Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 MIR150-201ENST00000385048 84 ntBASIC2□□□□□ -2.09
SAMD1Q6SPF0 MIR1276-201ENST00000408707 83 ntBASIC2□□□□□ -2.09
SAMD1Q6SPF0 SNORD57-201ENST00000448188 72 ntBASIC2□□□□□ -2.09
SAMD1Q6SPF0 MIR6504-201ENST00000613520 61 ntBASIC2□□□□□ -2.09
SAMD1Q6SPF0 SNORA67.5-201ENST00000391036 107 ntBASIC1.99□□□□□ -2.09
SAMD1Q6SPF0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.99□□□□□ -2.09
SAMD1Q6SPF0 MIR4677-201ENST00000584153 80 ntBASIC1.99□□□□□ -2.09
SAMD1Q6SPF0 SNORD115-23-201ENST00000364461 82 ntBASIC1.98□□□□□ -2.09
SAMD1Q6SPF0 RNU6-42P-201ENST00000384165 107 ntBASIC1.98□□□□□ -2.09
SAMD1Q6SPF0 RNU7-95P-201ENST00000459222 64 ntBASIC1.98□□□□□ -2.09
SAMD1Q6SPF0 RNA5SP404-201ENST00000517118 132 ntBASIC1.98□□□□□ -2.09
SAMD1Q6SPF0 snoR1.1-201ENST00000628177 80 ntBASIC1.98□□□□□ -2.09
SAMD1Q6SPF0 Y_RNA.327-201ENST00000365201 102 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 RNU6-939P-201ENST00000384634 107 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 ACA64.5-201ENST00000516207 127 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 SNORD63.2-201ENST00000516303 64 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 AP000676.1-201ENST00000533307 52 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 AC138207.3-201ENST00000585289 166 ntBASIC1.97□□□□□ -2.09
SAMD1Q6SPF0 SNORD63.1-201ENST00000516178 80 ntBASIC1.96□□□□□ -2.1
SAMD1Q6SPF0 MIR6734-201ENST00000621166 68 ntBASIC1.96□□□□□ -2.1
SAMD1Q6SPF0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SAMD1Q6SPF0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.95□□□□□ -2.1
SAMD1Q6SPF0 RN7SL660P-201ENST00000614852 299 ntBASIC1.95□□□□□ -2.1
SAMD1Q6SPF0 RNU6-59P-201ENST00000384787 107 ntBASIC1.94□□□□□ -2.1
SAMD1Q6SPF0 RNU1-124P-201ENST00000363861 145 ntBASIC1.93□□□□□ -2.1
SAMD1Q6SPF0 MIR501-201ENST00000390204 84 ntBASIC1.93□□□□□ -2.1
SAMD1Q6SPF0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SAMD1Q6SPF0 RNU6-530P-201ENST00000391180 107 ntBASIC1.93□□□□□ -2.1
SAMD1Q6SPF0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.93□□□□□ -2.1
SAMD1Q6SPF0 RNA5SP325-201ENST00000363756 130 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 RNU6-392P-201ENST00000364926 101 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 RNA5SP220-201ENST00000516298 104 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 SNORD53B-201ENST00000577887 78 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 MIR4452-201ENST00000583004 71 ntBASIC1.92□□□□□ -2.1
SAMD1Q6SPF0 MIR26B-201ENST00000362251 77 ntBASIC1.9□□□□□ -2.11
SAMD1Q6SPF0 MIR548H4-201ENST00000408689 111 ntBASIC1.9□□□□□ -2.11
SAMD1Q6SPF0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.9□□□□□ -2.11
SAMD1Q6SPF0 RNA5SP363-201ENST00000365072 115 ntBASIC1.89□□□□□ -2.11
SAMD1Q6SPF0 MIR140-201ENST00000385282 100 ntBASIC1.89□□□□□ -2.11
SAMD1Q6SPF0 AL353765.1-201ENST00000605514 183 ntBASIC1.89□□□□□ -2.11
SAMD1Q6SPF0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SAMD1Q6SPF0 SNORD118-201ENST00000363593 134 ntBASIC1.88□□□□□ -2.11
SAMD1Q6SPF0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.88□□□□□ -2.11
SAMD1Q6SPF0 MIR6779-201ENST00000617283 64 ntBASIC1.88□□□□□ -2.11
SAMD1Q6SPF0 MIR3170-201ENST00000582699 77 ntBASIC1.87□□□□□ -2.11
SAMD1Q6SPF0 MIR6888-201ENST00000621977 67 ntBASIC1.87□□□□□ -2.11
SAMD1Q6SPF0 MIR1323-201ENST00000408090 73 ntBASIC1.86□□□□□ -2.11
SAMD1Q6SPF0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 SNORD114-26-201ENST00000363543 72 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 SNORA67.6-201ENST00000391093 99 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 RNU6-955P-201ENST00000410497 104 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 SNORA40.8-201ENST00000411034 126 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 RNA5SP102-201ENST00000516865 106 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.84□□□□□ -2.11
SAMD1Q6SPF0 MIR760-201ENST00000390220 80 ntBASIC1.82□□□□□ -2.12
SAMD1Q6SPF0 MIR4464-201ENST00000580818 92 ntBASIC1.82□□□□□ -2.12
SAMD1Q6SPF0 SNORD71-201ENST00000411292 86 ntBASIC1.81□□□□□ -2.12
SAMD1Q6SPF0 RNU4-54P-201ENST00000516428 129 ntBASIC1.81□□□□□ -2.12
SAMD1Q6SPF0 MIR6755-201ENST00000619993 66 ntBASIC1.81□□□□□ -2.12
SAMD1Q6SPF0 uc_338.36-201ENST00000622331 158 ntBASIC1.81□□□□□ -2.12
SAMD1Q6SPF0 Y_RNA.321-201ENST00000365149 102 ntBASIC1.8□□□□□ -2.12
SAMD1Q6SPF0 RNU6-894P-201ENST00000517094 105 ntBASIC1.8□□□□□ -2.12
SAMD1Q6SPF0 AL445584.3-201ENST00000617173 78 ntBASIC1.8□□□□□ -2.12
SAMD1Q6SPF0 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
SAMD1Q6SPF0 SNORD114-22-201ENST00000365423 72 ntBASIC1.79□□□□□ -2.12
SAMD1Q6SPF0 RNU6-1111P-201ENST00000391118 107 ntBASIC1.79□□□□□ -2.12
SAMD1Q6SPF0 MIR3925-201ENST00000584674 77 ntBASIC1.79□□□□□ -2.12
SAMD1Q6SPF0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SAMD1Q6SPF0 MIR1304-201ENST00000408243 91 ntBASIC1.77□□□□□ -2.13
SAMD1Q6SPF0 MIR6515-201ENST00000619843 57 ntBASIC1.77□□□□□ -2.13
SAMD1Q6SPF0 RNU6-1326P-201ENST00000391262 107 ntBASIC1.76□□□□□ -2.13
SAMD1Q6SPF0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SAMD1Q6SPF0 MIR876-201ENST00000401147 81 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 RNU6-1133P-201ENST00000410963 100 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 RNU7-129P-201ENST00000516128 62 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 SNORA31.24-201ENST00000517232 57 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 AC022709.1-201ENST00000615967 87 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 MIR499B-201ENST00000636498 73 ntBASIC1.74□□□□□ -2.13
SAMD1Q6SPF0 MIR4317-201ENST00000637586 65 ntBASIC1.73□□□□□ -2.13
SAMD1Q6SPF0 Y_RNA.345-201ENST00000365384 92 ntBASIC1.72□□□□□ -2.13
SAMD1Q6SPF0 SNORA62.4-201ENST00000365504 151 ntBASIC1.72□□□□□ -2.13
SAMD1Q6SPF0 MIR518A1-201ENST00000385068 85 ntBASIC1.72□□□□□ -2.13
SAMD1Q6SPF0 MIR4421-201ENST00000578133 69 ntBASIC1.72□□□□□ -2.13
SAMD1Q6SPF0 AL391099.1-201ENST00000624635 187 ntBASIC1.71□□□□□ -2.14
SAMD1Q6SPF0 RNA5SP128-201ENST00000365305 116 ntBASIC1.7□□□□□ -2.14
SAMD1Q6SPF0 MIR106A-201ENST00000384870 81 ntBASIC1.7□□□□□ -2.14
SAMD1Q6SPF0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.7□□□□□ -2.14
SAMD1Q6SPF0 SCARNA11.2-201ENST00000517183 154 ntBASIC1.69□□□□□ -2.14
SAMD1Q6SPF0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 Y_RNA.613-201ENST00000410726 97 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 RNU6-848P-201ENST00000515948 107 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 RNU6-617P-201ENST00000516147 107 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 RNU6-473P-201ENST00000516164 107 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.68□□□□□ -2.14
SAMD1Q6SPF0 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SAMD1Q6SPF0 Y_RNA.206-201ENST00000364136 102 ntBASIC1.67□□□□□ -2.14
SAMD1Q6SPF0 MIR548Q-201ENST00000408404 100 ntBASIC1.67□□□□□ -2.14
SAMD1Q6SPF0 AL353770.2-201ENST00000620024 78 ntBASIC1.67□□□□□ -2.14
SAMD1Q6SPF0 RNA5SP98-201ENST00000363158 137 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms