Protein–RNA interactions for Protein: Q8TDD1

DDX54, ATP-dependent RNA helicase DDX54, humanhuman

Known RBP Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54Q8TDD1 AC244090.1-201ENST00000441884 93 ntBASIC0.72□□□□□ -2.29
DDX54Q8TDD1 RNU6-542P-201ENST00000516405 103 ntBASIC0.72□□□□□ -2.29
DDX54Q8TDD1 RNU6-175P-201ENST00000516896 107 ntBASIC0.72□□□□□ -2.29
DDX54Q8TDD1 RNA5SP128-201ENST00000365305 116 ntBASIC0.71□□□□□ -2.3
DDX54Q8TDD1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.71□□□□□ -2.3
DDX54Q8TDD1 MIR3925-201ENST00000584674 77 ntBASIC0.71□□□□□ -2.3
DDX54Q8TDD1 U7.6-201ENST00000610841 64 ntBASIC0.71□□□□□ -2.3
DDX54Q8TDD1 AC084368.1-201ENST00000620935 65 ntBASIC0.71□□□□□ -2.3
DDX54Q8TDD1 SNORD114-29-201ENST00000364819 70 ntBASIC0.7□□□□□ -2.3
DDX54Q8TDD1 SNORA49-201ENST00000386157 136 ntBASIC0.7□□□□□ -2.3
DDX54Q8TDD1 MIR548AD-201ENST00000584780 82 ntBASIC0.7□□□□□ -2.3
DDX54Q8TDD1 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
DDX54Q8TDD1 RN7SL660P-201ENST00000614852 299 ntBASIC0.7□□□□□ -2.3
DDX54Q8TDD1 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
DDX54Q8TDD1 CYP3A54P-201ENST00000566950 75 ntBASIC0.68□□□□□ -2.3
DDX54Q8TDD1 RNA5SP215-201ENST00000363440 122 ntBASIC0.67□□□□□ -2.3
DDX54Q8TDD1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.67□□□□□ -2.3
DDX54Q8TDD1 AC110620.1-201ENST00000416042 228 ntBASIC0.67□□□□□ -2.3
DDX54Q8TDD1 SCARNA21.1-201ENST00000515996 128 ntBASIC0.67□□□□□ -2.3
DDX54Q8TDD1 RNA5SP192-201ENST00000364404 120 ntBASIC0.66□□□□□ -2.3
DDX54Q8TDD1 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
DDX54Q8TDD1 SNORA75.1-201ENST00000391130 148 ntBASIC0.66□□□□□ -2.3
DDX54Q8TDD1 AC114737.2-201ENST00000421583 173 ntBASIC0.66□□□□□ -2.3
DDX54Q8TDD1 RNU7-174P-201ENST00000516248 59 ntBASIC0.66□□□□□ -2.3
DDX54Q8TDD1 MIR517B-201ENST00000385102 67 ntBASIC0.64□□□□□ -2.31
DDX54Q8TDD1 RNU6-337P-201ENST00000391243 106 ntBASIC0.64□□□□□ -2.31
DDX54Q8TDD1 MIR2909-201ENST00000617113 69 ntBASIC0.64□□□□□ -2.31
DDX54Q8TDD1 SNORA25.5-201ENST00000363782 126 ntBASIC0.63□□□□□ -2.31
DDX54Q8TDD1 RNU6-815P-201ENST00000384080 113 ntBASIC0.63□□□□□ -2.31
DDX54Q8TDD1 MIR1255B2-201ENST00000408618 67 ntBASIC0.63□□□□□ -2.31
DDX54Q8TDD1 U4.4-201ENST00000620626 117 ntBASIC0.63□□□□□ -2.31
DDX54Q8TDD1 MIRLET7D-201ENST00000362263 87 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-1246P-201ENST00000391064 107 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-848P-201ENST00000515948 107 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-617P-201ENST00000516147 107 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-473P-201ENST00000516164 107 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 SCARNA11.2-201ENST00000517183 154 ntBASIC0.62□□□□□ -2.31
DDX54Q8TDD1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
DDX54Q8TDD1 MIR6773-201ENST00000612812 74 ntBASIC0.61□□□□□ -2.31
DDX54Q8TDD1 MIR6086-201ENST00000638065 55 ntBASIC0.61□□□□□ -2.31
DDX54Q8TDD1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
DDX54Q8TDD1 RNU6-127P-201ENST00000390897 107 ntBASIC0.6□□□□□ -2.31
DDX54Q8TDD1 MIR4514-201ENST00000581410 57 ntBASIC0.6□□□□□ -2.31
DDX54Q8TDD1 SNORA9.1-201ENST00000362412 131 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 RNU6-698P-201ENST00000363523 107 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 RNU6-34P-201ENST00000364874 107 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 MIR633-201ENST00000384821 98 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 MIR643-201ENST00000385267 97 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 RNU6-518P-201ENST00000516056 96 ntBASIC0.59□□□□□ -2.31
DDX54Q8TDD1 Y_RNA.325-201ENST00000365171 122 ntBASIC0.58□□□□□ -2.32
DDX54Q8TDD1 RNU6-302P-201ENST00000365249 107 ntBASIC0.58□□□□□ -2.32
DDX54Q8TDD1 MIR876-201ENST00000401147 81 ntBASIC0.57□□□□□ -2.32
DDX54Q8TDD1 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
DDX54Q8TDD1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
DDX54Q8TDD1 MIR519A2-201ENST00000384990 87 ntBASIC0.56□□□□□ -2.32
DDX54Q8TDD1 AP000676.1-201ENST00000533307 52 ntBASIC0.56□□□□□ -2.32
DDX54Q8TDD1 MIR466-201ENST00000580653 84 ntBASIC0.56□□□□□ -2.32
DDX54Q8TDD1 RNU6-92P-201ENST00000605893 104 ntBASIC0.56□□□□□ -2.32
DDX54Q8TDD1 RNU6-502P-201ENST00000362419 108 ntBASIC0.55□□□□□ -2.32
DDX54Q8TDD1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.55□□□□□ -2.32
DDX54Q8TDD1 MIR106A-201ENST00000384870 81 ntBASIC0.55□□□□□ -2.32
DDX54Q8TDD1 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
DDX54Q8TDD1 RNU6-782P-201ENST00000516852 104 ntBASIC0.55□□□□□ -2.32
DDX54Q8TDD1 SNORD60.1-201ENST00000362451 73 ntBASIC0.54□□□□□ -2.32
DDX54Q8TDD1 RNU6-669P-201ENST00000365575 107 ntBASIC0.54□□□□□ -2.32
DDX54Q8TDD1 SNORD113-2-201ENST00000391082 72 ntBASIC0.54□□□□□ -2.32
DDX54Q8TDD1 RNA5SP285-201ENST00000516619 119 ntBASIC0.54□□□□□ -2.32
DDX54Q8TDD1 MIR548AG1-201ENST00000579932 66 ntBASIC0.54□□□□□ -2.32
DDX54Q8TDD1 SNORD115-25-201ENST00000362619 82 ntBASIC0.53□□□□□ -2.32
DDX54Q8TDD1 SNORD2-201ENST00000459163 69 ntBASIC0.53□□□□□ -2.32
DDX54Q8TDD1 RNU6-1079P-201ENST00000362861 110 ntBASIC0.52□□□□□ -2.33
DDX54Q8TDD1 MIRLET7B-201ENST00000385140 83 ntBASIC0.52□□□□□ -2.33
DDX54Q8TDD1 AL021921.1-201ENST00000442774 93 ntBASIC0.52□□□□□ -2.33
DDX54Q8TDD1 RNU6-499P-201ENST00000365615 107 ntBASIC0.51□□□□□ -2.33
DDX54Q8TDD1 SNORA41B-201ENST00000384785 128 ntBASIC0.5□□□□□ -2.33
DDX54Q8TDD1 RNA5SP63-201ENST00000391225 112 ntBASIC0.5□□□□□ -2.33
DDX54Q8TDD1 AC069113.3-201ENST00000521019 150 ntBASIC0.5□□□□□ -2.33
DDX54Q8TDD1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
DDX54Q8TDD1 RNU6-940P-201ENST00000363433 104 ntBASIC0.49□□□□□ -2.33
DDX54Q8TDD1 RNU6-122P-201ENST00000516818 107 ntBASIC0.48□□□□□ -2.33
DDX54Q8TDD1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
DDX54Q8TDD1 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
DDX54Q8TDD1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.46□□□□□ -2.34
DDX54Q8TDD1 MIR548H2-201ENST00000408874 88 ntBASIC0.46□□□□□ -2.34
DDX54Q8TDD1 AC108740.1-201ENST00000498629 225 ntBASIC0.46□□□□□ -2.34
DDX54Q8TDD1 AC023932.2-201ENST00000603176 175 ntBASIC0.46□□□□□ -2.34
DDX54Q8TDD1 MIR6514-201ENST00000622549 70 ntBASIC0.46□□□□□ -2.34
DDX54Q8TDD1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.44□□□□□ -2.34
DDX54Q8TDD1 uc_338.36-201ENST00000622331 158 ntBASIC0.44□□□□□ -2.34
DDX54Q8TDD1 RNU6-829P-201ENST00000363700 112 ntBASIC0.43□□□□□ -2.34
DDX54Q8TDD1 RNA5SP163-201ENST00000410304 99 ntBASIC0.43□□□□□ -2.34
DDX54Q8TDD1 Y_RNA.74-201ENST00000362911 99 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 RNA5SP98-201ENST00000363158 137 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 MIR527-201ENST00000385244 85 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 MTND4LP19-201ENST00000403051 166 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 AC079150.2-201ENST00000443733 78 ntBASIC0.42□□□□□ -2.34
DDX54Q8TDD1 MIR593-201ENST00000384856 100 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 226 ms