Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 MTND4LP9-201ENST00000427694 174 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 MIR548X2-201ENST00000579776 100 ntBASIC-1.32□□□□□ -2.62
PCDH15Q96QU1 AL021921.1-201ENST00000442774 93 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 SNORD33.1-201ENST00000516213 88 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 MIR3675-201ENST00000583661 73 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 AL035470.1-201ENST00000622571 220 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 MIR664B-201ENST00000626756 61 ntBASIC-1.33□□□□□ -2.62
PCDH15Q96QU1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 MIR519C-201ENST00000385053 87 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 AC103810.7-201ENST00000607821 91 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 MIR507-201ENST00000385234 94 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 AC091912.2-201ENST00000624798 167 ntBASIC-1.34□□□□□ -2.62
PCDH15Q96QU1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 RNU6-574P-201ENST00000384265 107 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 AL078595.1-201ENST00000404458 226 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 RNU6-394P-201ENST00000410735 107 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 AC104996.3-201ENST00000590718 94 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 AC004792.1-201ENST00000614523 137 ntBASIC-1.35□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 RNU6-813P-201ENST00000384691 107 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 MIR548A3-201ENST00000385297 97 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 U4.4-201ENST00000620626 117 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.36□□□□□ -2.63
PCDH15Q96QU1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.37□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 AC108019.1-201ENST00000512540 175 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 SNORD19-201ENST00000391191 68 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 SNORD54-201ENST00000459159 67 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 MTND5P41-201ENST00000517498 206 ntBASIC-1.38□□□□□ -2.63
PCDH15Q96QU1 RNU6-196P-201ENST00000384315 107 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 MIR1236-201ENST00000408340 102 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 SCARNA23-201ENST00000516060 130 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 RNU6-795P-201ENST00000516323 103 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 RNU6-980P-201ENST00000516925 103 ntBASIC-1.39□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.4□□□□□ -2.63
PCDH15Q96QU1 RNU6-200P-201ENST00000364743 107 ntBASIC-1.4□□□□□ -2.63
PCDH15Q96QU1 SNORA40-201ENST00000388090 126 ntBASIC-1.4□□□□□ -2.63
PCDH15Q96QU1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
PCDH15Q96QU1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.4□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.41□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.41□□□□□ -2.63
PCDH15Q96QU1 MIR548Q-201ENST00000408404 100 ntBASIC-1.41□□□□□ -2.63
PCDH15Q96QU1 MIR4756-201ENST00000577874 78 ntBASIC-1.41□□□□□ -2.63
PCDH15Q96QU1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.41□□□□□ -2.64
PCDH15Q96QU1 MIR487B-201ENST00000385021 84 ntBASIC-1.42□□□□□ -2.64
PCDH15Q96QU1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.42□□□□□ -2.64
PCDH15Q96QU1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.43□□□□□ -2.64
PCDH15Q96QU1 MIR3139-201ENST00000579145 76 ntBASIC-1.43□□□□□ -2.64
PCDH15Q96QU1 AC005520.4-201ENST00000604337 90 ntBASIC-1.43□□□□□ -2.64
PCDH15Q96QU1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 AC120024.2-201ENST00000576526 175 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 AP001094.1-201ENST00000579805 193 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 U6.81-201ENST00000612550 106 ntBASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.44□□□□□ -2.64
PCDH15Q96QU1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 RNU6-630P-201ENST00000391258 106 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 RNU7-107P-201ENST00000459121 61 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 MIR6874-201ENST00000635894 71 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 MIR2052-201ENST00000636055 55 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 RNA5SP405-201ENST00000363059 114 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 RNU6-257P-201ENST00000410238 98 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.45□□□□□ -2.64
PCDH15Q96QU1 AC012531.4-201ENST00000616509 177 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms