Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
ZFYVE28Q9HCC9 SNORA2A-201ENST00000383885 135 ntBASIC0.87□□□□□ -2.27
ZFYVE28Q9HCC9 MIR652-201ENST00000385278 98 ntBASIC0.87□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6-990P-201ENST00000364385 104 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6-663P-201ENST00000391105 106 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6-351P-201ENST00000516097 100 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6-229P-201ENST00000516614 102 ntBASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6-1216P-201ENST00000362590 107 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 RNA5SP193-201ENST00000410353 107 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 MIR4711-201ENST00000578274 70 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 RNU1-29P-201ENST00000606574 126 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 AL109933.3-201ENST00000619095 188 ntBASIC0.85□□□□□ -2.27
ZFYVE28Q9HCC9 RNA5SP347-201ENST00000362445 119 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 AC098934.3-201ENST00000430450 190 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 RNU4-54P-201ENST00000516428 129 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 RNA5SP147-201ENST00000516493 109 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 MIR548AE1-201ENST00000583292 70 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 MIR8087-201ENST00000612745 78 ntBASIC0.84□□□□□ -2.27
ZFYVE28Q9HCC9 RNA5SP257-201ENST00000363023 116 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-848P-201ENST00000515948 107 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-617P-201ENST00000516147 107 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-473P-201ENST00000516164 107 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 RNA5SP121-201ENST00000516537 101 ntBASIC0.83□□□□□ -2.28
ZFYVE28Q9HCC9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-590P-201ENST00000365039 107 ntBASIC0.82□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
ZFYVE28Q9HCC9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.81□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-788P-201ENST00000390967 104 ntBASIC0.81□□□□□ -2.28
ZFYVE28Q9HCC9 MTND4LP1-201ENST00000446263 157 ntBASIC0.81□□□□□ -2.28
ZFYVE28Q9HCC9 U6.111-201ENST00000636093 83 ntBASIC0.81□□□□□ -2.28
ZFYVE28Q9HCC9 MIR330-201ENST00000362196 94 ntBASIC0.8□□□□□ -2.28
ZFYVE28Q9HCC9 SNORA40.17-201ENST00000517256 115 ntBASIC0.8□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-863P-201ENST00000515989 104 ntBASIC0.79□□□□□ -2.28
ZFYVE28Q9HCC9 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
ZFYVE28Q9HCC9 AC243829.3-201ENST00000622177 108 ntBASIC0.79□□□□□ -2.28
ZFYVE28Q9HCC9 MIR6739-201ENST00000622461 75 ntBASIC0.78□□□□□ -2.28
ZFYVE28Q9HCC9 RNA5SP62-201ENST00000363457 110 ntBASIC0.77□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-668P-201ENST00000364180 107 ntBASIC0.77□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-645P-201ENST00000364649 106 ntBASIC0.77□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.77□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-630P-201ENST00000391258 106 ntBASIC0.76□□□□□ -2.29
ZFYVE28Q9HCC9 snoU13.13-201ENST00000458842 104 ntBASIC0.76□□□□□ -2.29
ZFYVE28Q9HCC9 HAR1A.1-201ENST00000459583 118 ntBASIC0.76□□□□□ -2.29
ZFYVE28Q9HCC9 AC021146.9-201ENST00000512503 156 ntBASIC0.76□□□□□ -2.29
ZFYVE28Q9HCC9 RNA5SP476-201ENST00000516613 103 ntBASIC0.76□□□□□ -2.29
ZFYVE28Q9HCC9 MIR20A-201ENST00000362279 71 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 SNORA63.6-201ENST00000364921 119 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-800P-201ENST00000384473 103 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 SNORD116-24-201ENST00000384549 92 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 MIR6755-201ENST00000619993 66 ntBASIC0.75□□□□□ -2.29
ZFYVE28Q9HCC9 MIR516B1-201ENST00000385211 90 ntBASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 MIR760-201ENST00000390220 80 ntBASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 MIR1197-201ENST00000408818 88 ntBASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 AC244090.1-201ENST00000441884 93 ntBASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.74□□□□□ -2.29
ZFYVE28Q9HCC9 SNORD44.1-201ENST00000363202 61 ntBASIC0.73□□□□□ -2.29
ZFYVE28Q9HCC9 Y_RNA.443-201ENST00000384135 111 ntBASIC0.73□□□□□ -2.29
ZFYVE28Q9HCC9 MIR521-2-201ENST00000384818 87 ntBASIC0.73□□□□□ -2.29
ZFYVE28Q9HCC9 MIR5087-201ENST00000635826 76 ntBASIC0.73□□□□□ -2.29
ZFYVE28Q9HCC9 SNORD114-29-201ENST00000364819 70 ntBASIC0.72□□□□□ -2.29
ZFYVE28Q9HCC9 MIR548E-201ENST00000408287 88 ntBASIC0.72□□□□□ -2.29
ZFYVE28Q9HCC9 SNORA25.4-201ENST00000363666 124 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 RNA5SP128-201ENST00000365305 116 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 MIR582-201ENST00000365731 98 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 RNU6-35P-201ENST00000384530 107 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 RNU6-656P-201ENST00000516785 107 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.71□□□□□ -2.3
ZFYVE28Q9HCC9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
ZFYVE28Q9HCC9 Y_RNA.633-201ENST00000459107 95 ntBASIC0.7□□□□□ -2.3
ZFYVE28Q9HCC9 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
ZFYVE28Q9HCC9 AC005520.4-201ENST00000604337 90 ntBASIC0.7□□□□□ -2.3
ZFYVE28Q9HCC9 MIR501-201ENST00000390204 84 ntBASIC0.69□□□□□ -2.3
ZFYVE28Q9HCC9 SNORD2-201ENST00000459163 69 ntBASIC0.69□□□□□ -2.3
ZFYVE28Q9HCC9 AC125388.1-201ENST00000459631 156 ntBASIC0.69□□□□□ -2.3
ZFYVE28Q9HCC9 MIR548AD-201ENST00000584780 82 ntBASIC0.69□□□□□ -2.3
ZFYVE28Q9HCC9 AC084368.1-201ENST00000620935 65 ntBASIC0.69□□□□□ -2.3
ZFYVE28Q9HCC9 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
ZFYVE28Q9HCC9 Y_RNA.386-201ENST00000383913 105 ntBASIC0.67□□□□□ -2.3
ZFYVE28Q9HCC9 RNU7-188P-201ENST00000517063 64 ntBASIC0.67□□□□□ -2.3
ZFYVE28Q9HCC9 Y_RNA.340-201ENST00000365330 92 ntBASIC0.66□□□□□ -2.3
ZFYVE28Q9HCC9 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
ZFYVE28Q9HCC9 RNU7-129P-201ENST00000516128 62 ntBASIC0.66□□□□□ -2.3
ZFYVE28Q9HCC9 SNORA68.3-201ENST00000515906 83 ntBASIC0.65□□□□□ -2.31
ZFYVE28Q9HCC9 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
ZFYVE28Q9HCC9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.64□□□□□ -2.31
ZFYVE28Q9HCC9 U6.96-201ENST00000636425 70 ntBASIC0.64□□□□□ -2.31
ZFYVE28Q9HCC9 SNORA33.1-201ENST00000364957 130 ntBASIC0.63□□□□□ -2.31
ZFYVE28Q9HCC9 AL157398.1-201ENST00000452981 186 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 255.8 ms