Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNU6-988P-201ENST00000519081 107 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 MIR5009-201ENST00000578736 100 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-3.76□□□□□ -3.01
HMGN4O00479 MIR202-201ENST00000362219 110 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 RNU6-1277P-201ENST00000364561 107 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 RNA5SP173-201ENST00000364857 136 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 RNU6-876P-201ENST00000391295 104 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 MTND2P23-201ENST00000422990 651 ntBASIC-3.77□□□□□ -3.01
HMGN4O00479 SNORD58C-201ENST00000365223 64 ntBASIC-3.78□□□□□ -3.01
HMGN4O00479 RNU4-11P-201ENST00000365287 132 ntBASIC-3.78□□□□□ -3.01
HMGN4O00479 RNU6-974P-201ENST00000384099 108 ntBASIC-3.78□□□□□ -3.01
HMGN4O00479 RNU6-649P-201ENST00000384463 107 ntBASIC-3.78□□□□□ -3.01
HMGN4O00479 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.78□□□□□ -3.01
HMGN4O00479 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 RNU6-106P-201ENST00000384405 107 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 RNU6-172P-201ENST00000411000 93 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 RNU6-1108P-201ENST00000516308 104 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 Y_RNA.688-201ENST00000516565 95 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 AP001340.1-201ENST00000624405 217 ntBASIC-3.79□□□□□ -3.02
HMGN4O00479 U6.104-201ENST00000637979 90 ntBASIC-3.8□□□□□ -3.02
HMGN4O00479 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 RNU6-713P-201ENST00000384761 107 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 MIR509-1-201ENST00000385265 94 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 MIR509-2-201ENST00000390724 91 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 RNU6-129P-201ENST00000391022 107 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 SNORA17.4-201ENST00000391287 132 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 MTND4LP1-201ENST00000446263 157 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 AC139792.2-201ENST00000624218 587 ntBASIC-3.81□□□□□ -3.02
HMGN4O00479 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.82□□□□□ -3.02
HMGN4O00479 MIR379-201ENST00000362218 67 ntBASIC-3.83□□□□□ -3.02
HMGN4O00479 RNU6-330P-201ENST00000363015 107 ntBASIC-3.83□□□□□ -3.02
HMGN4O00479 RNU6-182P-201ENST00000516970 105 ntBASIC-3.83□□□□□ -3.02
HMGN4O00479 SNORD45.1-201ENST00000363181 77 ntBASIC-3.84□□□□□ -3.02
HMGN4O00479 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.85□□□□□ -3.03
HMGN4O00479 SNORA8.1-201ENST00000384250 140 ntBASIC-3.85□□□□□ -3.03
HMGN4O00479 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.85□□□□□ -3.03
HMGN4O00479 RNU6-361P-201ENST00000364454 107 ntBASIC-3.86□□□□□ -3.03
HMGN4O00479 RNU6-912P-201ENST00000363800 104 ntBASIC-3.87□□□□□ -3.03
HMGN4O00479 RNU6-828P-201ENST00000364876 107 ntBASIC-3.87□□□□□ -3.03
HMGN4O00479 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 MIR369-201ENST00000362155 70 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 RNU6-668P-201ENST00000364180 107 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 RNU6-987P-201ENST00000384759 104 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 RNU6-971P-201ENST00000516920 106 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 RNA5SP106-201ENST00000517274 100 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 AL731768.1-201ENST00000603124 139 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 U7.2-201ENST00000607576 63 ntBASIC-3.88□□□□□ -3.03
HMGN4O00479 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.89□□□□□ -3.03
