Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MIR548AE1-201ENST00000583292 70 ntBASIC0.37□□□□□ -2.35
RTF1Q92541 MIR4773-1-201ENST00000637203 78 ntBASIC0.37□□□□□ -2.35
RTF1Q92541 Y_RNA.371-201ENST00000365591 113 ntBASIC0.36□□□□□ -2.35
RTF1Q92541 RNU6-303P-201ENST00000517091 106 ntBASIC0.36□□□□□ -2.35
RTF1Q92541 MIR4712-201ENST00000583750 82 ntBASIC0.36□□□□□ -2.35
RTF1Q92541 MIR499B-201ENST00000636498 73 ntBASIC0.36□□□□□ -2.35
RTF1Q92541 RNA5SP98-201ENST00000363158 137 ntBASIC0.35□□□□□ -2.35
RTF1Q92541 RNU6-752P-201ENST00000516376 102 ntBASIC0.35□□□□□ -2.35
RTF1Q92541 SCARNA17.3-201ENST00000516381 125 ntBASIC0.35□□□□□ -2.35
RTF1Q92541 Y_RNA.313-201ENST00000365095 103 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 RNU6-154P-201ENST00000384306 106 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 MIR516B1-201ENST00000385211 90 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 MIR652-201ENST00000385278 98 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 MIR1297-201ENST00000637311 77 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
RTF1Q92541 RNU6-1094P-201ENST00000362416 104 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 Y_RNA.185-201ENST00000363894 100 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 RNU6-127P-201ENST00000390897 107 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 RNU6-782P-201ENST00000516852 104 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.33□□□□□ -2.36
RTF1Q92541 MIR5589-201ENST00000579442 60 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
RTF1Q92541 MIR2909-201ENST00000617113 69 ntBASIC0.33□□□□□ -2.36
RTF1Q92541 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
RTF1Q92541 Y_RNA.94-201ENST00000363068 106 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 RNU6-1124P-201ENST00000384169 107 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 SNORD78.1-201ENST00000390866 65 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 MIR4636-201ENST00000582271 80 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 AC084368.1-201ENST00000620935 65 ntBASIC0.32□□□□□ -2.36
RTF1Q92541 SNORD114-29-201ENST00000364819 70 ntBASIC0.31□□□□□ -2.36
RTF1Q92541 RNU6-1039P-201ENST00000383931 107 ntBASIC0.31□□□□□ -2.36
RTF1Q92541 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.31□□□□□ -2.36
RTF1Q92541 AC074348.1-201ENST00000426503 132 ntBASIC0.31□□□□□ -2.36
RTF1Q92541 RNU6-807P-201ENST00000516805 107 ntBASIC0.31□□□□□ -2.36
RTF1Q92541 MIR20A-201ENST00000362279 71 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 RNU6-228P-201ENST00000362700 106 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 SNORA75.1-201ENST00000391130 148 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 MIR876-201ENST00000401147 81 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 AL691482.2-201ENST00000457453 84 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 MIR3925-201ENST00000584674 77 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 MIR6759-201ENST00000638110 65 ntBASIC0.3□□□□□ -2.36
RTF1Q92541 RNA5SP299-201ENST00000391203 116 ntBASIC0.29□□□□□ -2.36
RTF1Q92541 AC244090.1-201ENST00000441884 93 ntBASIC0.29□□□□□ -2.36
RTF1Q92541 Y_RNA.532-201ENST00000384590 113 ntBASIC0.27□□□□□ -2.37
RTF1Q92541 RNU7-188P-201ENST00000517063 64 ntBASIC0.27□□□□□ -2.37
RTF1Q92541 MIR6509-201ENST00000614603 85 ntBASIC0.27□□□□□ -2.37
RTF1Q92541 RNU6-260P-201ENST00000384092 107 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 RNU6-279P-201ENST00000391297 101 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 MIR1255A-201ENST00000408338 113 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 Z95118.1-201ENST00000421372 247 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 SCARNA11.2-201ENST00000517183 154 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
RTF1Q92541 SNORA42.1-201ENST00000363515 137 ntBASIC0.25□□□□□ -2.37
RTF1Q92541 MIR892B-201ENST00000401279 77 ntBASIC0.25□□□□□ -2.37
RTF1Q92541 Y_RNA.685-201ENST00000516532 108 ntBASIC0.25□□□□□ -2.37
RTF1Q92541 MIR4743-201ENST00000584576 69 ntBASIC0.25□□□□□ -2.37
RTF1Q92541 MIR643-201ENST00000385267 97 ntBASIC0.23□□□□□ -2.37
RTF1Q92541 SNORD2-201ENST00000459163 69 ntBASIC0.23□□□□□ -2.37
RTF1Q92541 RNA5SP67-201ENST00000516422 131 ntBASIC0.23□□□□□ -2.37
RTF1Q92541 MIR371B-201ENST00000638082 66 ntBASIC0.23□□□□□ -2.37
RTF1Q92541 SNORA2.1-201ENST00000363089 137 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 RNA5SP368-201ENST00000364298 116 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 MIR610-201ENST00000385139 96 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 MIR548E-201ENST00000408287 88 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 MIR3675-201ENST00000583661 73 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 MIR3657-201ENST00000584818 117 ntBASIC0.22□□□□□ -2.37
RTF1Q92541 RNU6-990P-201ENST00000364385 104 ntBASIC0.21□□□□□ -2.38
RTF1Q92541 Y_RNA.250-201ENST00000364542 110 ntBASIC0.21□□□□□ -2.38
RTF1Q92541 RNU6-24P-201ENST00000384440 107 ntBASIC0.21□□□□□ -2.38
RTF1Q92541 RNU6-175P-201ENST00000516896 107 ntBASIC0.21□□□□□ -2.38
RTF1Q92541 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
RTF1Q92541 MIR582-201ENST00000365731 98 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 SNORA8.1-201ENST00000384250 140 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 MIR548H2-201ENST00000408874 88 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 RNU6-857P-201ENST00000515893 110 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 RNU6-758P-201ENST00000516292 89 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 MIR4802-201ENST00000581881 80 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 MIR4484-201ENST00000582855 83 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 RN7SL660P-201ENST00000614852 299 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
RTF1Q92541 SNORA63.6-201ENST00000364921 119 ntBASIC0.19□□□□□ -2.38
RTF1Q92541 MIR203A-201ENST00000384836 110 ntBASIC0.19□□□□□ -2.38
RTF1Q92541 MIR106A-201ENST00000384870 81 ntBASIC0.19□□□□□ -2.38
RTF1Q92541 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.19□□□□□ -2.38
RTF1Q92541 AC104408.1-201ENST00000605241 170 ntBASIC0.19□□□□□ -2.38
RTF1Q92541 RNU6-330P-201ENST00000363015 107 ntBASIC0.18□□□□□ -2.38
RTF1Q92541 RNA5SP214-201ENST00000363378 118 ntBASIC0.18□□□□□ -2.38
RTF1Q92541 SNORA40.17-201ENST00000517256 115 ntBASIC0.18□□□□□ -2.38
RTF1Q92541 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
RTF1Q92541 SNORD114-15-201ENST00000364687 72 ntBASIC0.17□□□□□ -2.38
RTF1Q92541 RNU6-1275P-201ENST00000391087 107 ntBASIC0.17□□□□□ -2.38
RTF1Q92541 RNA5SP25-201ENST00000410815 110 ntBASIC0.17□□□□□ -2.38
RTF1Q92541 SCARNA18B-201ENST00000458806 135 ntBASIC0.17□□□□□ -2.38
RTF1Q92541 IGLVI-20-201ENST00000519296 130 ntBASIC0.17□□□□□ -2.38
RTF1Q92541 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
RTF1Q92541 SNORD114-9-201ENST00000364370 72 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms