Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SCARNA21.1-201ENST00000515996 128 ntBASIC1.13□□□□□ -2.23
PCDHB9Q9Y5E1 uc_338.10-201ENST00000621872 182 ntBASIC1.13□□□□□ -2.23
PCDHB9Q9Y5E1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
PCDHB9Q9Y5E1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
PCDHB9Q9Y5E1 SNORA40.8-201ENST00000411034 126 ntBASIC1.11□□□□□ -2.23
PCDHB9Q9Y5E1 SNORA33.1-201ENST00000364957 130 ntBASIC1.1□□□□□ -2.23
PCDHB9Q9Y5E1 RNU6-499P-201ENST00000365615 107 ntBASIC1.1□□□□□ -2.23
PCDHB9Q9Y5E1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.1□□□□□ -2.23
PCDHB9Q9Y5E1 Y_RNA.125-201ENST00000363371 111 ntBASIC1.09□□□□□ -2.23
PCDHB9Q9Y5E1 RNU6-302P-201ENST00000365249 107 ntBASIC1.09□□□□□ -2.23
PCDHB9Q9Y5E1 RNU6-110P-201ENST00000384508 104 ntBASIC1.09□□□□□ -2.23
PCDHB9Q9Y5E1 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
PCDHB9Q9Y5E1 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
PCDHB9Q9Y5E1 SNORA25.5-201ENST00000363782 126 ntBASIC1.08□□□□□ -2.24
PCDHB9Q9Y5E1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PCDHB9Q9Y5E1 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
PCDHB9Q9Y5E1 RN7SL793P-201ENST00000583259 296 ntBASIC1.07□□□□□ -2.24
PCDHB9Q9Y5E1 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
PCDHB9Q9Y5E1 U2.7-201ENST00000619197 100 ntBASIC1.07□□□□□ -2.24
PCDHB9Q9Y5E1 SNORA2A-201ENST00000383885 135 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 MIR548C-201ENST00000384815 97 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 MIR216A-201ENST00000385063 110 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 SNORD71-201ENST00000411292 86 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 U7.6-201ENST00000610841 64 ntBASIC1.06□□□□□ -2.24
PCDHB9Q9Y5E1 MIR518A1-201ENST00000385068 85 ntBASIC1.05□□□□□ -2.24
PCDHB9Q9Y5E1 AC244090.1-201ENST00000441884 93 ntBASIC1.05□□□□□ -2.24
PCDHB9Q9Y5E1 RNA5SP436-201ENST00000516020 115 ntBASIC1.05□□□□□ -2.24
PCDHB9Q9Y5E1 MIR548V-201ENST00000584165 80 ntBASIC1.05□□□□□ -2.24
PCDHB9Q9Y5E1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
PCDHB9Q9Y5E1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PCDHB9Q9Y5E1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
PCDHB9Q9Y5E1 MIR20A-201ENST00000362279 71 ntBASIC1.04□□□□□ -2.24
PCDHB9Q9Y5E1 RNA5SP192-201ENST00000364404 120 ntBASIC1.04□□□□□ -2.24
PCDHB9Q9Y5E1 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
PCDHB9Q9Y5E1 RNU7-174P-201ENST00000516248 59 ntBASIC1.03□□□□□ -2.24
PCDHB9Q9Y5E1 RNU6-229P-201ENST00000516614 102 ntBASIC1.03□□□□□ -2.24
PCDHB9Q9Y5E1 RNU6-940P-201ENST00000363433 104 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-848P-201ENST00000515948 107 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-617P-201ENST00000516147 107 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-473P-201ENST00000516164 107 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-1049P-201ENST00000516414 107 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
PCDHB9Q9Y5E1 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
PCDHB9Q9Y5E1 Y_RNA.423-201ENST00000384057 113 ntBASIC1.01□□□□□ -2.25
PCDHB9Q9Y5E1 MIR517B-201ENST00000385102 67 ntBASIC1.01□□□□□ -2.25
PCDHB9Q9Y5E1 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
PCDHB9Q9Y5E1 MIR516B1-201ENST00000385211 90 ntBASIC1□□□□□ -2.25
PCDHB9Q9Y5E1 PSMC1P5-201ENST00000512850 177 ntBASIC1□□□□□ -2.25
PCDHB9Q9Y5E1 CYP3A137P-201ENST00000562436 69 ntBASIC1□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-92P-201ENST00000605893 104 ntBASIC1□□□□□ -2.25
PCDHB9Q9Y5E1 MIR6755-201ENST00000619993 66 ntBASIC1□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-698P-201ENST00000363523 107 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 SNORD114-29-201ENST00000364819 70 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-34P-201ENST00000364874 107 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 Y_RNA.374-201ENST00000365606 101 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 MIR633-201ENST00000384821 98 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 MIR630-201ENST00000384957 97 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 MTND4LP19-201ENST00000403051 166 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 AC098934.3-201ENST00000430450 190 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.99□□□□□ -2.25
PCDHB9Q9Y5E1 MIR466-201ENST00000580653 84 ntBASIC0.98□□□□□ -2.25
PCDHB9Q9Y5E1 U6.96-201ENST00000636425 70 ntBASIC0.98□□□□□ -2.25
PCDHB9Q9Y5E1 AC079150.2-201ENST00000443733 78 ntBASIC0.97□□□□□ -2.25
PCDHB9Q9Y5E1 SNORD2-201ENST00000459163 69 ntBASIC0.97□□□□□ -2.25
PCDHB9Q9Y5E1 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
PCDHB9Q9Y5E1 AC243829.6-201ENST00000612652 106 ntBASIC0.97□□□□□ -2.25
PCDHB9Q9Y5E1 MIR501-201ENST00000390204 84 ntBASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 SNORD113-2-201ENST00000391082 72 ntBASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 RNU6-122P-201ENST00000516818 107 ntBASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 CYP3A54P-201ENST00000566950 75 ntBASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 MIR4677-201ENST00000584153 80 ntBASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.96□□□□□ -2.26
PCDHB9Q9Y5E1 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
PCDHB9Q9Y5E1 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
PCDHB9Q9Y5E1 RNU7-188P-201ENST00000517063 64 ntBASIC0.95□□□□□ -2.26
PCDHB9Q9Y5E1 MIR4653-201ENST00000585107 83 ntBASIC0.95□□□□□ -2.26
PCDHB9Q9Y5E1 U4.4-201ENST00000620626 117 ntBASIC0.95□□□□□ -2.26
PCDHB9Q9Y5E1 SNORA75.1-201ENST00000391130 148 ntBASIC0.94□□□□□ -2.26
PCDHB9Q9Y5E1 MIR193B-201ENST00000384907 83 ntBASIC0.93□□□□□ -2.26
PCDHB9Q9Y5E1 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
PCDHB9Q9Y5E1 MIR548AD-201ENST00000584780 82 ntBASIC0.93□□□□□ -2.26
PCDHB9Q9Y5E1 SNORD60.1-201ENST00000362451 73 ntBASIC0.92□□□□□ -2.26
PCDHB9Q9Y5E1 MIR760-201ENST00000390220 80 ntBASIC0.92□□□□□ -2.26
PCDHB9Q9Y5E1 AC090617.8-201ENST00000623339 167 ntBASIC0.92□□□□□ -2.26
PCDHB9Q9Y5E1 RNU6-1079P-201ENST00000362861 110 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 RNU6-863P-201ENST00000515989 104 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 MIR1273G-201ENST00000577677 100 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 MIR4698-201ENST00000577795 80 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 AC243829.3-201ENST00000622177 108 ntBASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.91□□□□□ -2.26
PCDHB9Q9Y5E1 SNORA49-201ENST00000386157 136 ntBASIC0.9□□□□□ -2.27
PCDHB9Q9Y5E1 RNU6-175P-201ENST00000516896 107 ntBASIC0.9□□□□□ -2.27
PCDHB9Q9Y5E1 RNU6-829P-201ENST00000363700 112 ntBASIC0.89□□□□□ -2.27
PCDHB9Q9Y5E1 AL021921.1-201ENST00000442774 93 ntBASIC0.89□□□□□ -2.27
PCDHB9Q9Y5E1 Y_RNA.30-201ENST00000362572 97 ntBASIC0.88□□□□□ -2.27
PCDHB9Q9Y5E1 Y_RNA.246-201ENST00000364495 108 ntBASIC0.88□□□□□ -2.27
PCDHB9Q9Y5E1 RNA5SP128-201ENST00000365305 116 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms