Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RNU6-473P-201ENST00000516164 107 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-1015P-201ENST00000517121 99 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 MIR1273G-201ENST00000577677 100 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 MIR3657-201ENST00000584818 117 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 MIR6755-201ENST00000619993 66 ntBASIC0.56□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-990P-201ENST00000364385 104 ntBASIC0.55□□□□□ -2.32
CTDP1Q9Y5B0 SCARNA17.3-201ENST00000516381 125 ntBASIC0.55□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-687P-201ENST00000516443 89 ntBASIC0.55□□□□□ -2.32
CTDP1Q9Y5B0 AC243829.6-201ENST00000612652 106 ntBASIC0.55□□□□□ -2.32
CTDP1Q9Y5B0 SNORD44.1-201ENST00000363202 61 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-871P-201ENST00000516122 100 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-523P-201ENST00000516304 54 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 MIR8053-201ENST00000613344 75 ntBASIC0.54□□□□□ -2.32
CTDP1Q9Y5B0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
CTDP1Q9Y5B0 SNORA2.1-201ENST00000363089 137 ntBASIC0.53□□□□□ -2.32
CTDP1Q9Y5B0 RNU6-604P-201ENST00000390917 100 ntBASIC0.53□□□□□ -2.32
CTDP1Q9Y5B0 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
CTDP1Q9Y5B0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.52□□□□□ -2.33
CTDP1Q9Y5B0 RNU7-129P-201ENST00000516128 62 ntBASIC0.52□□□□□ -2.33
CTDP1Q9Y5B0 RNA5SP147-201ENST00000516493 109 ntBASIC0.52□□□□□ -2.33
CTDP1Q9Y5B0 RNA5SP128-201ENST00000365305 116 ntBASIC0.51□□□□□ -2.33
CTDP1Q9Y5B0 MIR516B1-201ENST00000385211 90 ntBASIC0.51□□□□□ -2.33
CTDP1Q9Y5B0 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
CTDP1Q9Y5B0 MIR501-201ENST00000390204 84 ntBASIC0.5□□□□□ -2.33
CTDP1Q9Y5B0 RNU6-634P-201ENST00000459134 106 ntBASIC0.5□□□□□ -2.33
CTDP1Q9Y5B0 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
CTDP1Q9Y5B0 SNORD115-22-201ENST00000364456 82 ntBASIC0.49□□□□□ -2.33
CTDP1Q9Y5B0 SNORD45A-201ENST00000384512 84 ntBASIC0.49□□□□□ -2.33
CTDP1Q9Y5B0 AC073261.1-201ENST00000429409 121 ntBASIC0.49□□□□□ -2.33
CTDP1Q9Y5B0 MIR4677-201ENST00000584153 80 ntBASIC0.49□□□□□ -2.33
CTDP1Q9Y5B0 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
CTDP1Q9Y5B0 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
CTDP1Q9Y5B0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.48□□□□□ -2.33
CTDP1Q9Y5B0 RNU6-895P-201ENST00000384125 103 ntBASIC0.48□□□□□ -2.33
CTDP1Q9Y5B0 MIR499B-201ENST00000636498 73 ntBASIC0.48□□□□□ -2.33
CTDP1Q9Y5B0 MIR20A-201ENST00000362279 71 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 SNORD114-29-201ENST00000364819 70 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 SNORD115-31-201ENST00000365318 82 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 AC021146.9-201ENST00000512503 156 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 RNU6-881P-201ENST00000516813 102 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 SNORA40.17-201ENST00000517256 115 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 MIR548AD-201ENST00000584780 82 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 AC084368.1-201ENST00000620935 65 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 MIR924-201ENST00000638017 53 ntBASIC0.47□□□□□ -2.33
CTDP1Q9Y5B0 SNORA9.1-201ENST00000362412 131 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 Y_RNA.250-201ENST00000364542 110 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 SNORA63.6-201ENST00000364921 119 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 MIR582-201ENST00000365731 98 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 MIR548E-201ENST00000408287 88 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 snoU13.13-201ENST00000458842 104 ntBASIC0.46□□□□□ -2.34
CTDP1Q9Y5B0 SNORD113.1-201ENST00000363280 73 ntBASIC0.45□□□□□ -2.34
CTDP1Q9Y5B0 RNU7-188P-201ENST00000517063 64 ntBASIC0.45□□□□□ -2.34
CTDP1Q9Y5B0 RNA5SP330-201ENST00000517096 96 ntBASIC0.45□□□□□ -2.34
CTDP1Q9Y5B0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.45□□□□□ -2.34
CTDP1Q9Y5B0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 RNA5SP62-201ENST00000363457 110 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 RNA5SP457-201ENST00000363657 124 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-1162P-201ENST00000384443 104 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-982P-201ENST00000516216 102 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
CTDP1Q9Y5B0 MIR330-201ENST00000362196 94 ntBASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-540P-201ENST00000384622 101 ntBASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 SNORD30.1-201ENST00000391309 70 ntBASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 MTND4LP1-201ENST00000446263 157 ntBASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 MIR6739-201ENST00000622461 75 ntBASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.42□□□□□ -2.34
CTDP1Q9Y5B0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-1216P-201ENST00000362590 107 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-645P-201ENST00000364649 106 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 SNORA15B-2-201ENST00000384058 135 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-815P-201ENST00000384080 113 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 SNORA15B-1-201ENST00000384334 135 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 AC114801.3-201ENST00000510231 177 ntBASIC0.41□□□□□ -2.34
CTDP1Q9Y5B0 RNU6-663P-201ENST00000391105 106 ntBASIC0.4□□□□□ -2.35
CTDP1Q9Y5B0 RNA5SP134-201ENST00000516492 96 ntBASIC0.4□□□□□ -2.35
CTDP1Q9Y5B0 MIR3925-201ENST00000584674 77 ntBASIC0.4□□□□□ -2.35
CTDP1Q9Y5B0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.39□□□□□ -2.35
CTDP1Q9Y5B0 MIR521-2-201ENST00000384818 87 ntBASIC0.39□□□□□ -2.35
CTDP1Q9Y5B0 RNU6-127P-201ENST00000390897 107 ntBASIC0.39□□□□□ -2.35
CTDP1Q9Y5B0 Y_RNA.633-201ENST00000459107 95 ntBASIC0.39□□□□□ -2.35
CTDP1Q9Y5B0 SNORD2-201ENST00000459163 69 ntBASIC0.39□□□□□ -2.35
CTDP1Q9Y5B0 RNU6-668P-201ENST00000364180 107 ntBASIC0.38□□□□□ -2.35
CTDP1Q9Y5B0 SNORA75.1-201ENST00000391130 148 ntBASIC0.38□□□□□ -2.35
CTDP1Q9Y5B0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.38□□□□□ -2.35
CTDP1Q9Y5B0 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
CTDP1Q9Y5B0 AL109933.3-201ENST00000619095 188 ntBASIC0.38□□□□□ -2.35
CTDP1Q9Y5B0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 MIR876-201ENST00000401147 81 ntBASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 RNU6-656P-201ENST00000516785 107 ntBASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CTDP1Q9Y5B0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
CTDP1Q9Y5B0 RNU6-175P-201ENST00000516896 107 ntBASIC0.36□□□□□ -2.35
CTDP1Q9Y5B0 RN7SL660P-201ENST00000614852 299 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 279.6 ms