Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 AL691482.2-201ENST00000457453 84 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 SCARNA18B-201ENST00000458806 135 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 AC026421.1-201ENST00000519101 163 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 MIR3133-201ENST00000583157 78 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.1□□□□□ -2.59
SIX3O95343 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 SNORA62.4-201ENST00000365504 151 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 SNORA24B-201ENST00000384176 131 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 SNORD64-201ENST00000386683 67 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 SNORA19.1-201ENST00000410656 129 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 snoU13.17-201ENST00000458802 104 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 AC140658.3-201ENST00000567603 271 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 MIR3668-201ENST00000582138 75 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 AL353803.5-201ENST00000599815 141 ntBASIC-1.11□□□□□ -2.59
SIX3O95343 SNORD115-23-201ENST00000364461 82 ntBASIC-1.12□□□□□ -2.59
SIX3O95343 MIR1255B2-201ENST00000408618 67 ntBASIC-1.12□□□□□ -2.59
SIX3O95343 RNU7-24P-201ENST00000458867 62 ntBASIC-1.12□□□□□ -2.59
SIX3O95343 YWHAEP3-201ENST00000582767 121 ntBASIC-1.12□□□□□ -2.59
SIX3O95343 SNORA33.1-201ENST00000364957 130 ntBASIC-1.13□□□□□ -2.59
SIX3O95343 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.13□□□□□ -2.59
SIX3O95343 RNU6-904P-201ENST00000516206 101 ntBASIC-1.13□□□□□ -2.59
SIX3O95343 AC138207.3-201ENST00000585289 166 ntBASIC-1.13□□□□□ -2.59
SIX3O95343 RNU6-824P-201ENST00000363724 104 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 SNORD116-10-201ENST00000363791 102 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 MIR147A-201ENST00000385079 72 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 MIR382-201ENST00000637119 76 ntBASIC-1.14□□□□□ -2.59
SIX3O95343 RNU6-774P-201ENST00000363238 107 ntBASIC-1.15□□□□□ -2.59
SIX3O95343 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.15□□□□□ -2.59
SIX3O95343 CYP3A54P-201ENST00000566950 75 ntBASIC-1.15□□□□□ -2.59
SIX3O95343 MIR5591-201ENST00000578248 65 ntBASIC-1.15□□□□□ -2.59
SIX3O95343 AL445584.3-201ENST00000617173 78 ntBASIC-1.15□□□□□ -2.59
SIX3O95343 RNU6-704P-201ENST00000364162 103 ntBASIC-1.16□□□□□ -2.6
SIX3O95343 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
SIX3O95343 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.16□□□□□ -2.6
SIX3O95343 RNU6-162P-201ENST00000516228 103 ntBASIC-1.16□□□□□ -2.6
SIX3O95343 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.16□□□□□ -2.6
SIX3O95343 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.16□□□□□ -2.6
SIX3O95343 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.17□□□□□ -2.6
SIX3O95343 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.17□□□□□ -2.6
SIX3O95343 snoU83B.1-201ENST00000517136 88 ntBASIC-1.17□□□□□ -2.6
SIX3O95343 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.18□□□□□ -2.6
SIX3O95343 AC008267.6-201ENST00000441664 139 ntBASIC-1.18□□□□□ -2.6
SIX3O95343 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.18□□□□□ -2.6
SIX3O95343 MIR3671-201ENST00000580455 88 ntBASIC-1.18□□□□□ -2.6
SIX3O95343 MIR3657-201ENST00000584818 117 ntBASIC-1.18□□□□□ -2.6
SIX3O95343 RNU7-61P-201ENST00000515897 61 ntBASIC-1.19□□□□□ -2.6
SIX3O95343 MIR4796-201ENST00000580742 81 ntBASIC-1.19□□□□□ -2.6
SIX3O95343 MIR6888-201ENST00000621977 67 ntBASIC-1.19□□□□□ -2.6
SIX3O95343 MIR6129-201ENST00000616087 109 ntBASIC-1.2□□□□□ -2.6
SIX3O95343 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.21□□□□□ -2.6
SIX3O95343 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.21□□□□□ -2.6
SIX3O95343 MIR590-201ENST00000385008 97 ntBASIC-1.21□□□□□ -2.6
SIX3O95343 MIR1236-201ENST00000408340 102 ntBASIC-1.21□□□□□ -2.6
SIX3O95343 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.22□□□□□ -2.6
SIX3O95343 RNU7-153P-201ENST00000516455 62 ntBASIC-1.22□□□□□ -2.6
SIX3O95343 MIR4464-201ENST00000580818 92 ntBASIC-1.22□□□□□ -2.6
SIX3O95343 RNU6-746P-201ENST00000384112 109 ntBASIC-1.23□□□□□ -2.61
SIX3O95343 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.23□□□□□ -2.61
SIX3O95343 AL450471.1-201ENST00000447509 127 ntBASIC-1.23□□□□□ -2.61
SIX3O95343 SNORA2.1-201ENST00000363089 137 ntBASIC-1.24□□□□□ -2.61
SIX3O95343 RNU6-959P-201ENST00000384671 107 ntBASIC-1.24□□□□□ -2.61
SIX3O95343 RNU6-109P-201ENST00000516364 107 ntBASIC-1.24□□□□□ -2.61
SIX3O95343 RNU6-184P-201ENST00000516514 107 ntBASIC-1.24□□□□□ -2.61
SIX3O95343 RNU6-537P-201ENST00000517277 103 ntBASIC-1.24□□□□□ -2.61
SIX3O95343 RNU6-924P-201ENST00000362926 108 ntBASIC-1.25□□□□□ -2.61
SIX3O95343 RNU6-980P-201ENST00000516925 103 ntBASIC-1.25□□□□□ -2.61
SIX3O95343 MIR4770-201ENST00000579149 58 ntBASIC-1.25□□□□□ -2.61
SIX3O95343 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.25□□□□□ -2.61
SIX3O95343 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.27□□□□□ -2.61
SIX3O95343 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.27□□□□□ -2.61
SIX3O95343 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.28□□□□□ -2.61
SIX3O95343 U7.3-201ENST00000616123 62 ntBASIC-1.28□□□□□ -2.61
SIX3O95343 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.28□□□□□ -2.61
SIX3O95343 MIR519A2-201ENST00000384990 87 ntBASIC-1.29□□□□□ -2.62
SIX3O95343 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.29□□□□□ -2.62
SIX3O95343 RNU6-518P-201ENST00000516056 96 ntBASIC-1.29□□□□□ -2.62
SIX3O95343 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 MIR548C-201ENST00000384815 97 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 MIR521-2-201ENST00000384818 87 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 RNU6-554P-201ENST00000410466 106 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 U6.81-201ENST00000612550 106 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.3□□□□□ -2.62
SIX3O95343 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.31□□□□□ -2.62
SIX3O95343 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.31□□□□□ -2.62
SIX3O95343 SNORD63.1-201ENST00000516178 80 ntBASIC-1.32□□□□□ -2.62
SIX3O95343 AL365222.1-201ENST00000614661 98 ntBASIC-1.32□□□□□ -2.62
SIX3O95343 RNU6-106P-201ENST00000384405 107 ntBASIC-1.33□□□□□ -2.62
SIX3O95343 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.33□□□□□ -2.62
SIX3O95343 RNU7-88P-201ENST00000458752 63 ntBASIC-1.33□□□□□ -2.62
SIX3O95343 RNU7-134P-201ENST00000458997 64 ntBASIC-1.33□□□□□ -2.62
SIX3O95343 SNORA19-201ENST00000384737 128 ntBASIC-1.34□□□□□ -2.62
SIX3O95343 RNU6-479P-201ENST00000516348 105 ntBASIC-1.34□□□□□ -2.62
SIX3O95343 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.34□□□□□ -2.62
SIX3O95343 AC132825.6-201ENST00000638861 357 ntBASIC-1.34□□□□□ -2.62
SIX3O95343 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.35□□□□□ -2.63
SIX3O95343 SNORD18.1-201ENST00000363807 70 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 304.9 ms