Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MIR548AE1-201ENST00000583292 70 ntBASIC1.62□□□□□ -2.15
CNTNAP3BQ96NU0 MIR6078-201ENST00000611069 100 ntBASIC1.62□□□□□ -2.15
CNTNAP3BQ96NU0 SNORD114-27-201ENST00000363766 70 ntBASIC1.6□□□□□ -2.15
CNTNAP3BQ96NU0 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-518P-201ENST00000516056 96 ntBASIC1.6□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-247P-201ENST00000362636 107 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 SNORD1B-201ENST00000363091 84 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 RNU6-246P-201ENST00000384702 107 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 MIR519A2-201ENST00000384990 87 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 MIR527-201ENST00000385244 85 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 SCARNA16.5-201ENST00000517114 183 ntBASIC1.59□□□□□ -2.15
CNTNAP3BQ96NU0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 Y_RNA.115-201ENST00000363272 98 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 MIR516B1-201ENST00000385211 90 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 SNORA67.6-201ENST00000391093 99 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6-172P-201ENST00000411000 93 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 U7.7-201ENST00000459276 60 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 MIR3678-201ENST00000578455 94 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 MIR548AG1-201ENST00000579932 66 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 AC243829.3-201ENST00000622177 108 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 U6.96-201ENST00000636425 70 ntBASIC1.58□□□□□ -2.16
CNTNAP3BQ96NU0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CNTNAP3BQ96NU0 MIR6828-201ENST00000636181 60 ntBASIC1.57□□□□□ -2.16
CNTNAP3BQ96NU0 RNA5SP62-201ENST00000363457 110 ntBASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6-724P-201ENST00000390958 105 ntBASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 FABP5P4-201ENST00000437203 171 ntBASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 AC002429.1-201ENST00000437672 148 ntBASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6-924P-201ENST00000362926 108 ntBASIC1.55□□□□□ -2.16
CNTNAP3BQ96NU0 SNORA16.1-201ENST00000364597 132 ntBASIC1.55□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.55□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6-986P-201ENST00000363133 102 ntBASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 MIR193B-201ENST00000384907 83 ntBASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 MIR1255B2-201ENST00000408618 67 ntBASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 RNU6-1110P-201ENST00000516462 101 ntBASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 MIR1273G-201ENST00000577677 100 ntBASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CNTNAP3BQ96NU0 Y_RNA.109-201ENST00000363215 102 ntBASIC1.53□□□□□ -2.16
CNTNAP3BQ96NU0 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
CNTNAP3BQ96NU0 SNORD105-201ENST00000386910 85 ntBASIC1.53□□□□□ -2.16
CNTNAP3BQ96NU0 AC243829.6-201ENST00000612652 106 ntBASIC1.53□□□□□ -2.16
CNTNAP3BQ96NU0 MIR4419B-201ENST00000577260 68 ntBASIC1.52□□□□□ -2.17
CNTNAP3BQ96NU0 MIR4473-201ENST00000583731 91 ntBASIC1.52□□□□□ -2.17
CNTNAP3BQ96NU0 AL627230.5-201ENST00000619807 58 ntBASIC1.52□□□□□ -2.17
CNTNAP3BQ96NU0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CNTNAP3BQ96NU0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CNTNAP3BQ96NU0 SNORD48-201ENST00000364953 64 ntBASIC1.51□□□□□ -2.17
CNTNAP3BQ96NU0 SNORD89-201ENST00000390981 114 ntBASIC1.51□□□□□ -2.17
CNTNAP3BQ96NU0 AC098934.3-201ENST00000430450 190 ntBASIC1.51□□□□□ -2.17
CNTNAP3BQ96NU0 RNA5SP327-201ENST00000362494 101 ntBASIC1.5□□□□□ -2.17
CNTNAP3BQ96NU0 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
CNTNAP3BQ96NU0 MIR200A-201ENST00000384875 90 ntBASIC1.5□□□□□ -2.17
CNTNAP3BQ96NU0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.5□□□□□ -2.17
CNTNAP3BQ96NU0 RNA5SP257-201ENST00000363023 116 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 MIR19B1-201ENST00000384829 87 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 MIR573-201ENST00000384964 99 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 AC006210.1-201ENST00000424882 111 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 MIR548AL-201ENST00000578416 97 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 MIR3612-201ENST00000579753 87 ntBASIC1.49□□□□□ -2.17
CNTNAP3BQ96NU0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CNTNAP3BQ96NU0 RNU6-337P-201ENST00000391243 106 ntBASIC1.48□□□□□ -2.17
CNTNAP3BQ96NU0 SNORD110-201ENST00000408189 75 ntBASIC1.48□□□□□ -2.17
CNTNAP3BQ96NU0 RNU7-154P-201ENST00000516194 62 ntBASIC1.48□□□□□ -2.17
CNTNAP3BQ96NU0 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
CNTNAP3BQ96NU0 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
CNTNAP3BQ96NU0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.47□□□□□ -2.17
CNTNAP3BQ96NU0 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
CNTNAP3BQ96NU0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 RNU6-696P-201ENST00000390834 107 ntBASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 RNA5SP121-201ENST00000516537 101 ntBASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 RNU7-160P-201ENST00000516660 62 ntBASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 MIR6086-201ENST00000638065 55 ntBASIC1.46□□□□□ -2.18
CNTNAP3BQ96NU0 SNORD115-25-201ENST00000362619 82 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 SNORA36.1-201ENST00000363424 132 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 RNU6-458P-201ENST00000384179 107 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 MIR5000-201ENST00000577717 103 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 AC025627.3-201ENST00000582078 182 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 AL590095.2-201ENST00000604136 117 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 U6.58-201ENST00000613107 107 ntBASIC1.45□□□□□ -2.18
CNTNAP3BQ96NU0 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
CNTNAP3BQ96NU0 AC244090.1-201ENST00000441884 93 ntBASIC1.44□□□□□ -2.18
CNTNAP3BQ96NU0 RNA5SP227-201ENST00000516184 113 ntBASIC1.44□□□□□ -2.18
CNTNAP3BQ96NU0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.44□□□□□ -2.18
CNTNAP3BQ96NU0 SNORA70.25-201ENST00000612741 95 ntBASIC1.43□□□□□ -2.18
CNTNAP3BQ96NU0 MIR20A-201ENST00000362279 71 ntBASIC1.42□□□□□ -2.18
CNTNAP3BQ96NU0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.42□□□□□ -2.18
CNTNAP3BQ96NU0 MIR429-201ENST00000362106 83 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 MIR579-201ENST00000385221 98 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 HMGN2P22-201ENST00000427588 175 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 RNA5SP330-201ENST00000517096 96 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 MIR6773-201ENST00000612812 74 ntBASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CNTNAP3BQ96NU0 RNU6-598P-201ENST00000364017 105 ntBASIC1.4□□□□□ -2.19
CNTNAP3BQ96NU0 RNA5SP470-201ENST00000516463 106 ntBASIC1.4□□□□□ -2.19
CNTNAP3BQ96NU0 RNA5SP268-201ENST00000516828 124 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 569.9 ms