HMGN4O00479 SNORD58.1-201ENST00000391313 66 ntBASIC-3.89□□□□□ -3.03
HMGN4O00479 SCARNA23-201ENST00000516060 130 ntBASIC-3.89□□□□□ -3.03
HMGN4O00479 RNU7-160P-201ENST00000516660 62 ntBASIC-3.89□□□□□ -3.03
HMGN4O00479 SNORD42.2-201ENST00000365570 69 ntBASIC-3.9□□□□□ -3.03
HMGN4O00479 MIR519C-201ENST00000385053 87 ntBASIC-3.9□□□□□ -3.03
HMGN4O00479 RNU6-303P-201ENST00000517091 106 ntBASIC-3.9□□□□□ -3.03
HMGN4O00479 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.91□□□□□ -3.04
HMGN4O00479 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.91□□□□□ -3.04
HMGN4O00479 RNU6-530P-201ENST00000391180 107 ntBASIC-3.91□□□□□ -3.04
HMGN4O00479 SNORA81.3-201ENST00000517283 198 ntBASIC-3.91□□□□□ -3.04
HMGN4O00479 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.92□□□□□ -3.04
HMGN4O00479 RNU6-1227P-201ENST00000383981 107 ntBASIC-3.93□□□□□ -3.04
HMGN4O00479 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.93□□□□□ -3.04
HMGN4O00479 Y_RNA.69-201ENST00000362885 109 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 RNY3P1-201ENST00000365085 102 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 RNY4P10-201ENST00000365571 96 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 MIR548AJ2-201ENST00000408539 92 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 RNU6-1135P-201ENST00000411083 103 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 MIR4680-201ENST00000580906 66 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 MIR8062-201ENST00000621515 85 ntBASIC-3.94□□□□□ -3.04
HMGN4O00479 Y_RNA.129-201ENST00000363392 110 ntBASIC-3.95□□□□□ -3.04
HMGN4O00479 RNU6-624P-201ENST00000363411 107 ntBASIC-3.95□□□□□ -3.04
HMGN4O00479 RNU6-68P-201ENST00000516576 104 ntBASIC-3.95□□□□□ -3.04
HMGN4O00479 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.96□□□□□ -3.04
HMGN4O00479 AC074348.1-201ENST00000426503 132 ntBASIC-3.96□□□□□ -3.04
HMGN4O00479 RNU6-574P-201ENST00000384265 107 ntBASIC-3.97□□□□□ -3.04
HMGN4O00479 SNORA33.2-201ENST00000365413 134 ntBASIC-3.98□□□□□ -3.05
HMGN4O00479 SNORD115-37-201ENST00000363768 82 ntBASIC-3.99□□□□□ -3.05
HMGN4O00479 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-4□□□□□ -3.05
HMGN4O00479 Y_RNA.649-201ENST00000459077 103 ntBASIC-4□□□□□ -3.05
HMGN4O00479 Y_RNA.657-201ENST00000515983 102 ntBASIC-4□□□□□ -3.05
HMGN4O00479 RNU6-904P-201ENST00000516206 101 ntBASIC-4□□□□□ -3.05
HMGN4O00479 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.01□□□□□ -3.05
HMGN4O00479 RNU4-71P-201ENST00000516258 113 ntBASIC-4.01□□□□□ -3.05
HMGN4O00479 AC022559.1-201ENST00000520905 205 ntBASIC-4.01□□□□□ -3.05
HMGN4O00479 SNORD114-13-201ENST00000364377 74 ntBASIC-4.02□□□□□ -3.05
HMGN4O00479 RNU6-554P-201ENST00000410466 106 ntBASIC-4.02□□□□□ -3.05
HMGN4O00479 RNU6-557P-201ENST00000516842 110 ntBASIC-4.02□□□□□ -3.05
HMGN4O00479 AC141273.2-201ENST00000618989 130 ntBASIC-4.02□□□□□ -3.05
HMGN4O00479 SNORD113.1-201ENST00000363280 73 ntBASIC-4.03□□□□□ -3.05
HMGN4O00479 RNU7-61P-201ENST00000515897 61 ntBASIC-4.03□□□□□ -3.05
HMGN4O00479 MIR8053-201ENST00000613344 75 ntBASIC-4.03□□□□□ -3.05
HMGN4O00479 AL157777.2-201ENST00000258070 137 ntBASIC-4.04□□□□□ -3.06
HMGN4O00479 Y_RNA.272-201ENST00000364696 102 ntBASIC-4.04□□□□□ -3.06
HMGN4O00479 Y_RNA.459-201ENST00000384251 102 ntBASIC-4.04□□□□□ -3.06
HMGN4O00479 MIR1254-1-201ENST00000408257 97 ntBASIC-4.04□□□□□ -3.06
HMGN4O00479 Y_RNA.20-201ENST00000362479 113 ntBASIC-4.05□□□□□ -3.06
HMGN4O00479 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.05□□□□□ -3.06
HMGN4O00479 RNU6-176P-201ENST00000517196 105 ntBASIC-4.05□□□□□ -3.06
HMGN4O00479 MIR4760-201ENST00000585040 80 ntBASIC-4.05□□□□□ -3.06
HMGN4O00479 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-4.05□□□□□ -3.06
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms