□□ -2.1
HOXD11P31277 RPS29P1-201ENST00000465274 159 ntBASIC1.92□□□□□ -2.1
HOXD11P31277 MIR6755-201ENST00000619993 66 ntBASIC1.92□□□□□ -2.1
HOXD11P31277 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 MIR520E-201ENST00000384867 87 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 MIR518A1-201ENST00000385068 85 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 RNU7-55P-201ENST00000459426 62 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 RNU7-129P-201ENST00000516128 62 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 MIR5002-201ENST00000584713 97 ntBASIC1.91□□□□□ -2.1
HOXD11P31277 RNU6-1233P-201ENST00000362922 102 ntBASIC1.9□□□□□ -2.11
HOXD11P31277 SNORD26-201ENST00000384147 75 ntBASIC1.9□□□□□ -2.11
HOXD11P31277 SNORD19-201ENST00000391191 68 ntBASIC1.9□□□□□ -2.11
HOXD11P31277 RNY3P8-201ENST00000411366 126 ntBASIC1.9□□□□□ -2.11
HOXD11P31277 MIR499B-201ENST00000636498 73 ntBASIC1.9□□□□□ -2.11
HOXD11P31277 MIR6086-201ENST00000638065 55 ntBASIC1.89□□□□□ -2.11
HOXD11P31277 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
HOXD11P31277 RNA5SP62-201ENST00000363457 110 ntBASIC1.88□□□□□ -2.11
HOXD11P31277 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
HOXD11P31277 MIR548J-201ENST00000408833 112 ntBASIC1.88□□□□□ -2.11
HOXD11P31277 RNA5SP436-201ENST00000516020 115 ntBASIC1.88□□□□□ -2.11
HOXD11P31277 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
HOXD11P31277 Y_RNA.115-201ENST00000363272 98 ntBASIC1.87□□□□□ -2.11
HOXD11P31277 MIR216A-201ENST00000385063 110 ntBASIC1.87□□□□□ -2.11
HOXD11P31277 MIR124-2-201ENST00000385081 109 ntBASIC1.87□□□□□ -2.11
HOXD11P31277 AC096531.1-201ENST00000419107 107 ntBASIC1.87□□□□□ -2.11
HOXD11P31277 RNA5SP160-201ENST00000364866 120 ntBASIC1.86□□□□□ -2.11
HOXD11P31277 RNA5SP121-201ENST00000516537 101 ntBASIC1.86□□□□□ -2.11
HOXD11P31277 MIR502-201ENST00000606349 86 ntBASIC1.86□□□□□ -2.11
HOXD11P31277 RNA5SP257-201ENST00000363023 116 ntBASIC1.85□□□□□ -2.11
HOXD11P31277 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.85□□□□□ -2.11
HOXD11P31277 SNORD60-201ENST00000383903 83 ntBASIC1.84□□□□□ -2.11
HOXD11P31277 MIR26B-201ENST00000362251 77 ntBASIC1.83□□□□□ -2.12
HOXD11P31277 SNORD115.2-201ENST00000391126 59 ntBASIC1.83□□□□□ -2.12
HOXD11P31277 RNU6-900P-201ENST00000384498 102 ntBASIC1.82□□□□□ -2.12
HOXD11P31277 MIR1273G-201ENST00000577677 100 ntBASIC1.82□□□□□ -2.12
HOXD11P31277 MIR193B-201ENST00000384907 83 ntBASIC1.81□□□□□ -2.12
HOXD11P31277 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
HOXD11P31277 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.81□□□□□ -2.12
HOXD11P31277 AC108740.1-201ENST00000498629 225 ntBASIC1.81□□□□□ -2.12
HOXD11P31277 MIR4421-201ENST00000578133 69 ntBASIC1.81□□□□□ -2.12
HOXD11P31277 RPS29P23-201ENST00000458635 123 ntBASIC1.79□□□□□ -2.12
HOXD11P31277 MIR5704-201ENST00000584029 77 ntBASIC1.79□□□□□ -2.12
HOXD11P31277 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXD11P31277 MIR6854-201ENST00000614935 69 ntBASIC1.78□□□□□ -2.12
HOXD11P31277 AL353770.2-201ENST00000620024 78 ntBASIC1.77□□□□□ -2.13
HOXD11P31277 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
HOXD11P31277 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
HOXD11P31277 SNORA42.1-201ENST00000363515 137 ntBASIC1.75□□□□□ -2.13
HOXD11P31277 VTRNA1-3-201ENST00000365645 89 ntBASIC1.74□□□□□ -2.13
HOXD11P31277 MIR6078-201ENST00000611069 100 ntBASIC1.74□□□□□ -2.13
HOXD11P31277 MIR8068-201ENST00000618032 68 ntBASIC1.74□□□□□ -2.13
HOXD11P31277 RNU6-1091P-201ENST00000363945 107 ntBASIC1.73□□□□□ -2.13
HOXD11P31277 AL590095.2-201ENST00000604136 117 ntBASIC1.73□□□□□ -2.13
HOXD11P31277 Y_RNA.134-201ENST00000363435 105 ntBASIC1.72□□□□□ -2.13
HOXD11P31277 RNA5SP363-201ENST00000365072 115 ntBASIC1.72□□□□□ -2.13
HOXD11P31277 Y_RNA.382-201ENST00000365672 114 ntBASIC1.72□□□□□ -2.13
HOXD11P31277 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.72□□□□□ -2.13
HOXD11P31277 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXD11P31277 RNU6-455P-201ENST00000384681 107 ntBASIC1.71□□□□□ -2.14
HOXD11P31277 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
HOXD11P31277 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HOXD11P31277 RNA5SP330-201ENST00000517096 96 ntBASIC1.7□□□□□ -2.14
HOXD11P31277 MIR4661-201ENST00000582720 75 ntBASIC1.7□□□□□ -2.14
HOXD11P31277 MIR5683-201ENST00000636514 76 ntBASIC1.7□□□□□ -2.14
HOXD11P31277 RNU6-901P-201ENST00000384593 106 ntBASIC1.69□□□□□ -2.14
HOXD11P31277 uc_338.17-201ENST00000619633 179 ntBASIC1.69□□□□□ -2.14
HOXD11P31277 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.69□□□□□ -2.14
HOXD11P31277 MIR924-201ENST00000638017 53 ntBASIC1.68□□□□□ -2.14
HOXD11P31277 RNU6-608P-201ENST00000383927 104 ntBASIC1.67□□□□□ -2.14
HOXD11P31277 AC087343.1-201ENST00000477341 475 ntBASIC1.67□□□□□ -2.14
HOXD11P31277 MIR5000-201ENST00000577717 103 ntBASIC1.67□□□□□ -2.14
HOXD11P31277 Y_RNA.519-201ENST00000384553 102 ntBASIC1.66□□□□□ -2.14
HOXD11P31277 RNU6-863P-201ENST00000515989 104 ntBASIC1.66□□□□□ -2.14
HOXD11P31277 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
HOXD11P31277 AP002795.1-201ENST00000534879 84 ntBASIC1.64□□□□□ -2.15
HOXD11P31277 SNORD114-27-201ENST00000363766 70 ntBASIC1.63□□□□□ -2.15
HOXD11P31277 MIR6767-201ENST00000637302 66 ntBASIC1.63□□□□□ -2.15
HOXD11P31277 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HOXD11P31277 MIR608-201ENST00000384820 100 ntBASIC1.61□□□□□ -2.15
HOXD11P31277 AL353691.2-201ENST00000443795 59 ntBASIC1.61□□□□□ -2.15
HOXD11P31277 RNA5SP67-201ENST00000516422 131 ntBASIC1.61□□□□□ -2.15
HOXD11P31277 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.61□□□□□ -2.15
HOXD11P31277 MIR548N-201ENST00000408742 75 ntBASIC1.6□□□□□ -2.15
HOXD11P31277 SNORA16.1-201ENST00000364597 132 ntBASIC1.59□□□□□ -2.15
HOXD11P31277 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.59□□□□□ -2.15
HOXD11P31277 MIR6514-201ENST00000622549 70 ntBASIC1.59□□□□□ -2.15
HOXD11P31277 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
HOXD11P31277 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.58□□□□□ -2.16
HOXD11P31277 SNORA31.24-201ENST00000517232 57 ntBASIC1.57□□□□□ -2.16
HOXD11P31277 OR2A41P-201ENST00000473586 105 ntBASIC1.56□□□□□ -2.16
HOXD11P31277 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
HOXD11P31277 Y_RNA.129-201ENST00000363392 110 ntBASIC1.55□□□□□ -2.16
HOXD11P31277 RNA5SP331-201ENST00000364986 107 ntBASIC1.55□□□□□ -2.16
HOXD11P31277 RNU6-110P-201ENST00000384508 104 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms