Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU7-24P-201ENST00000458867 62 ntBASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 RNU7-61P-201ENST00000515897 61 ntBASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 MIR3133-201ENST00000583157 78 ntBASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.89□□□□□ -2.55
TM9SF3Q9HD45 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.9□□□□□ -2.55
TM9SF3Q9HD45 MIR590-201ENST00000385008 97 ntBASIC-0.9□□□□□ -2.55
TM9SF3Q9HD45 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.9□□□□□ -2.55
TM9SF3Q9HD45 SNORD114-25-201ENST00000363742 72 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 MIR124-2-201ENST00000385081 109 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 RNU6-972P-201ENST00000391208 107 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 SNORA13-201ENST00000458790 133 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 RNU6-162P-201ENST00000516228 103 ntBASIC-0.91□□□□□ -2.56
TM9SF3Q9HD45 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 RNA5SP266-201ENST00000410273 108 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 RNU6-109P-201ENST00000516364 107 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 RNU6-184P-201ENST00000516514 107 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 MIR6509-201ENST00000614603 85 ntBASIC-0.92□□□□□ -2.56
TM9SF3Q9HD45 RNU6-260P-201ENST00000384092 107 ntBASIC-0.93□□□□□ -2.56
TM9SF3Q9HD45 RNU6-412P-201ENST00000516434 106 ntBASIC-0.93□□□□□ -2.56
TM9SF3Q9HD45 RNU6-537P-201ENST00000517277 103 ntBASIC-0.93□□□□□ -2.56
TM9SF3Q9HD45 AC006254.2-201ENST00000603259 279 ntBASIC-0.93□□□□□ -2.56
TM9SF3Q9HD45 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.93□□□□□ -2.56
TM9SF3Q9HD45 RNU6-208P-201ENST00000362431 107 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 RNU5F-1-201ENST00000362507 117 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 SNORA33.1-201ENST00000364957 130 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 RNU6-209P-201ENST00000384118 107 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 SNORD83B-201ENST00000386745 93 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 MIR4796-201ENST00000580742 81 ntBASIC-0.94□□□□□ -2.56
TM9SF3Q9HD45 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.95□□□□□ -2.56
TM9SF3Q9HD45 RNU7-153P-201ENST00000516455 62 ntBASIC-0.95□□□□□ -2.56
TM9SF3Q9HD45 YWHAEP3-201ENST00000582767 121 ntBASIC-0.95□□□□□ -2.56
TM9SF3Q9HD45 MIR3657-201ENST00000584818 117 ntBASIC-0.95□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.96□□□□□ -2.56
TM9SF3Q9HD45 SNORA19-201ENST00000384737 128 ntBASIC-0.96□□□□□ -2.56
TM9SF3Q9HD45 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.96□□□□□ -2.56
TM9SF3Q9HD45 AL353803.5-201ENST00000599815 141 ntBASIC-0.96□□□□□ -2.56
TM9SF3Q9HD45 SNORD116-10-201ENST00000363791 102 ntBASIC-0.97□□□□□ -2.56
TM9SF3Q9HD45 RNU6-554P-201ENST00000410466 106 ntBASIC-0.97□□□□□ -2.56
TM9SF3Q9HD45 AL691482.2-201ENST00000457453 84 ntBASIC-0.97□□□□□ -2.56
TM9SF3Q9HD45 SCARNA17-201ENST00000516183 144 ntBASIC-0.97□□□□□ -2.56
TM9SF3Q9HD45 MIR4464-201ENST00000580818 92 ntBASIC-0.97□□□□□ -2.56
TM9SF3Q9HD45 RNU6-704P-201ENST00000364162 103 ntBASIC-0.98□□□□□ -2.57
TM9SF3Q9HD45 SNORD74.6-201ENST00000364796 70 ntBASIC-0.98□□□□□ -2.57
TM9SF3Q9HD45 U7.3-201ENST00000616123 62 ntBASIC-0.98□□□□□ -2.57
TM9SF3Q9HD45 MIR1302-5-201ENST00000408164 150 ntBASIC-0.99□□□□□ -2.57
TM9SF3Q9HD45 MIR1255B2-201ENST00000408618 67 ntBASIC-0.99□□□□□ -2.57
TM9SF3Q9HD45 MIR6129-201ENST00000616087 109 ntBASIC-0.99□□□□□ -2.57
TM9SF3Q9HD45 MIR6888-201ENST00000621977 67 ntBASIC-0.99□□□□□ -2.57
TM9SF3Q9HD45 SNORA2.1-201ENST00000363089 137 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 Y_RNA.107-201ENST00000363190 121 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 SNORD115-27-201ENST00000364430 82 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 RNU6-106P-201ENST00000384405 107 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 SNORD57-201ENST00000448188 72 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 RNU6-274P-201ENST00000459566 107 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 RNY1P9-201ENST00000532431 109 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 U6.81-201ENST00000612550 106 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 AL365222.1-201ENST00000614661 98 ntBASIC-1□□□□□ -2.57
TM9SF3Q9HD45 SNORD114-17-201ENST00000364699 75 ntBASIC-1.01□□□□□ -2.57
TM9SF3Q9HD45 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.01□□□□□ -2.57
TM9SF3Q9HD45 RNU6-959P-201ENST00000384671 107 ntBASIC-1.01□□□□□ -2.57
TM9SF3Q9HD45 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.01□□□□□ -2.57
TM9SF3Q9HD45 AL500527.2-201ENST00000454105 95 ntBASIC-1.01□□□□□ -2.57
TM9SF3Q9HD45 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 SNORA62.4-201ENST00000365504 151 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 RNU6-431P-201ENST00000383874 107 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 MIR1236-201ENST00000408340 102 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 CYP3A54P-201ENST00000566950 75 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 MIR4324-201ENST00000584846 72 ntBASIC-1.02□□□□□ -2.57
TM9SF3Q9HD45 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 SNORD64-201ENST00000386683 67 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 AL445584.3-201ENST00000617173 78 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 MIR6738-201ENST00000619620 64 ntBASIC-1.03□□□□□ -2.57
TM9SF3Q9HD45 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.05□□□□□ -2.58
TM9SF3Q9HD45 MT-TR-201ENST00000387439 65 ntBASIC-1.05□□□□□ -2.58
TM9SF3Q9HD45 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.05□□□□□ -2.58
TM9SF3Q9HD45 MIR587-201ENST00000384845 96 ntBASIC-1.06□□□□□ -2.58
TM9SF3Q9HD45 AL450471.1-201ENST00000447509 127 ntBASIC-1.06□□□□□ -2.58
TM9SF3Q9HD45 RNA5SP470-201ENST00000516463 106 ntBASIC-1.06□□□□□ -2.58
TM9SF3Q9HD45 MIR4499-201ENST00000584834 69 ntBASIC-1.06□□□□□ -2.58
TM9SF3Q9HD45 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 RNU6-746P-201ENST00000384112 109 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 AC008267.6-201ENST00000441664 139 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 MIR3671-201ENST00000580455 88 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 uc_338.19-201ENST00000616808 99 ntBASIC-1.07□□□□□ -2.58
TM9SF3Q9HD45 RNU6-10P-201ENST00000384036 107 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms