Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 Y_RNA.9-201ENST00000362354 101 ntBASIC-3.95□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.95□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.321-201ENST00000365149 102 ntBASIC-3.95□□□□□ -3.04
AP4S1Q9Y587 MIR1252-201ENST00000408861 65 ntBASIC-3.95□□□□□ -3.04
AP4S1Q9Y587 MIR4777-201ENST00000583710 86 ntBASIC-3.95□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.139-201ENST00000363464 102 ntBASIC-3.96□□□□□ -3.04
AP4S1Q9Y587 RNU6-450P-201ENST00000364654 107 ntBASIC-3.96□□□□□ -3.04
AP4S1Q9Y587 RNU6-530P-201ENST00000391180 107 ntBASIC-3.96□□□□□ -3.04
AP4S1Q9Y587 RNU6-506P-201ENST00000516553 94 ntBASIC-3.96□□□□□ -3.04
AP4S1Q9Y587 RNU6-971P-201ENST00000516920 106 ntBASIC-3.96□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.79-201ENST00000362992 113 ntBASIC-3.97□□□□□ -3.04
AP4S1Q9Y587 RNU6-828P-201ENST00000364876 107 ntBASIC-3.97□□□□□ -3.04
AP4S1Q9Y587 RNU6-823P-201ENST00000391042 103 ntBASIC-3.97□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.645-201ENST00000391229 102 ntBASIC-3.97□□□□□ -3.04
AP4S1Q9Y587 AL731768.1-201ENST00000603124 139 ntBASIC-3.97□□□□□ -3.04
AP4S1Q9Y587 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.98□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.573-201ENST00000384763 105 ntBASIC-3.98□□□□□ -3.05
AP4S1Q9Y587 SNORD127-201ENST00000458892 86 ntBASIC-3.98□□□□□ -3.05
AP4S1Q9Y587 MTND1P19-201ENST00000511780 315 ntBASIC-3.98□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 RNU6-803P-201ENST00000516034 102 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 AC113139.1-201ENST00000605049 239 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 MIR3658-201ENST00000636291 56 ntBASIC-3.99□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.134-201ENST00000363435 105 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.233-201ENST00000364407 101 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.292-201ENST00000364904 97 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 SNORD77.2-201ENST00000391045 68 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 SNORA17.4-201ENST00000391287 132 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 RNU7-153P-201ENST00000516455 62 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 RNU6-68P-201ENST00000516576 104 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 MIR4643-201ENST00000577473 78 ntBASIC-4□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.187-201ENST00000363918 113 ntBASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.309-201ENST00000365046 111 ntBASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 MIR1236-201ENST00000408340 102 ntBASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 RNU6-172P-201ENST00000411000 93 ntBASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.830-201ENST00000628531 96 ntBASIC-4.01□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.237-201ENST00000364439 102 ntBASIC-4.02□□□□□ -3.05
AP4S1Q9Y587 RNU4-11P-201ENST00000365287 132 ntBASIC-4.02□□□□□ -3.05
AP4S1Q9Y587 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.02□□□□□ -3.05
AP4S1Q9Y587 SNORD58A-201ENST00000383875 65 ntBASIC-4.03□□□□□ -3.05
AP4S1Q9Y587 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.03□□□□□ -3.05
AP4S1Q9Y587 RNU7-152P-201ENST00000458982 64 ntBASIC-4.03□□□□□ -3.05
AP4S1Q9Y587 RNU6-781P-201ENST00000516377 101 ntBASIC-4.03□□□□□ -3.05
AP4S1Q9Y587 AC130289.1-201ENST00000577321 73 ntBASIC-4.03□□□□□ -3.05
AP4S1Q9Y587 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 MIR379-201ENST00000362218 67 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 RNY3P14-201ENST00000384309 102 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 RNU6-604P-201ENST00000390917 100 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 SNORD37.2-201ENST00000391075 66 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 RNY4P18-201ENST00000391107 89 ntBASIC-4.04□□□□□ -3.06
AP4S1Q9Y587 RNU6-639P-201ENST00000384074 107 ntBASIC-4.05□□□□□ -3.06
AP4S1Q9Y587 RNU6-330P-201ENST00000363015 107 ntBASIC-4.06□□□□□ -3.06
AP4S1Q9Y587 RNU6-361P-201ENST00000364454 107 ntBASIC-4.06□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.505-201ENST00000384489 102 ntBASIC-4.06□□□□□ -3.06
AP4S1Q9Y587 MIR1254-1-201ENST00000408257 97 ntBASIC-4.06□□□□□ -3.06
AP4S1Q9Y587 RNU6-795P-201ENST00000516323 103 ntBASIC-4.06□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.483-201ENST00000384380 101 ntBASIC-4.07□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.276-201ENST00000364732 109 ntBASIC-4.08□□□□□ -3.06
AP4S1Q9Y587 AL035470.1-201ENST00000622571 220 ntBASIC-4.08□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.29-201ENST00000362570 113 ntBASIC-4.09□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.609-201ENST00000410669 89 ntBASIC-4.09□□□□□ -3.06
AP4S1Q9Y587 MIR3675-201ENST00000583661 73 ntBASIC-4.09□□□□□ -3.06
AP4S1Q9Y587 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.1□□□□□ -3.07
AP4S1Q9Y587 MIR3688-2-201ENST00000636963 87 ntBASIC-4.1□□□□□ -3.07
AP4S1Q9Y587 MIR369-201ENST00000362155 70 ntBASIC-4.11□□□□□ -3.07
AP4S1Q9Y587 RNA5SP215-201ENST00000363440 122 ntBASIC-4.11□□□□□ -3.07
AP4S1Q9Y587 MIR1302-6-201ENST00000408466 90 ntBASIC-4.11□□□□□ -3.07
AP4S1Q9Y587 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.11□□□□□ -3.07
AP4S1Q9Y587 RNU6-915P-201ENST00000364943 103 ntBASIC-4.12□□□□□ -3.07
AP4S1Q9Y587 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-4.12□□□□□ -3.07
AP4S1Q9Y587 RNU6-1143P-201ENST00000516125 104 ntBASIC-4.12□□□□□ -3.07
AP4S1Q9Y587 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-4.12□□□□□ -3.07
AP4S1Q9Y587 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-4.13□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.210-201ENST00000364161 110 ntBASIC-4.14□□□□□ -3.07
AP4S1Q9Y587 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.14□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.264-201ENST00000364665 102 ntBASIC-4.14□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.387-201ENST00000383918 102 ntBASIC-4.14□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.69-201ENST00000362885 109 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 SNORD45.1-201ENST00000363181 77 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.266-201ENST00000364678 96 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 RNU6-460P-201ENST00000391158 108 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 RNU6-972P-201ENST00000391208 107 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 RNU7-121P-201ENST00000516604 62 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 Y_RNA.705-201ENST00000516862 110 ntBASIC-4.15□□□□□ -3.07
AP4S1Q9Y587 DNAJC19P2-201ENST00000593340 302 ntBASIC-4.16□□□□□ -3.08
AP4S1Q9Y587 SNORA8.1-201ENST00000384250 140 ntBASIC-4.17□□□□□ -3.08
AP4S1Q9Y587 RNU6-887P-201ENST00000410660 100 ntBASIC-4.17□□□□□ -3.08
AP4S1Q9Y587 RNU2-16P-201ENST00000410712 136 ntBASIC-4.17□□□□□ -3.08
AP4S1Q9Y587 RNU7-197P-201ENST00000458836 62 ntBASIC-4.17□□□□□ -3.08
AP4S1Q9Y587 RNU6-537P-201ENST00000517277 103 ntBASIC-4.17□□□□□ -3.08
AP4S1Q9Y587 RNA5SP173-201ENST00000364857 136 ntBASIC-4.18□□□□□ -3.08
AP4S1Q9Y587 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.18□□□□□ -3.08
AP4S1Q9Y587 RNU6-239P-201ENST00000390990 99 ntBASIC-4.18□□□□□ -3.08
AP4S1Q9Y587 MIR513C-201ENST00000401352 84 ntBASIC-4.18□□□□□ -3.08
AP4S1Q9Y587 Y_RNA.612-201ENST00000410717 95 ntBASIC-4.18□□□□□ -3.08
AP4S1Q9Y587 RNU7-160P-201ENST00000516660 62 ntBASIC-4.18□□□□□ -3.08
Retrieved 100 of 98,524 protein–RNA pairs in 8531.7 ms