Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 RNU6-175P-201ENST00000516896 107 ntBASIC0.1□□□□□ -2.39
VPS4AQ9UN37 MIR20A-201ENST00000362279 71 ntBASIC0.09□□□□□ -2.4
VPS4AQ9UN37 Y_RNA.73-201ENST00000362910 113 ntBASIC0.09□□□□□ -2.4
VPS4AQ9UN37 Y_RNA.264-201ENST00000364665 102 ntBASIC0.09□□□□□ -2.4
VPS4AQ9UN37 RNU7-171P-201ENST00000459581 62 ntBASIC0.09□□□□□ -2.4
VPS4AQ9UN37 RNU6-208P-201ENST00000362431 107 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 Y_RNA.426-201ENST00000384068 113 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 RNU6-820P-201ENST00000384273 107 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 MIR145-201ENST00000384967 88 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 AL450471.1-201ENST00000447509 127 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 AC006254.2-201ENST00000603259 279 ntBASIC0.08□□□□□ -2.4
VPS4AQ9UN37 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.08□□□□□ -2.4
VPS4AQ9UN37 snoU13.19-201ENST00000459148 104 ntBASIC0.07□□□□□ -2.4
VPS4AQ9UN37 RNU6-762P-201ENST00000517107 102 ntBASIC0.07□□□□□ -2.4
VPS4AQ9UN37 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
VPS4AQ9UN37 RNU6-340P-201ENST00000364005 107 ntBASIC0.06□□□□□ -2.4
VPS4AQ9UN37 RNU7-165P-201ENST00000458864 60 ntBASIC0.06□□□□□ -2.4
VPS4AQ9UN37 CR383656.4-201ENST00000546909 122 ntBASIC0.06□□□□□ -2.4
VPS4AQ9UN37 AL627230.5-201ENST00000619807 58 ntBASIC0.06□□□□□ -2.4
VPS4AQ9UN37 RNU6-478P-201ENST00000363904 110 ntBASIC0.05□□□□□ -2.4
VPS4AQ9UN37 RNU6-1152P-201ENST00000384576 107 ntBASIC0.05□□□□□ -2.4
VPS4AQ9UN37 MIR548E-201ENST00000408287 88 ntBASIC0.05□□□□□ -2.4
VPS4AQ9UN37 AC022137.1-201ENST00000483735 151 ntBASIC0.05□□□□□ -2.4
VPS4AQ9UN37 YWHAEP3-201ENST00000582767 121 ntBASIC0.05□□□□□ -2.4
VPS4AQ9UN37 MIR494-201ENST00000349529 81 ntBASIC0.04□□□□□ -2.4
VPS4AQ9UN37 MIR593-201ENST00000384856 100 ntBASIC0.04□□□□□ -2.4
VPS4AQ9UN37 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.04□□□□□ -2.4
VPS4AQ9UN37 SNORA40.17-201ENST00000517256 115 ntBASIC0.04□□□□□ -2.4
VPS4AQ9UN37 AC062037.1-201ENST00000605302 128 ntBASIC0.04□□□□□ -2.4
VPS4AQ9UN37 MIR582-201ENST00000365731 98 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 RNU6-1039P-201ENST00000383931 107 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 Z95118.1-201ENST00000421372 247 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 RNU6-1108P-201ENST00000516308 104 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 IGLVI-20-201ENST00000519296 130 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
VPS4AQ9UN37 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
VPS4AQ9UN37 MIR148A-201ENST00000362215 68 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 MIRLET7A1-201ENST00000362295 80 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 SNORD73B-201ENST00000364394 72 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 RNU6-686P-201ENST00000364839 107 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 RNU6-30P-201ENST00000384561 107 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 RNU6-129P-201ENST00000391022 107 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 RNA5SP163-201ENST00000410304 99 ntBASIC0.02□□□□□ -2.41
VPS4AQ9UN37 Y_RNA.12-201ENST00000362393 112 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-302P-201ENST00000365249 107 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 SNORA49-201ENST00000386157 136 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-274P-201ENST00000459566 107 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-752P-201ENST00000516376 102 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 MIR6514-201ENST00000622549 70 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 MIR4773-1-201ENST00000637203 78 ntBASIC0.01□□□□□ -2.41
VPS4AQ9UN37 SNORD114-5-201ENST00000362928 70 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 RNU6-681P-201ENST00000364012 104 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 Y_RNA.316-201ENST00000365118 111 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 Y_RNA.371-201ENST00000365591 113 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 SNORD2-201ENST00000459163 69 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 MIR4666B-201ENST00000578142 81 ntBASIC0□□□□□ -2.41
VPS4AQ9UN37 RNU6-315P-201ENST00000362666 107 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-990P-201ENST00000364385 104 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-260P-201ENST00000384092 107 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 AC074348.1-201ENST00000426503 132 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNU7-159P-201ENST00000459284 62 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNU6-758P-201ENST00000516292 89 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.01□□□□□ -2.41
VPS4AQ9UN37 RNA5SP25-201ENST00000410815 110 ntBASIC-0.02□□□□□ -2.41
VPS4AQ9UN37 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.02□□□□□ -2.41
VPS4AQ9UN37 RNU6-303P-201ENST00000517091 106 ntBASIC-0.02□□□□□ -2.41
VPS4AQ9UN37 AC145423.2-201ENST00000610631 239 ntBASIC-0.02□□□□□ -2.41
VPS4AQ9UN37 RNA5SP368-201ENST00000364298 116 ntBASIC-0.03□□□□□ -2.41
VPS4AQ9UN37 RNU6-787P-201ENST00000384032 107 ntBASIC-0.03□□□□□ -2.41
VPS4AQ9UN37 RNU6-242P-201ENST00000384359 107 ntBASIC-0.03□□□□□ -2.41
VPS4AQ9UN37 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
VPS4AQ9UN37 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.04□□□□□ -2.42
VPS4AQ9UN37 AL691482.2-201ENST00000457453 84 ntBASIC-0.04□□□□□ -2.42
VPS4AQ9UN37 MIR6507-201ENST00000613630 70 ntBASIC-0.04□□□□□ -2.42
VPS4AQ9UN37 MIR6509-201ENST00000614603 85 ntBASIC-0.04□□□□□ -2.42
VPS4AQ9UN37 MIR1245B-201ENST00000636115 69 ntBASIC-0.04□□□□□ -2.42
VPS4AQ9UN37 SNORA2.1-201ENST00000363089 137 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 SNORA63.6-201ENST00000364921 119 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 MIR1302-4-201ENST00000408701 150 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 RNY4P29-201ENST00000410801 97 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 MIR3657-201ENST00000584818 117 ntBASIC-0.05□□□□□ -2.42
VPS4AQ9UN37 AC104692.1-201ENST00000472406 90 ntBASIC-0.06□□□□□ -2.42
VPS4AQ9UN37 MIR4493-201ENST00000584016 73 ntBASIC-0.06□□□□□ -2.42
VPS4AQ9UN37 AP001180.6-201ENST00000584918 159 ntBASIC-0.06□□□□□ -2.42
VPS4AQ9UN37 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.06□□□□□ -2.42
VPS4AQ9UN37 MIR4679-1-201ENST00000637619 75 ntBASIC-0.06□□□□□ -2.42
VPS4AQ9UN37 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.07□□□□□ -2.42
VPS4AQ9UN37 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
VPS4AQ9UN37 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.07□□□□□ -2.42
VPS4AQ9UN37 RNU6-929P-201ENST00000384429 107 ntBASIC-0.07□□□□□ -2.42
VPS4AQ9UN37 MIR655-201ENST00000362159 97 ntBASIC-0.08□□□□□ -2.42
VPS4AQ9UN37 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
VPS4AQ9UN37 MIR4712-201ENST00000583750 82 ntBASIC-0.08□□□□□ -2.42
VPS4AQ9UN37 MIR1295B-201ENST00000636144 60 ntBASIC-0.08□□□□□ -2.42
VPS4AQ9UN37 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms