Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 SNORD110-201ENST00000408189 75 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU5B-6P-201ENST00000516765 68 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 AC018659.1-201ENST00000551083 169 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU1-29P-201ENST00000606574 126 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 SNORA2.1-201ENST00000363089 137 ntBASIC0.73□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-590P-201ENST00000365039 107 ntBASIC0.73□□□□□ -2.29
PTPN22Q9Y2R2 Y_RNA.407-201ENST00000383986 113 ntBASIC0.73□□□□□ -2.29
PTPN22Q9Y2R2 MIR3657-201ENST00000584818 117 ntBASIC0.73□□□□□ -2.29
PTPN22Q9Y2R2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.73□□□□□ -2.29
PTPN22Q9Y2R2 Y_RNA.250-201ENST00000364542 110 ntBASIC0.72□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-604P-201ENST00000390917 100 ntBASIC0.72□□□□□ -2.29
PTPN22Q9Y2R2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-229P-201ENST00000516614 102 ntBASIC0.71□□□□□ -2.3
PTPN22Q9Y2R2 SNORA70.25-201ENST00000612741 95 ntBASIC0.71□□□□□ -2.3
PTPN22Q9Y2R2 MIR6086-201ENST00000638065 55 ntBASIC0.71□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-649P-201ENST00000384463 107 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 MIR518A1-201ENST00000385068 85 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-788P-201ENST00000390967 104 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 SNORD71-201ENST00000411292 86 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 SCARNA17.3-201ENST00000516381 125 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-881P-201ENST00000516813 102 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 SNORA40.17-201ENST00000517256 115 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 MIR5087-201ENST00000635826 76 ntBASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PTPN22Q9Y2R2 SNORD113.1-201ENST00000363280 73 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 SNORD45A-201ENST00000384512 84 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-663P-201ENST00000391105 106 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 AC069271.1-201ENST00000445577 156 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 U7.6-201ENST00000610841 64 ntBASIC0.69□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-895P-201ENST00000384125 103 ntBASIC0.68□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
PTPN22Q9Y2R2 RNU4-54P-201ENST00000516428 129 ntBASIC0.68□□□□□ -2.3
PTPN22Q9Y2R2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.68□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-1216P-201ENST00000362590 107 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-990P-201ENST00000364385 104 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 RNU6-945P-201ENST00000383947 107 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 MIR203A-201ENST00000384836 110 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 SNORD30.1-201ENST00000391309 70 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 HMGN2P22-201ENST00000427588 175 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 MIR6739-201ENST00000622461 75 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 U6.111-201ENST00000636093 83 ntBASIC0.67□□□□□ -2.3
PTPN22Q9Y2R2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 SNORA2A-201ENST00000383885 135 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 MIR652-201ENST00000385278 98 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 RNA5SP285-201ENST00000516619 119 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 MIR548AE1-201ENST00000583292 70 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 uc_338.10-201ENST00000621872 182 ntBASIC0.66□□□□□ -2.3
PTPN22Q9Y2R2 SNORD116-24-201ENST00000384549 92 ntBASIC0.65□□□□□ -2.31
PTPN22Q9Y2R2 MIR4473-201ENST00000583731 91 ntBASIC0.65□□□□□ -2.31
PTPN22Q9Y2R2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.63□□□□□ -2.31
PTPN22Q9Y2R2 Y_RNA.386-201ENST00000383913 105 ntBASIC0.63□□□□□ -2.31
PTPN22Q9Y2R2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.63□□□□□ -2.31
PTPN22Q9Y2R2 Y_RNA.443-201ENST00000384135 111 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-800P-201ENST00000384473 103 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 MTND4LP1-201ENST00000446263 157 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 SNORA62.5-201ENST00000516634 120 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 MIR4514-201ENST00000581410 57 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 MIR6755-201ENST00000619993 66 ntBASIC0.62□□□□□ -2.31
PTPN22Q9Y2R2 SNORA25.4-201ENST00000363666 124 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-645P-201ENST00000364649 106 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 SNORA63.6-201ENST00000364921 119 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 SNORA15B-2-201ENST00000384058 135 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 SNORA15B-1-201ENST00000384334 135 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 RNA5SP63-201ENST00000391225 112 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 AC244090.1-201ENST00000441884 93 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-982P-201ENST00000516216 102 ntBASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.61□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-1162P-201ENST00000384443 104 ntBASIC0.6□□□□□ -2.31
PTPN22Q9Y2R2 MIR521-2-201ENST00000384818 87 ntBASIC0.6□□□□□ -2.31
PTPN22Q9Y2R2 MIR548E-201ENST00000408287 88 ntBASIC0.6□□□□□ -2.31
PTPN22Q9Y2R2 AC005520.4-201ENST00000604337 90 ntBASIC0.6□□□□□ -2.31
PTPN22Q9Y2R2 MIR20A-201ENST00000362279 71 ntBASIC0.59□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-630P-201ENST00000391258 106 ntBASIC0.59□□□□□ -2.31
PTPN22Q9Y2R2 RNU6-656P-201ENST00000516785 107 ntBASIC0.59□□□□□ -2.31
PTPN22Q9Y2R2 MIR548AD-201ENST00000584780 82 ntBASIC0.59□□□□□ -2.31
PTPN22Q9Y2R2 MIR582-201ENST00000365731 98 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 AC021146.9-201ENST00000512503 156 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 RNA5SP147-201ENST00000516493 109 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 MIR4677-201ENST00000584153 80 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PTPN22Q9Y2R2 SNORD44.1-201ENST00000363202 61 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 RNU6-668P-201ENST00000364180 107 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 SNORD114-29-201ENST00000364819 70 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 RNU6-471P-201ENST00000383944 106 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 MIR501-201ENST00000390204 84 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 SNORD2-201ENST00000459163 69 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 RNU6-1232P-201ENST00000516299 86 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 AC023932.2-201ENST00000603176 175 ntBASIC0.57□□□□□ -2.32
PTPN22Q9Y2R2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
PTPN22Q9Y2R2 RNA5SP128-201ENST00000365305 116 ntBASIC0.56□□□□□ -2.32
PTPN22Q9Y2R2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms