Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 SNORA62.5-201ENST00000516634 120 ntBASIC0.04□□□□□ -2.4
SPDEFO95238 RNU6-122P-201ENST00000516818 107 ntBASIC0.04□□□□□ -2.4
SPDEFO95238 Y_RNA.282-201ENST00000364793 102 ntBASIC0.03□□□□□ -2.4
SPDEFO95238 SNORA62.4-201ENST00000365504 151 ntBASIC0.02□□□□□ -2.41
SPDEFO95238 SNORA41B-201ENST00000384785 128 ntBASIC0.02□□□□□ -2.41
SPDEFO95238 MIR527-201ENST00000385244 85 ntBASIC0.02□□□□□ -2.41
SPDEFO95238 AC104692.1-201ENST00000472406 90 ntBASIC0.02□□□□□ -2.41
SPDEFO95238 SNORD49B-201ENST00000365172 72 ntBASIC0.01□□□□□ -2.41
SPDEFO95238 SNORD116-16-201ENST00000384533 92 ntBASIC0□□□□□ -2.41
SPDEFO95238 SNORD56B-201ENST00000384713 71 ntBASIC0□□□□□ -2.41
SPDEFO95238 MIR466-201ENST00000580653 84 ntBASIC0□□□□□ -2.41
SPDEFO95238 MIR4464-201ENST00000580818 92 ntBASIC0□□□□□ -2.41
SPDEFO95238 MIR4514-201ENST00000581410 57 ntBASIC0□□□□□ -2.41
SPDEFO95238 RN7SL793P-201ENST00000583259 296 ntBASIC0□□□□□ -2.41
SPDEFO95238 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 RNU6-901P-201ENST00000384593 106 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 MIR5704-201ENST00000584029 77 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 AC108676.2-201ENST00000605225 163 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
SPDEFO95238 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.02□□□□□ -2.41
SPDEFO95238 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.02□□□□□ -2.41
SPDEFO95238 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
SPDEFO95238 MIR6888-201ENST00000621977 67 ntBASIC-0.02□□□□□ -2.41
SPDEFO95238 MIR6718-201ENST00000616153 80 ntBASIC-0.03□□□□□ -2.41
SPDEFO95238 MIR429-201ENST00000362106 83 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 RNU6-458P-201ENST00000384179 107 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 U6.58-201ENST00000613107 107 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 MIR6854-201ENST00000614935 69 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 AL445584.3-201ENST00000617173 78 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
SPDEFO95238 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.05□□□□□ -2.42
SPDEFO95238 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SPDEFO95238 MIR8068-201ENST00000618032 68 ntBASIC-0.05□□□□□ -2.42
SPDEFO95238 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
SPDEFO95238 SNORA18.1-201ENST00000363418 128 ntBASIC-0.06□□□□□ -2.42
SPDEFO95238 RNU6-246P-201ENST00000384702 107 ntBASIC-0.06□□□□□ -2.42
SPDEFO95238 MIR3938-201ENST00000582157 103 ntBASIC-0.06□□□□□ -2.42
SPDEFO95238 MIR4280-201ENST00000582178 76 ntBASIC-0.06□□□□□ -2.42
SPDEFO95238 MIR330-201ENST00000362196 94 ntBASIC-0.07□□□□□ -2.42
SPDEFO95238 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.07□□□□□ -2.42
SPDEFO95238 MIR193B-201ENST00000384907 83 ntBASIC-0.07□□□□□ -2.42
SPDEFO95238 AL445193.1-201ENST00000441183 141 ntBASIC-0.07□□□□□ -2.42
SPDEFO95238 SNORD114-12-201ENST00000365400 75 ntBASIC-0.08□□□□□ -2.42
SPDEFO95238 AC114755.3-201ENST00000481111 251 ntBASIC-0.08□□□□□ -2.42
SPDEFO95238 AL590491.3-201ENST00000610731 82 ntBASIC-0.08□□□□□ -2.42
SPDEFO95238 MIR4263-201ENST00000584745 83 ntBASIC-0.09□□□□□ -2.42
SPDEFO95238 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.1□□□□□ -2.43
SPDEFO95238 RNA5SP66-201ENST00000517178 101 ntBASIC-0.1□□□□□ -2.43
SPDEFO95238 RNU6-499P-201ENST00000365615 107 ntBASIC-0.11□□□□□ -2.43
SPDEFO95238 MIR633-201ENST00000384821 98 ntBASIC-0.11□□□□□ -2.43
SPDEFO95238 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SPDEFO95238 RNA5SP63-201ENST00000391225 112 ntBASIC-0.11□□□□□ -2.43
SPDEFO95238 MIR3666-201ENST00000607845 111 ntBASIC-0.11□□□□□ -2.43
SPDEFO95238 MIR6851-201ENST00000617060 67 ntBASIC-0.11□□□□□ -2.43
SPDEFO95238 SNORD1B-201ENST00000363091 84 ntBASIC-0.12□□□□□ -2.43
SPDEFO95238 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
SPDEFO95238 MIR1273G-201ENST00000577677 100 ntBASIC-0.12□□□□□ -2.43
SPDEFO95238 RNU6-924P-201ENST00000362926 108 ntBASIC-0.13□□□□□ -2.43
SPDEFO95238 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.13□□□□□ -2.43
SPDEFO95238 MIR124-2-201ENST00000385081 109 ntBASIC-0.14□□□□□ -2.43
SPDEFO95238 SNORD38.3-201ENST00000516599 73 ntBASIC-0.14□□□□□ -2.43
SPDEFO95238 RNU6-231P-201ENST00000517122 103 ntBASIC-0.14□□□□□ -2.43
SPDEFO95238 MIR8087-201ENST00000612745 78 ntBASIC-0.14□□□□□ -2.43
SPDEFO95238 AC093726.3-201ENST00000637588 150 ntBASIC-0.14□□□□□ -2.43
SPDEFO95238 RNU6-598P-201ENST00000364017 105 ntBASIC-0.15□□□□□ -2.43
SPDEFO95238 MIR489-201ENST00000384923 84 ntBASIC-0.15□□□□□ -2.43
SPDEFO95238 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.15□□□□□ -2.43
SPDEFO95238 U7.5-201ENST00000517224 61 ntBASIC-0.15□□□□□ -2.43
SPDEFO95238 MIR5190-201ENST00000581537 80 ntBASIC-0.15□□□□□ -2.43
SPDEFO95238 RNU6-696P-201ENST00000390834 107 ntBASIC-0.16□□□□□ -2.44
SPDEFO95238 AC079150.2-201ENST00000443733 78 ntBASIC-0.16□□□□□ -2.44
SPDEFO95238 RNU7-119P-201ENST00000459279 63 ntBASIC-0.16□□□□□ -2.44
SPDEFO95238 RNU6-520P-201ENST00000384717 104 ntBASIC-0.17□□□□□ -2.44
SPDEFO95238 RNU6-172P-201ENST00000411000 93 ntBASIC-0.17□□□□□ -2.44
SPDEFO95238 RNU7-88P-201ENST00000458752 63 ntBASIC-0.17□□□□□ -2.44
SPDEFO95238 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.17□□□□□ -2.44
SPDEFO95238 RNU6-446P-201ENST00000362827 106 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 RNU6-829P-201ENST00000363700 112 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 SNORD74.6-201ENST00000364796 70 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 RNA5SP300-201ENST00000391197 107 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 MIR7110-201ENST00000612638 86 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 MIR4788-201ENST00000639104 80 ntBASIC-0.18□□□□□ -2.44
SPDEFO95238 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.19□□□□□ -2.44
SPDEFO95238 U2.18-201ENST00000622185 84 ntBASIC-0.19□□□□□ -2.44
SPDEFO95238 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
SPDEFO95238 MIR518B-201ENST00000385127 83 ntBASIC-0.21□□□□□ -2.44
SPDEFO95238 SNORD116.2-201ENST00000391251 93 ntBASIC-0.21□□□□□ -2.44
SPDEFO95238 SNORD114-11-201ENST00000363738 75 ntBASIC-0.22□□□□□ -2.44
SPDEFO95238 SNORD57-201ENST00000448188 72 ntBASIC-0.22□□□□□ -2.44
SPDEFO95238 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.22□□□□□ -2.44
SPDEFO95238 SNORA13-201ENST00000458790 133 ntBASIC-0.23□□□□□ -2.45
SPDEFO95238 RNU6-732P-201ENST00000516033 103 ntBASIC-0.23□□□□□ -2.45
SPDEFO95238 SNORD22.1-201ENST00000516331 125 ntBASIC-0.23□□□□□ -2.45
SPDEFO95238 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.23□□□□□ -2.45
SPDEFO95238 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.24□□□□□ -2.45
SPDEFO95238 MIR548AA1-201ENST00000384971 97 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms