Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP300-201ENST00000391197 107 ntBASIC-0.37□□□□□ -2.47
ERCC3P19447 MIR101-1-201ENST00000362265 75 ntBASIC-0.38□□□□□ -2.47
ERCC3P19447 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.38□□□□□ -2.47
ERCC3P19447 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.38□□□□□ -2.47
ERCC3P19447 RNU6-518P-201ENST00000516056 96 ntBASIC-0.39□□□□□ -2.47
ERCC3P19447 AC108676.2-201ENST00000605225 163 ntBASIC-0.39□□□□□ -2.47
ERCC3P19447 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
ERCC3P19447 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
ERCC3P19447 RNA5SP470-201ENST00000516463 106 ntBASIC-0.4□□□□□ -2.47
ERCC3P19447 MIR4788-201ENST00000639104 80 ntBASIC-0.4□□□□□ -2.47
ERCC3P19447 SNORD56B-201ENST00000384713 71 ntBASIC-0.41□□□□□ -2.48
ERCC3P19447 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
ERCC3P19447 RNA5SP451-201ENST00000410588 110 ntBASIC-0.42□□□□□ -2.48
ERCC3P19447 RNA5SP66-201ENST00000517178 101 ntBASIC-0.42□□□□□ -2.48
ERCC3P19447 MIR8064-201ENST00000612863 90 ntBASIC-0.42□□□□□ -2.48
ERCC3P19447 MIR4662A-201ENST00000637499 67 ntBASIC-0.42□□□□□ -2.48
ERCC3P19447 RNU6-687P-201ENST00000516443 89 ntBASIC-0.43□□□□□ -2.48
ERCC3P19447 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.43□□□□□ -2.48
ERCC3P19447 MIR5704-201ENST00000584029 77 ntBASIC-0.43□□□□□ -2.48
ERCC3P19447 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.44□□□□□ -2.48
ERCC3P19447 AL021921.1-201ENST00000442774 93 ntBASIC-0.44□□□□□ -2.48
ERCC3P19447 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.44□□□□□ -2.48
ERCC3P19447 AL353803.5-201ENST00000599815 141 ntBASIC-0.44□□□□□ -2.48
ERCC3P19447 AL627230.5-201ENST00000619807 58 ntBASIC-0.44□□□□□ -2.48
ERCC3P19447 RNU6-30P-201ENST00000384561 107 ntBASIC-0.45□□□□□ -2.48
ERCC3P19447 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.45□□□□□ -2.48
ERCC3P19447 U2.7-201ENST00000619197 100 ntBASIC-0.45□□□□□ -2.48
ERCC3P19447 SNORD115-31-201ENST00000365318 82 ntBASIC-0.46□□□□□ -2.48
ERCC3P19447 MIR548V-201ENST00000584165 80 ntBASIC-0.46□□□□□ -2.48
ERCC3P19447 SNORD114-11-201ENST00000363738 75 ntBASIC-0.47□□□□□ -2.48
ERCC3P19447 SNORD95.1-201ENST00000364099 68 ntBASIC-0.47□□□□□ -2.48
ERCC3P19447 SNORD115-23-201ENST00000364461 82 ntBASIC-0.47□□□□□ -2.48
ERCC3P19447 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.47□□□□□ -2.48
ERCC3P19447 RPS29P8-201ENST00000445109 171 ntBASIC-0.47□□□□□ -2.48
ERCC3P19447 SNORA32.3-201ENST00000384772 121 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 MIR519A2-201ENST00000384990 87 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 MIR4280-201ENST00000582178 76 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 MIR6854-201ENST00000614935 69 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 AC093726.3-201ENST00000637588 150 ntBASIC-0.48□□□□□ -2.49
ERCC3P19447 RNU6-776P-201ENST00000364403 104 ntBASIC-0.5□□□□□ -2.49
ERCC3P19447 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.5□□□□□ -2.49
ERCC3P19447 SNORD14C-201ENST00000365382 88 ntBASIC-0.5□□□□□ -2.49
ERCC3P19447 MIR548AZ-201ENST00000616567 95 ntBASIC-0.5□□□□□ -2.49
ERCC3P19447 MIR224-201ENST00000384889 81 ntBASIC-0.51□□□□□ -2.49
ERCC3P19447 MIR517B-201ENST00000385102 67 ntBASIC-0.51□□□□□ -2.49
ERCC3P19447 MIR196A2-201ENST00000385189 110 ntBASIC-0.51□□□□□ -2.49
ERCC3P19447 MIR204-201ENST00000385200 110 ntBASIC-0.51□□□□□ -2.49
ERCC3P19447 SNORD126-201ENST00000459475 77 ntBASIC-0.52□□□□□ -2.49
ERCC3P19447 RNU6-871P-201ENST00000516122 100 ntBASIC-0.52□□□□□ -2.49
ERCC3P19447 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
ERCC3P19447 MIR6851-201ENST00000617060 67 ntBASIC-0.52□□□□□ -2.49
ERCC3P19447 SNORA62.4-201ENST00000365504 151 ntBASIC-0.53□□□□□ -2.49
ERCC3P19447 RNU7-154P-201ENST00000516194 62 ntBASIC-0.54□□□□□ -2.5
ERCC3P19447 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 SNORD75.1-201ENST00000408373 60 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 RNU6-634P-201ENST00000459134 106 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 MIR8068-201ENST00000618032 68 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.55□□□□□ -2.5
ERCC3P19447 SNORD30.1-201ENST00000391309 70 ntBASIC-0.57□□□□□ -2.5
ERCC3P19447 AC114755.3-201ENST00000481111 251 ntBASIC-0.57□□□□□ -2.5
ERCC3P19447 RNA5SP67-201ENST00000516422 131 ntBASIC-0.57□□□□□ -2.5
ERCC3P19447 RNA5SP215-201ENST00000363440 122 ntBASIC-0.58□□□□□ -2.5
ERCC3P19447 RNU6-663P-201ENST00000391105 106 ntBASIC-0.58□□□□□ -2.5
ERCC3P19447 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.58□□□□□ -2.5
ERCC3P19447 RNA5SP169-201ENST00000517268 117 ntBASIC-0.58□□□□□ -2.5
ERCC3P19447 MIR630-201ENST00000384957 97 ntBASIC-0.6□□□□□ -2.51
ERCC3P19447 RNU7-174P-201ENST00000516248 59 ntBASIC-0.6□□□□□ -2.51
ERCC3P19447 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.61□□□□□ -2.51
ERCC3P19447 SNORD116-24-201ENST00000384549 92 ntBASIC-0.61□□□□□ -2.51
ERCC3P19447 MIR124-2-201ENST00000385081 109 ntBASIC-0.61□□□□□ -2.51
ERCC3P19447 RNU6-284P-201ENST00000411105 106 ntBASIC-0.61□□□□□ -2.51
ERCC3P19447 RNU6-540P-201ENST00000384622 101 ntBASIC-0.63□□□□□ -2.51
ERCC3P19447 SNORA13-201ENST00000458790 133 ntBASIC-0.64□□□□□ -2.51
ERCC3P19447 RNU6-523P-201ENST00000516304 54 ntBASIC-0.64□□□□□ -2.51
ERCC3P19447 RNU6-638P-201ENST00000516582 104 ntBASIC-0.64□□□□□ -2.51
ERCC3P19447 RNU6-698P-201ENST00000363523 107 ntBASIC-0.65□□□□□ -2.51
ERCC3P19447 RNU6-34P-201ENST00000364874 107 ntBASIC-0.65□□□□□ -2.51
ERCC3P19447 MIR518B-201ENST00000385127 83 ntBASIC-0.65□□□□□ -2.51
ERCC3P19447 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
ERCC3P19447 MIR4464-201ENST00000580818 92 ntBASIC-0.65□□□□□ -2.51
ERCC3P19447 RNU6-649P-201ENST00000384463 107 ntBASIC-0.67□□□□□ -2.52
ERCC3P19447 SNORD113-2-201ENST00000391082 72 ntBASIC-0.67□□□□□ -2.52
ERCC3P19447 RNU6-630P-201ENST00000391258 106 ntBASIC-0.68□□□□□ -2.52
ERCC3P19447 RNU4-63P-201ENST00000411313 118 ntBASIC-0.68□□□□□ -2.52
ERCC3P19447 SNORD18.2-201ENST00000459604 70 ntBASIC-0.68□□□□□ -2.52
ERCC3P19447 SNORD22.1-201ENST00000516331 125 ntBASIC-0.68□□□□□ -2.52
ERCC3P19447 MIR6888-201ENST00000621977 67 ntBASIC-0.68□□□□□ -2.52
ERCC3P19447 SNORD114-14-201ENST00000362723 75 ntBASIC-0.69□□□□□ -2.52
ERCC3P19447 SNORD74.6-201ENST00000364796 70 ntBASIC-0.69□□□□□ -2.52
ERCC3P19447 MIR527-201ENST00000385244 85 ntBASIC-0.69□□□□□ -2.52
ERCC3P19447 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.69□□□□□ -2.52
ERCC3P19447 AL445584.3-201ENST00000617173 78 ntBASIC-0.69□□□□□ -2.52
ERCC3P19447 MIR409-201ENST00000362237 79 ntBASIC-0.7□□□□□ -2.52
ERCC3P19447 SNORA3B-201ENST00000391305 131 ntBASIC-0.7□□□□□ -2.52
ERCC3P19447 AC021146.6-201ENST00000514659 117 ntBASIC-0.7□□□□□ -2.52
ERCC3P19447 MIR3179-1-201ENST00000578940 84 ntBASIC-0.7□□□□□ -2.52
ERCC3P19447 MIR3179-2-201ENST00000579107 84 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms