Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 U2.7-201ENST00000619197 100 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU6-643P-201ENST00000384018 107 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU6-409P-201ENST00000384114 104 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU6-616P-201ENST00000384353 107 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU6-578P-201ENST00000390980 103 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 MIR1302-6-201ENST00000408466 90 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU2-38P-201ENST00000410856 79 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.18□□□□□ -2.6
TTC28Q96AY4 RNU6-340P-201ENST00000364005 107 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 SNORD18B-201ENST00000365659 72 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 RNU6-211P-201ENST00000384047 107 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 MIR1302-11-201ENST00000408051 138 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 MIR1302-9-201ENST00000408365 138 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 MIR1302-10-201ENST00000408734 138 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 MIR1302-2-201ENST00000607096 138 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 AL160413.1-201ENST00000622780 310 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 MIR3688-2-201ENST00000636963 87 ntBASIC-1.19□□□□□ -2.6
TTC28Q96AY4 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 RNA5SP224-201ENST00000365069 126 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 RNU2-16P-201ENST00000410712 136 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 RNU5F-1-201ENST00000362507 117 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 RNU6-770P-201ENST00000363929 105 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 MIR577-201ENST00000385196 96 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 RNU6-493P-201ENST00000391321 108 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 MTND3P22-201ENST00000510932 243 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 SNORA18.5-201ENST00000516616 101 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 AL132765.2-201ENST00000610812 351 ntBASIC-1.2□□□□□ -2.6
TTC28Q96AY4 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-681P-201ENST00000364012 104 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-381P-201ENST00000391259 108 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 SNORD1B-201ENST00000363091 84 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-379P-201ENST00000363813 104 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 Y_RNA.194-201ENST00000363985 102 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 MIR548C-201ENST00000384815 97 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.21□□□□□ -2.6
TTC28Q96AY4 RNU6-460P-201ENST00000391158 108 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 RNU6-995P-201ENST00000391244 107 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 SNORA40.15-201ENST00000516884 107 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 SNORD116-2-201ENST00000384274 95 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 RNU6-768P-201ENST00000384683 107 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 RNU7-61P-201ENST00000515897 61 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.22□□□□□ -2.6
TTC28Q96AY4 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 SNORD113-2-201ENST00000391082 72 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 RNU7-174P-201ENST00000516248 59 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 SNORD90-201ENST00000391145 111 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 RNU6-718P-201ENST00000516166 105 ntBASIC-1.23□□□□□ -2.61
TTC28Q96AY4 MIR3163-201ENST00000581592 73 ntBASIC-1.24□□□□□ -2.61
TTC28Q96AY4 SNORA7.5-201ENST00000410672 110 ntBASIC-1.24□□□□□ -2.61
TTC28Q96AY4 RNU6-752P-201ENST00000516376 102 ntBASIC-1.24□□□□□ -2.61
TTC28Q96AY4 U4.5-201ENST00000617137 123 ntBASIC-1.24□□□□□ -2.61
TTC28Q96AY4 SNORA24B-201ENST00000384176 131 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 SNORD115.2-201ENST00000391126 59 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 MIR3149-201ENST00000584629 83 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 MIR4760-201ENST00000585040 80 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 AC090971.5-201ENST00000621102 293 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 SNORA41B-201ENST00000384785 128 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 RNU6-823P-201ENST00000391042 103 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.25□□□□□ -2.61
TTC28Q96AY4 RNU6-698P-201ENST00000363523 107 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 RNU6-34P-201ENST00000364874 107 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 RNU6-1024P-201ENST00000384199 107 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 MIR1252-201ENST00000408861 65 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 RNA5SP136-201ENST00000410906 107 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 RNU6-624P-201ENST00000363411 107 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 MIR1277-201ENST00000408536 78 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 RNU6-518P-201ENST00000516056 96 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.26□□□□□ -2.61
TTC28Q96AY4 MIR202-201ENST00000362219 110 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 SNORD113-1-201ENST00000365321 69 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 MTND5P22-201ENST00000458380 195 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 RNU6-326P-201ENST00000365480 107 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 RNU6-554P-201ENST00000410466 106 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.27□□□□□ -2.61
TTC28Q96AY4 SNORD127-201ENST00000458892 86 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.27□□□□□ -2.61
TTC28Q96AY4 MIR23C-201ENST00000579846 100 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 MIR6844-201ENST00000637122 62 ntBASIC-1.27□□□□□ -2.61
TTC28Q96AY4 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 204.6 ms