Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.21□□□□□ -2.76
LSM1O15116 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
LSM1O15116 U6.95-201ENST00000636931 70 ntBASIC-2.21□□□□□ -2.76
LSM1O15116 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.22□□□□□ -2.76
LSM1O15116 MIR1236-201ENST00000408340 102 ntBASIC-2.22□□□□□ -2.76
LSM1O15116 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.22□□□□□ -2.76
LSM1O15116 MIR4520-1-201ENST00000582609 70 ntBASIC-2.22□□□□□ -2.76
LSM1O15116 RNU6-694P-201ENST00000364071 147 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 MIR548A3-201ENST00000385297 97 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 RNU7-200P-201ENST00000516105 62 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 RNU6-158P-201ENST00000517104 100 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 MIR548AG1-201ENST00000579932 66 ntBASIC-2.23□□□□□ -2.77
LSM1O15116 RNU6-774P-201ENST00000363238 107 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 RNU6-246P-201ENST00000384702 107 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 RNU6-182P-201ENST00000516970 105 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 RNU6-537P-201ENST00000517277 103 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 AP002795.1-201ENST00000534879 84 ntBASIC-2.24□□□□□ -2.77
LSM1O15116 RNU6-340P-201ENST00000364005 107 ntBASIC-2.25□□□□□ -2.77
LSM1O15116 RNU6-164P-201ENST00000364604 103 ntBASIC-2.25□□□□□ -2.77
LSM1O15116 SNORD19-201ENST00000391191 68 ntBASIC-2.25□□□□□ -2.77
LSM1O15116 MIR507-201ENST00000385234 94 ntBASIC-2.26□□□□□ -2.77
LSM1O15116 RNU6-659P-201ENST00000516454 104 ntBASIC-2.26□□□□□ -2.77
LSM1O15116 RNU6-971P-201ENST00000516920 106 ntBASIC-2.26□□□□□ -2.77
LSM1O15116 MIR6502-201ENST00000617296 76 ntBASIC-2.26□□□□□ -2.77
LSM1O15116 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.27□□□□□ -2.77
LSM1O15116 RNU6-656P-201ENST00000516785 107 ntBASIC-2.27□□□□□ -2.77
LSM1O15116 MIR4441-201ENST00000582623 100 ntBASIC-2.27□□□□□ -2.77
LSM1O15116 MIR365A-201ENST00000362260 87 ntBASIC-2.28□□□□□ -2.77
LSM1O15116 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.28□□□□□ -2.77
LSM1O15116 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.28□□□□□ -2.77
LSM1O15116 AL450471.1-201ENST00000447509 127 ntBASIC-2.28□□□□□ -2.77
LSM1O15116 U7.5-201ENST00000517224 61 ntBASIC-2.28□□□□□ -2.77
LSM1O15116 RNU6-540P-201ENST00000384622 101 ntBASIC-2.29□□□□□ -2.78
LSM1O15116 U2.7-201ENST00000619197 100 ntBASIC-2.29□□□□□ -2.78
LSM1O15116 AC091912.2-201ENST00000624798 167 ntBASIC-2.29□□□□□ -2.78
LSM1O15116 MIR5683-201ENST00000636514 76 ntBASIC-2.29□□□□□ -2.78
LSM1O15116 RNU6-880P-201ENST00000384526 107 ntBASIC-2.3□□□□□ -2.78
LSM1O15116 MIR1468-201ENST00000410600 86 ntBASIC-2.3□□□□□ -2.78
LSM1O15116 RNU6-412P-201ENST00000516434 106 ntBASIC-2.3□□□□□ -2.78
LSM1O15116 RNU7-153P-201ENST00000516455 62 ntBASIC-2.3□□□□□ -2.78
LSM1O15116 RNU6-681P-201ENST00000364012 104 ntBASIC-2.31□□□□□ -2.78
LSM1O15116 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.31□□□□□ -2.78
LSM1O15116 AL035461.1-201ENST00000421490 332 ntBASIC-2.31□□□□□ -2.78
LSM1O15116 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.31□□□□□ -2.78
LSM1O15116 RNU6-807P-201ENST00000516805 107 ntBASIC-2.31□□□□□ -2.78
LSM1O15116 MIR4490-201ENST00000582647 84 ntBASIC-2.31□□□□□ -2.78
LSM1O15116 RNU7-88P-201ENST00000458752 63 ntBASIC-2.33□□□□□ -2.78
LSM1O15116 RNU7-61P-201ENST00000515897 61 ntBASIC-2.33□□□□□ -2.78
LSM1O15116 RNU6-1212P-201ENST00000517023 104 ntBASIC-2.33□□□□□ -2.78
LSM1O15116 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.34□□□□□ -2.78
LSM1O15116 RNU6-983P-201ENST00000516004 103 ntBASIC-2.34□□□□□ -2.78
LSM1O15116 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.35□□□□□ -2.79
LSM1O15116 RNY1P5-201ENST00000383890 115 ntBASIC-2.36□□□□□ -2.79
LSM1O15116 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.36□□□□□ -2.79
LSM1O15116 Y_RNA.464-201ENST00000384282 110 ntBASIC-2.37□□□□□ -2.79
LSM1O15116 Y_RNA.506-201ENST00000384494 102 ntBASIC-2.37□□□□□ -2.79
LSM1O15116 RNA5SP86-201ENST00000390869 98 ntBASIC-2.37□□□□□ -2.79
LSM1O15116 SNORD77.2-201ENST00000391045 68 ntBASIC-2.37□□□□□ -2.79
LSM1O15116 MIR6874-201ENST00000635894 71 ntBASIC-2.37□□□□□ -2.79
LSM1O15116 SNORD116-21-201ENST00000384507 92 ntBASIC-2.38□□□□□ -2.79
LSM1O15116 MIR590-201ENST00000385008 97 ntBASIC-2.38□□□□□ -2.79
LSM1O15116 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.38□□□□□ -2.79
LSM1O15116 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.39□□□□□ -2.79
LSM1O15116 AL078595.1-201ENST00000404458 226 ntBASIC-2.39□□□□□ -2.79
LSM1O15116 AC090616.4-201ENST00000448026 115 ntBASIC-2.39□□□□□ -2.79
LSM1O15116 SNORD115-27-201ENST00000364430 82 ntBASIC-2.4□□□□□ -2.79
LSM1O15116 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.4□□□□□ -2.79
LSM1O15116 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.41□□□□□ -2.8
LSM1O15116 RNU6-478P-201ENST00000363904 110 ntBASIC-2.41□□□□□ -2.8
LSM1O15116 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.41□□□□□ -2.8
LSM1O15116 RNU6-346P-201ENST00000516288 111 ntBASIC-2.41□□□□□ -2.8
LSM1O15116 U7.3-201ENST00000616123 62 ntBASIC-2.41□□□□□ -2.8
LSM1O15116 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.42□□□□□ -2.8
LSM1O15116 SNORD18.1-201ENST00000363807 70 ntBASIC-2.42□□□□□ -2.8
LSM1O15116 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.42□□□□□ -2.8
LSM1O15116 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.42□□□□□ -2.8
LSM1O15116 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.43□□□□□ -2.8
LSM1O15116 RNU6-645P-201ENST00000364649 106 ntBASIC-2.43□□□□□ -2.8
LSM1O15116 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.43□□□□□ -2.8
LSM1O15116 MIR519C-201ENST00000385053 87 ntBASIC-2.44□□□□□ -2.8
LSM1O15116 MTATP8P2-201ENST00000435212 202 ntBASIC-2.44□□□□□ -2.8
LSM1O15116 RNU6-168P-201ENST00000516189 101 ntBASIC-2.44□□□□□ -2.8
LSM1O15116 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.44□□□□□ -2.8
LSM1O15116 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 MIR1302-5-201ENST00000408164 150 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 MIR548H1-201ENST00000408610 102 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 RPL35AP4-201ENST00000412007 102 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 RNU6-162P-201ENST00000516228 103 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 RNU6-255P-201ENST00000516957 105 ntBASIC-2.45□□□□□ -2.8
LSM1O15116 SNORD116-14-201ENST00000383894 92 ntBASIC-2.47□□□□□ -2.8
LSM1O15116 SNORD116-17-201ENST00000383929 92 ntBASIC-2.47□□□□□ -2.8
LSM1O15116 SNORD116-15-201ENST00000384445 92 ntBASIC-2.47□□□□□ -2.8
LSM1O15116 SNORD116-19-201ENST00000384729 92 ntBASIC-2.47□□□□□ -2.8
LSM1O15116 RNU7-174P-201ENST00000516248 59 ntBASIC-2.47□□□□□ -2.8
LSM1O15116 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.48□□□□□ -2.81
LSM1O15116 RNU6-458P-201ENST00000384179 107 ntBASIC-2.48□□□□□ -2.81
LSM1O15116 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.48□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 434.7 ms