Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 RNU6-875P-201ENST00000516488 106 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 FTX_4.1-201ENST00000616291 147 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 RNU6-806P-201ENST00000365147 105 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 SNORA24B-201ENST00000384176 131 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 RNU6-616P-201ENST00000384353 107 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 SNORA41B-201ENST00000384785 128 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 MIR1277-201ENST00000408536 78 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 RNU7-153P-201ENST00000516455 62 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 MIR4694-201ENST00000578534 80 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 MIR4760-201ENST00000585040 80 ntBASIC-0.51□□□□□ -2.49
COL7A1Q02388 RNU6-682P-201ENST00000363843 106 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-1289P-201ENST00000384431 106 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-554P-201ENST00000410466 106 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.52□□□□□ -2.49
COL7A1Q02388 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-182P-201ENST00000516970 105 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 MIR4643-201ENST00000577473 78 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 U6.81-201ENST00000612550 106 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 MIR579-201ENST00000385221 98 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 MIR548Q-201ENST00000408404 100 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU7-107P-201ENST00000459121 61 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-904P-201ENST00000516206 101 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-303P-201ENST00000517091 106 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 SNORD116.3-201ENST00000517176 78 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 MIR5690-201ENST00000583739 73 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 RNU6-92P-201ENST00000605893 104 ntBASIC-0.52□□□□□ -2.49
COL7A1Q02388 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-694P-201ENST00000364071 147 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-450P-201ENST00000364654 107 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR519C-201ENST00000385053 87 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MT-TD-201ENST00000387419 68 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
COL7A1Q02388 SNORD77.2-201ENST00000391045 68 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-141P-201ENST00000410499 105 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-752P-201ENST00000516376 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-345P-201ENST00000517001 107 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNY3P2-201ENST00000362918 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.519-201ENST00000384553 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR548AA1-201ENST00000384971 97 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR1236-201ENST00000408340 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-542P-201ENST00000516405 103 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 RNU6-426P-201ENST00000516464 97 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR4680-201ENST00000580906 66 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR664A-201ENST00000626086 82 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 AC134503.1-201ENST00000633048 54 ntBASIC-0.53□□□□□ -2.49
COL7A1Q02388 MIR202-201ENST00000362219 110 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-940P-201ENST00000363433 104 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR548D2-201ENST00000384955 97 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR1302-11-201ENST00000408051 138 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR1302-9-201ENST00000408365 138 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR1302-10-201ENST00000408734 138 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-772P-201ENST00000516042 105 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-518P-201ENST00000516056 96 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU7-174P-201ENST00000516248 59 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNY3P16-201ENST00000516338 101 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RPS29P30-201ENST00000600975 111 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR1302-2-201ENST00000607096 138 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-1169P-201ENST00000363537 103 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNY4P13-201ENST00000384284 96 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-239P-201ENST00000390990 99 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNY4P18-201ENST00000391107 89 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR1252-201ENST00000408861 65 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-985P-201ENST00000410182 104 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RPL35AP4-201ENST00000412007 102 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 SNORD19B-201ENST00000459623 84 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 SNORD63.2-201ENST00000516303 64 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR3646-201ENST00000578301 84 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 MIR7978-201ENST00000636158 59 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 SNORD42.2-201ENST00000365570 69 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.54□□□□□ -2.5
COL7A1Q02388 Y_RNA.434-201ENST00000384090 100 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms