Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 MIR216B-201ENST00000390186 82 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 RNU6-279P-201ENST00000391297 101 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 SNORD75.2-201ENST00000408784 58 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 Y_RNA.685-201ENST00000516532 108 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 MIR3925-201ENST00000584674 77 ntBASIC0.36□□□□□ -2.35
CDT1Q9H211 MIR582-201ENST00000365731 98 ntBASIC0.35□□□□□ -2.35
CDT1Q9H211 RNU7-24P-201ENST00000458867 62 ntBASIC0.35□□□□□ -2.35
CDT1Q9H211 Y_RNA.660-201ENST00000516002 120 ntBASIC0.35□□□□□ -2.35
CDT1Q9H211 MIR4677-201ENST00000584153 80 ntBASIC0.35□□□□□ -2.35
CDT1Q9H211 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
CDT1Q9H211 RNU6-303P-201ENST00000517091 106 ntBASIC0.34□□□□□ -2.36
CDT1Q9H211 AC090625.1-201ENST00000357130 210 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 RNA5SP128-201ENST00000365305 116 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 RNU6-1039P-201ENST00000383931 107 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 Y_RNA.407-201ENST00000383986 113 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 MIR548AD-201ENST00000584780 82 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 AL627230.5-201ENST00000619807 58 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 uc_338.10-201ENST00000621872 182 ntBASIC0.33□□□□□ -2.36
CDT1Q9H211 MIR516B1-201ENST00000385211 90 ntBASIC0.32□□□□□ -2.36
CDT1Q9H211 RNA5SP299-201ENST00000391203 116 ntBASIC0.32□□□□□ -2.36
CDT1Q9H211 MIR889-201ENST00000401280 79 ntBASIC0.32□□□□□ -2.36
CDT1Q9H211 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CDT1Q9H211 RNU6-1094P-201ENST00000362416 104 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 Y_RNA.244-201ENST00000364484 109 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-127P-201ENST00000390897 107 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 AL691482.2-201ENST00000457453 84 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 snoU13.13-201ENST00000458842 104 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-848P-201ENST00000515948 107 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-617P-201ENST00000516147 107 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-473P-201ENST00000516164 107 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-1049P-201ENST00000516414 107 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 MIR3134-201ENST00000579433 74 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 MIR6509-201ENST00000614603 85 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 MIR6759-201ENST00000638110 65 ntBASIC0.31□□□□□ -2.36
CDT1Q9H211 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 RNU6-260P-201ENST00000384092 107 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 RNU6-24P-201ENST00000384440 107 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 AC073261.1-201ENST00000429409 121 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 SCARNA17.3-201ENST00000516381 125 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 RN7SL660P-201ENST00000614852 299 ntBASIC0.3□□□□□ -2.36
CDT1Q9H211 MIR548E-201ENST00000408287 88 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 MIR548H2-201ENST00000408874 88 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 RNA5SP147-201ENST00000516493 109 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 RNU6-175P-201ENST00000516896 107 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 RNU7-188P-201ENST00000517063 64 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 MIR3657-201ENST00000584818 117 ntBASIC0.29□□□□□ -2.36
CDT1Q9H211 MIR643-201ENST00000385267 97 ntBASIC0.28□□□□□ -2.36
CDT1Q9H211 RNU6-274P-201ENST00000459566 107 ntBASIC0.28□□□□□ -2.36
CDT1Q9H211 RNU6-681P-201ENST00000364012 104 ntBASIC0.27□□□□□ -2.37
CDT1Q9H211 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.27□□□□□ -2.37
CDT1Q9H211 RNU6-523P-201ENST00000516304 54 ntBASIC0.27□□□□□ -2.37
CDT1Q9H211 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
CDT1Q9H211 MIR4636-201ENST00000582271 80 ntBASIC0.27□□□□□ -2.37
CDT1Q9H211 MIR3675-201ENST00000583661 73 ntBASIC0.26□□□□□ -2.37
CDT1Q9H211 AC084368.1-201ENST00000620935 65 ntBASIC0.26□□□□□ -2.37
CDT1Q9H211 SNORA9.1-201ENST00000362412 131 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 SNORA8.1-201ENST00000384250 140 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 SNORA49-201ENST00000386157 136 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 snoU13.19-201ENST00000459148 104 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 AC145423.2-201ENST00000610631 239 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 U7.6-201ENST00000610841 64 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.25□□□□□ -2.37
CDT1Q9H211 RNU6-70P-201ENST00000516438 60 ntBASIC0.24□□□□□ -2.37
CDT1Q9H211 RNU6-807P-201ENST00000516805 107 ntBASIC0.24□□□□□ -2.37
CDT1Q9H211 U7.4-201ENST00000614961 63 ntBASIC0.24□□□□□ -2.37
CDT1Q9H211 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.24□□□□□ -2.37
CDT1Q9H211 MIR1297-201ENST00000637311 77 ntBASIC0.24□□□□□ -2.37
CDT1Q9H211 SNORD45.1-201ENST00000363181 77 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 SNORD114-4-201ENST00000363962 75 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 MIR106A-201ENST00000384870 81 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 Y_RNA.633-201ENST00000459107 95 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 RNU6-638P-201ENST00000516582 104 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 RNU6-782P-201ENST00000516852 104 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 MIR6718-201ENST00000616153 80 ntBASIC0.23□□□□□ -2.37
CDT1Q9H211 RNA5SP98-201ENST00000363158 137 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 Y_RNA.185-201ENST00000363894 100 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 SNORD115-22-201ENST00000364456 82 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
CDT1Q9H211 MIR876-201ENST00000401147 81 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 RNU6-982P-201ENST00000516216 102 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 RNU6-752P-201ENST00000516376 102 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 RNU6-687P-201ENST00000516443 89 ntBASIC0.22□□□□□ -2.37
CDT1Q9H211 MIR20A-201ENST00000362279 71 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 RNU6-380P-201ENST00000410207 107 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 Z95118.1-201ENST00000421372 247 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 AC090617.8-201ENST00000623339 167 ntBASIC0.21□□□□□ -2.38
CDT1Q9H211 RNU6-776P-201ENST00000364403 104 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 RNU6-1022P-201ENST00000365049 104 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 SNORD115-31-201ENST00000365318 82 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 RNU6-1036P-201ENST00000383959 104 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 RNU6-604P-201ENST00000390917 100 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 AC244090.1-201ENST00000441884 93 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CDT1Q9H211 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms