Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AL157398.1-201ENST00000452981 186 ntBASIC1.2□□□□□ -2.22
EFCC1Q9HA90 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
EFCC1Q9HA90 MIR6739-201ENST00000622461 75 ntBASIC1.2□□□□□ -2.22
EFCC1Q9HA90 RNA5SP457-201ENST00000363657 124 ntBASIC1.19□□□□□ -2.22
EFCC1Q9HA90 SNORA70.25-201ENST00000612741 95 ntBASIC1.19□□□□□ -2.22
EFCC1Q9HA90 MIR6857-201ENST00000613267 93 ntBASIC1.19□□□□□ -2.22
EFCC1Q9HA90 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.18□□□□□ -2.22
EFCC1Q9HA90 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
EFCC1Q9HA90 AL590095.2-201ENST00000604136 117 ntBASIC1.18□□□□□ -2.22
EFCC1Q9HA90 SNORA25.5-201ENST00000363782 126 ntBASIC1.17□□□□□ -2.22
EFCC1Q9HA90 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
EFCC1Q9HA90 MIR630-201ENST00000384957 97 ntBASIC1.16□□□□□ -2.22
EFCC1Q9HA90 MIR532-201ENST00000385025 91 ntBASIC1.16□□□□□ -2.22
EFCC1Q9HA90 SCARNA17.3-201ENST00000516381 125 ntBASIC1.16□□□□□ -2.22
EFCC1Q9HA90 RNU4-38P-201ENST00000364472 129 ntBASIC1.15□□□□□ -2.23
EFCC1Q9HA90 SNORA33.1-201ENST00000364957 130 ntBASIC1.15□□□□□ -2.23
EFCC1Q9HA90 MIR521-2-201ENST00000384818 87 ntBASIC1.15□□□□□ -2.23
EFCC1Q9HA90 MIR466-201ENST00000580653 84 ntBASIC1.15□□□□□ -2.23
EFCC1Q9HA90 AL353765.1-201ENST00000605514 183 ntBASIC1.15□□□□□ -2.23
EFCC1Q9HA90 Y_RNA.68-201ENST00000362881 102 ntBASIC1.14□□□□□ -2.23
EFCC1Q9HA90 MIR582-201ENST00000365731 98 ntBASIC1.14□□□□□ -2.23
EFCC1Q9HA90 AC069271.1-201ENST00000445577 156 ntBASIC1.14□□□□□ -2.23
EFCC1Q9HA90 SCARNA21.1-201ENST00000515996 128 ntBASIC1.14□□□□□ -2.23
EFCC1Q9HA90 SNORA25.18-201ENST00000607153 114 ntBASIC1.14□□□□□ -2.23
EFCC1Q9HA90 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
EFCC1Q9HA90 RNU6-1079P-201ENST00000362861 110 ntBASIC1.13□□□□□ -2.23
EFCC1Q9HA90 Y_RNA.115-201ENST00000363272 98 ntBASIC1.13□□□□□ -2.23
EFCC1Q9HA90 RNA5SP215-201ENST00000363440 122 ntBASIC1.13□□□□□ -2.23
EFCC1Q9HA90 RNA5SP517-201ENST00000364724 117 ntBASIC1.12□□□□□ -2.23
EFCC1Q9HA90 RNU4-45P-201ENST00000365469 141 ntBASIC1.12□□□□□ -2.23
EFCC1Q9HA90 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.12□□□□□ -2.23
EFCC1Q9HA90 uc_338.10-201ENST00000621872 182 ntBASIC1.12□□□□□ -2.23
EFCC1Q9HA90 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.12□□□□□ -2.23
EFCC1Q9HA90 Y_RNA.250-201ENST00000364542 110 ntBASIC1.11□□□□□ -2.23
EFCC1Q9HA90 SNORA63.6-201ENST00000364921 119 ntBASIC1.11□□□□□ -2.23
EFCC1Q9HA90 SNORA75.1-201ENST00000391130 148 ntBASIC1.11□□□□□ -2.23
EFCC1Q9HA90 RPL39P28-201ENST00000465655 155 ntBASIC1.11□□□□□ -2.23
EFCC1Q9HA90 MIR548E-201ENST00000408287 88 ntBASIC1.1□□□□□ -2.23
EFCC1Q9HA90 ACA64.5-201ENST00000516207 127 ntBASIC1.1□□□□□ -2.23
EFCC1Q9HA90 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
EFCC1Q9HA90 MIR4714-201ENST00000580728 77 ntBASIC1.1□□□□□ -2.23
EFCC1Q9HA90 RNU6-987P-201ENST00000384759 104 ntBASIC1.09□□□□□ -2.23
EFCC1Q9HA90 RNU4-37P-201ENST00000410214 84 ntBASIC1.09□□□□□ -2.23
EFCC1Q9HA90 U6.96-201ENST00000636425 70 ntBASIC1.09□□□□□ -2.23
EFCC1Q9HA90 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.09□□□□□ -2.24
EFCC1Q9HA90 Y_RNA.125-201ENST00000363371 111 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 RNU6-302P-201ENST00000365249 107 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 Y_RNA.423-201ENST00000384057 113 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 SNORA15B-2-201ENST00000384058 135 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 SNORA15B-1-201ENST00000384334 135 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 RNU6-614P-201ENST00000384369 107 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 U6.59-201ENST00000615686 107 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 MIR6513-201ENST00000621188 64 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 MIR924-201ENST00000638017 53 ntBASIC1.08□□□□□ -2.24
EFCC1Q9HA90 RNU6-940P-201ENST00000363433 104 ntBASIC1.07□□□□□ -2.24
EFCC1Q9HA90 MIR517B-201ENST00000385102 67 ntBASIC1.07□□□□□ -2.24
EFCC1Q9HA90 MIR140-201ENST00000385282 100 ntBASIC1.07□□□□□ -2.24
EFCC1Q9HA90 RNU6-669P-201ENST00000365575 107 ntBASIC1.06□□□□□ -2.24
EFCC1Q9HA90 HMGN2P22-201ENST00000427588 175 ntBASIC1.06□□□□□ -2.24
EFCC1Q9HA90 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
EFCC1Q9HA90 U2.7-201ENST00000619197 100 ntBASIC1.06□□□□□ -2.24
EFCC1Q9HA90 SNORD114-23-201ENST00000363536 72 ntBASIC1.05□□□□□ -2.24
EFCC1Q9HA90 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
EFCC1Q9HA90 AC079150.2-201ENST00000443733 78 ntBASIC1.05□□□□□ -2.24
EFCC1Q9HA90 RNA5SP330-201ENST00000517096 96 ntBASIC1.05□□□□□ -2.24
EFCC1Q9HA90 AC010487.4-201ENST00000637027 61 ntBASIC1.05□□□□□ -2.24
EFCC1Q9HA90 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
EFCC1Q9HA90 MIR936-201ENST00000401264 98 ntBASIC1.04□□□□□ -2.24
EFCC1Q9HA90 Y_RNA.633-201ENST00000459107 95 ntBASIC1.04□□□□□ -2.24
EFCC1Q9HA90 RNU6-229P-201ENST00000516614 102 ntBASIC1.04□□□□□ -2.24
EFCC1Q9HA90 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
EFCC1Q9HA90 RNU4-54P-201ENST00000516428 129 ntBASIC1.03□□□□□ -2.24
EFCC1Q9HA90 RNU6-829P-201ENST00000363700 112 ntBASIC1.02□□□□□ -2.25
EFCC1Q9HA90 MIR608-201ENST00000384820 100 ntBASIC1.02□□□□□ -2.25
EFCC1Q9HA90 SNORD113-2-201ENST00000391082 72 ntBASIC1.02□□□□□ -2.25
EFCC1Q9HA90 RNU6-1232P-201ENST00000516299 86 ntBASIC1.02□□□□□ -2.25
EFCC1Q9HA90 MIR5706-201ENST00000579841 80 ntBASIC1.02□□□□□ -2.25
EFCC1Q9HA90 MIR146A-201ENST00000385201 99 ntBASIC1.01□□□□□ -2.25
EFCC1Q9HA90 MIR516B1-201ENST00000385211 90 ntBASIC1.01□□□□□ -2.25
EFCC1Q9HA90 CYP3A54P-201ENST00000566950 75 ntBASIC1.01□□□□□ -2.25
EFCC1Q9HA90 RNU1-29P-201ENST00000606574 126 ntBASIC1.01□□□□□ -2.25
EFCC1Q9HA90 SNORA9.1-201ENST00000362412 131 ntBASIC1□□□□□ -2.25
EFCC1Q9HA90 RNU7-174P-201ENST00000516248 59 ntBASIC1□□□□□ -2.25
EFCC1Q9HA90 AC243829.6-201ENST00000612652 106 ntBASIC1□□□□□ -2.25
EFCC1Q9HA90 SNORD60.1-201ENST00000362451 73 ntBASIC0.99□□□□□ -2.25
EFCC1Q9HA90 SNORA2A-201ENST00000383885 135 ntBASIC0.99□□□□□ -2.25
EFCC1Q9HA90 SNORA40.8-201ENST00000411034 126 ntBASIC0.99□□□□□ -2.25
EFCC1Q9HA90 SNORD71-201ENST00000411292 86 ntBASIC0.99□□□□□ -2.25
EFCC1Q9HA90 AC090617.8-201ENST00000623339 167 ntBASIC0.99□□□□□ -2.25
EFCC1Q9HA90 RNA5SP257-201ENST00000363023 116 ntBASIC0.98□□□□□ -2.25
EFCC1Q9HA90 RNU6-698P-201ENST00000363523 107 ntBASIC0.98□□□□□ -2.25
EFCC1Q9HA90 RNU6-34P-201ENST00000364874 107 ntBASIC0.98□□□□□ -2.25
EFCC1Q9HA90 RNA5SP121-201ENST00000516537 101 ntBASIC0.98□□□□□ -2.25
EFCC1Q9HA90 U4.4-201ENST00000620626 117 ntBASIC0.98□□□□□ -2.25
EFCC1Q9HA90 MIR20A-201ENST00000362279 71 ntBASIC0.97□□□□□ -2.25
EFCC1Q9HA90 RNU6-122P-201ENST00000516818 107 ntBASIC0.97□□□□□ -2.25
EFCC1Q9HA90 RNU7-188P-201ENST00000517063 64 ntBASIC0.97□□□□□ -2.25
EFCC1Q9HA90 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
EFCC1Q9HA90 SNORD118-201ENST00000363593 134 ntBASIC0.96□□□□□ -2.26
EFCC1Q9HA90 RNU6-518P-201ENST00000516056 96 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms